Gene annotation
Transcriptome id Sobic.010G069500.3,Sobic.010G069500.4
Synonym Sb10g006070
Functional annotation zinc ion binding protein, putative, expressed
UniProt A0A194YHR8
Pfam PF00641 PF08325
Panther DB PTHR23153 PTHR23153:SF37
NCBI CDD KOG4842; Protein involved in sister chromatid separation and/or segregation
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G55915 : zinc ion binding
RAP-DB (Rice) LOC_Os06g09170.1 : zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a049719
Brachypodium PNT76308 , KQK19195 , KQK19194 , KQK19196 , PNT76307
Barley HORVU7Hr1G031690.1 , HORVU7Hr1G031690.3 , HORVU7Hr1G031690.4 , HORVU7Hr1G031690.5 , HORVU7Hr1G031690.6 , HORVU7Hr1G031690.7 , HORVU7Hr1G031690.2
Wheat TraesCS4D02G333700 , TraesCS7B02G058900 , TraesCS7A02G154800 , TraesCS7D02G155000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
2 Sobic.004G328100 expressed protein -
3 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
4 Sobic.004G329201 - K02260: cytochrome c oxidase assembly protein subunit 17
5 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
6 Sobic.002G377900 mitosis protein dim1, putative, expressed -
7 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.001G306800 expressed protein -
10 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
11 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
13 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
14 Sobic.004G027200 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
15 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
16 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
17 Sobic.001G305900 GTP binding protein, putative, expressed -
18 Sobic.006G038700 - -
19 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
20 Sobic.002G382100 LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic010G069500 Sobic010G069500 Sobic001G188000 Sobic001G188000 Sobic010G069500--Sobic001G188000 Sobic004G328100 Sobic004G328100 Sobic010G069500--Sobic004G328100 Sobic003G308300 Sobic003G308300 Sobic010G069500--Sobic003G308300 Sobic004G329201 Sobic004G329201 Sobic010G069500--Sobic004G329201 Sobic002G304500 Sobic002G304500 Sobic010G069500--Sobic002G304500 Sobic002G377900 Sobic002G377900 Sobic010G069500--Sobic002G377900 Sobic003G255700 Sobic003G255700 Sobic010G069500--Sobic003G255700 Sobic010G153400 Sobic010G153400 Sobic010G069500--Sobic010G153400 Sobic001G306800 Sobic001G306800 Sobic010G069500--Sobic001G306800 Sobic001G188000--Sobic010G069500 Sobic002G414800 Sobic002G414800 Sobic001G188000--Sobic002G414800 Sobic001G188000--Sobic004G328100 Sobic002G348400 Sobic002G348400 Sobic001G188000--Sobic002G348400 Sobic001G280500 Sobic001G280500 Sobic001G188000--Sobic001G280500 Sobic001G309200 Sobic001G309200 Sobic001G188000--Sobic001G309200 Sobic002G397900 Sobic002G397900 Sobic001G188000--Sobic002G397900 Sobic001G131900 Sobic001G131900 Sobic001G188000--Sobic001G131900 Sobic001G188000--Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic005G144500 Sobic005G144500 Sobic004G329201--Sobic005G144500 Sobic006G254400 Sobic006G254400 Sobic004G329201--Sobic006G254400 Sobic002G424200 Sobic002G424200 Sobic004G329201--Sobic002G424200 Sobic004G116050 Sobic004G116050 Sobic004G329201--Sobic004G116050 Sobic004G329201--Sobic002G361500 Sobic008G095633 Sobic008G095633 Sobic004G329201--Sobic008G095633 Sobic010G049700 Sobic010G049700 Sobic004G329201--Sobic010G049700 Sobic004G329201--Sobic010G198400 Sobic010G038000 Sobic010G038000 Sobic004G329201--Sobic010G038000 Sobic004G064800 Sobic004G064800 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic002G304500--Sobic008G007800 Sobic010G255400 Sobic010G255400 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic006G199500 Sobic006G199500 Sobic002G304500--Sobic006G199500 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic002G377900--Sobic004G328100 Sobic002G377900--Sobic002G304500 Sobic005G063200 Sobic005G063200 Sobic002G377900--Sobic005G063200 Sobic002G377900--Sobic004G064800 Sobic002G377900--Sobic008G007800 Sobic002G377900--Sobic001G280500 Sobic010G160300 Sobic010G160300 Sobic002G377900--Sobic010G160300 Sobic002G377900--Sobic002G348400 Sobic002G377900--Sobic008G007700 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic002G066700 Sobic002G066700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic003G255700--Sobic002G016000 Sobic001G050500 Sobic001G050500 Sobic003G255700--Sobic001G050500 Sobic003G255700--Sobic005G201200 Sobic010G153400--Sobic002G348400 Sobic003G004800 Sobic003G004800 Sobic010G153400--Sobic003G004800 Sobic002G392400 Sobic002G392400 Sobic010G153400--Sobic002G392400 Sobic008G022400 Sobic008G022400 Sobic010G153400--Sobic008G022400 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic006G265800 Sobic006G265800 Sobic010G153400--Sobic006G265800 Sobic001G117900 Sobic001G117900 Sobic010G153400--Sobic001G117900 Sobic010G153400--Sobic004G328100 Sobic001G306800--Sobic002G348400 Sobic001G306800--Sobic010G069500 Sobic009G072033 Sobic009G072033 Sobic001G306800--Sobic009G072033 Sobic001G306800--Sobic001G305900 Sobic001G306800--Sobic010G153400 Sobic005G123400 Sobic005G123400 Sobic001G306800--Sobic005G123400 Sobic001G306800--Sobic001G188000 Sobic001G306800--Sobic008G022400 Sobic001G306800--Sobic007G218600
Octagon: transcription factors


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