Gene annotation
Transcriptome id Sobic.001G306800.1
Synonym TBL12, Sb01g029920
Functional annotation expressed protein
UniProt A0A0G3XUM3 , C5WTE7
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64470 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os02g02580.1 : expressed protein
MaizeGDB (Corn) Zm00025a003253
Brachypodium KQJ92926
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G306800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
2 Sobic.010G069500 zinc ion binding protein, putative, expressed -
3 Sobic.009G072033 - -
4 Sobic.001G305900 GTP binding protein, putative, expressed -
5 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.005G123400 expressed protein -
7 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
8 Sobic.008G022400 EMB2748, putative, expressed -
9 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
10 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
11 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
12 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.010G051800 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.009G186700 TraB family protein, putative, expressed -
15 Sobic.004G027200 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
16 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
17 Sobic.006G100266 - -
18 Sobic.010G143633 - -
19 Sobic.008G105600 - -
20 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4


Gene co-expression network
sample Sobic001G306800 Sobic001G306800 Sobic002G348400 Sobic002G348400 Sobic001G306800--Sobic002G348400 Sobic010G069500 Sobic010G069500 Sobic001G306800--Sobic010G069500 Sobic009G072033 Sobic009G072033 Sobic001G306800--Sobic009G072033 Sobic001G305900 Sobic001G305900 Sobic001G306800--Sobic001G305900 Sobic010G153400 Sobic010G153400 Sobic001G306800--Sobic010G153400 Sobic005G123400 Sobic005G123400 Sobic001G306800--Sobic005G123400 Sobic001G188000 Sobic001G188000 Sobic001G306800--Sobic001G188000 Sobic008G022400 Sobic008G022400 Sobic001G306800--Sobic008G022400 Sobic007G218600 Sobic007G218600 Sobic001G306800--Sobic007G218600 Sobic002G348400--Sobic010G153400 Sobic002G392400 Sobic002G392400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic002G348400--Sobic001G188000 Sobic010G069500--Sobic001G188000 Sobic004G328100 Sobic004G328100 Sobic010G069500--Sobic004G328100 Sobic003G308300 Sobic003G308300 Sobic010G069500--Sobic003G308300 Sobic004G329201 Sobic004G329201 Sobic010G069500--Sobic004G329201 Sobic002G304500 Sobic002G304500 Sobic010G069500--Sobic002G304500 Sobic002G377900 Sobic002G377900 Sobic010G069500--Sobic002G377900 Sobic003G255700 Sobic003G255700 Sobic010G069500--Sobic003G255700 Sobic010G069500--Sobic010G153400 Sobic010G069500--Sobic001G306800 Sobic008G041300 Sobic008G041300 Sobic009G072033--Sobic008G041300 Sobic009G072033--Sobic001G305900 Sobic010G051800 Sobic010G051800 Sobic009G072033--Sobic010G051800 Sobic010G062900 Sobic010G062900 Sobic009G072033--Sobic010G062900 Sobic009G072033--Sobic001G306800 Sobic002G016000 Sobic002G016000 Sobic009G072033--Sobic002G016000 Sobic005G201200 Sobic005G201200 Sobic009G072033--Sobic005G201200 Sobic009G072033--Sobic003G255700 Sobic006G100266 Sobic006G100266 Sobic009G072033--Sobic006G100266 Sobic001G305900--Sobic007G218600 Sobic001G050500 Sobic001G050500 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic009G186700 Sobic009G186700 Sobic001G305900--Sobic009G186700 Sobic001G305900--Sobic003G255700 Sobic001G305900--Sobic002G348400 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic001G305900--Sobic003G308300 Sobic010G153400--Sobic002G348400 Sobic010G153400--Sobic003G004800 Sobic010G153400--Sobic002G392400 Sobic010G153400--Sobic008G022400 Sobic001G131900 Sobic001G131900 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic006G265800 Sobic006G265800 Sobic010G153400--Sobic006G265800 Sobic010G153400--Sobic001G117900 Sobic010G153400--Sobic004G328100 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic001G188000--Sobic010G069500 Sobic002G414800 Sobic002G414800 Sobic001G188000--Sobic002G414800 Sobic001G188000--Sobic004G328100 Sobic001G188000--Sobic002G348400 Sobic001G188000--Sobic001G280500 Sobic001G188000--Sobic001G309200 Sobic002G397900 Sobic002G397900 Sobic001G188000--Sobic002G397900 Sobic001G188000--Sobic001G131900 Sobic001G188000--Sobic002G304500 Sobic008G022400--Sobic001G280500 Sobic008G022400--Sobic002G414800 Sobic002G213900 Sobic002G213900 Sobic008G022400--Sobic002G213900 Sobic010G086300 Sobic010G086300 Sobic008G022400--Sobic010G086300 Sobic008G022400--Sobic010G153400 Sobic001G384200 Sobic001G384200 Sobic008G022400--Sobic001G384200 Sobic001G387300 Sobic001G387300 Sobic008G022400--Sobic001G387300 Sobic008G022400--Sobic006G265800 Sobic008G166100 Sobic008G166100 Sobic008G022400--Sobic008G166100 Sobic007G218600--Sobic009G186700 Sobic007G218600--Sobic001G305900 Sobic007G148400 Sobic007G148400 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300
Octagon: transcription factors


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