Gene annotation
Transcriptome id Sobic.002G382100.1
Synonym Sb02g039860
Functional annotation LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5X2J9
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64080 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g43290.1 : LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a015248 , Zm00025a048813
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.004G328100 expressed protein -
3 Sobic.010G198400 expressed protein -
4 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
5 Sobic.001G093666 - -
6 Sobic.006G038700 - -
7 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
8 Sobic.005G144500 glycosyltransferase, putative, expressed -
9 Sobic.004G020200 expressed protein -
10 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
11 Sobic.001G117701 - -
12 Sobic.009G008000 transcription factor Dp, putative, expressed -
13 Sobic.004G038500 cyclin-related protein, putative, expressed -
14 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.003G284100 expressed protein -
16 Sobic.004G329201 - K02260: cytochrome c oxidase assembly protein subunit 17
17 Sobic.008G007800 - -
18 Sobic.006G254400 expressed protein -
19 Sobic.009G048700 expressed protein -
20 Sobic.005G201200 - -


Gene co-expression network
sample Sobic002G382100 Sobic002G382100 Sobic002G361500 Sobic002G361500 Sobic002G382100--Sobic002G361500 Sobic004G328100 Sobic004G328100 Sobic002G382100--Sobic004G328100 Sobic010G198400 Sobic010G198400 Sobic002G382100--Sobic010G198400 Sobic002G424200 Sobic002G424200 Sobic002G382100--Sobic002G424200 Sobic001G093666 Sobic001G093666 Sobic002G382100--Sobic001G093666 Sobic006G038700 Sobic006G038700 Sobic002G382100--Sobic006G038700 Sobic006G199500 Sobic006G199500 Sobic002G382100--Sobic006G199500 Sobic005G144500 Sobic005G144500 Sobic002G382100--Sobic005G144500 Sobic004G020200 Sobic004G020200 Sobic002G382100--Sobic004G020200 Sobic002G361500--Sobic002G424200 Sobic009G006700 Sobic009G006700 Sobic002G361500--Sobic009G006700 Sobic002G361500--Sobic005G144500 Sobic002G361500--Sobic006G038700 Sobic002G361500--Sobic010G198400 Sobic007G219601 Sobic007G219601 Sobic002G361500--Sobic007G219601 Sobic009G008000 Sobic009G008000 Sobic002G361500--Sobic009G008000 Sobic002G361500--Sobic004G020200 Sobic006G254400 Sobic006G254400 Sobic002G361500--Sobic006G254400 Sobic002G304500 Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic004G328100--Sobic010G198400 Sobic010G198400--Sobic002G424200 Sobic010G038000 Sobic010G038000 Sobic010G198400--Sobic010G038000 Sobic010G198400--Sobic006G254400 Sobic010G198400--Sobic009G006700 Sobic009G048700 Sobic009G048700 Sobic010G198400--Sobic009G048700 Sobic010G198400--Sobic004G020200 Sobic002G243400 Sobic002G243400 Sobic010G198400--Sobic002G243400 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000 Sobic002G424200--Sobic010G198400 Sobic002G424200--Sobic009G008000 Sobic002G424200--Sobic007G219601 Sobic008G155700 Sobic008G155700 Sobic002G424200--Sobic008G155700 Sobic002G424200--Sobic009G006700 Sobic002G424200--Sobic004G020200 Sobic007G094700 Sobic007G094700 Sobic002G424200--Sobic007G094700 Sobic004G203150 Sobic004G203150 Sobic002G424200--Sobic004G203150 Sobic002G424200--Sobic006G254400 Sobic010G049700 Sobic010G049700 Sobic001G093666--Sobic010G049700 Sobic010G143633 Sobic010G143633 Sobic001G093666--Sobic010G143633 Sobic004G116050 Sobic004G116050 Sobic001G093666--Sobic004G116050 Sobic001G093666--Sobic005G144500 Sobic005G048950 Sobic005G048950 Sobic001G093666--Sobic005G048950 Sobic001G093666--Sobic002G382100 Sobic007G171700 Sobic007G171700 Sobic001G093666--Sobic007G171700 Sobic001G093666--Sobic002G361500 Sobic004G329201 Sobic004G329201 Sobic001G093666--Sobic004G329201 Sobic006G038700--Sobic009G006700 Sobic001G117701 Sobic001G117701 Sobic006G038700--Sobic001G117701 Sobic006G038700--Sobic005G201200 Sobic006G038700--Sobic002G016000 Sobic008G105600 Sobic008G105600 Sobic006G038700--Sobic008G105600 Sobic006G038700--Sobic010G143633 Sobic006G038700--Sobic002G361500 Sobic006G038700--Sobic005G144500 Sobic006G038700--Sobic010G198400 Sobic006G199500--Sobic009G048700 Sobic006G199500--Sobic009G008000 Sobic002G097200 Sobic002G097200 Sobic006G199500--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic006G199500--Sobic001G417700 Sobic009G145000 Sobic009G145000 Sobic006G199500--Sobic009G145000 Sobic006G199500--Sobic002G243400 Sobic006G199500--Sobic004G020200 Sobic001G136000 Sobic001G136000 Sobic006G199500--Sobic001G136000 Sobic006G199500--Sobic008G155700 Sobic006G064450 Sobic006G064450 Sobic005G144500--Sobic006G064450 Sobic005G144500--Sobic007G219601 Sobic005G144500--Sobic007G094700 Sobic005G144500--Sobic008G155700 Sobic005G144500--Sobic009G006700 Sobic003G133600 Sobic003G133600 Sobic005G144500--Sobic003G133600 Sobic005G144500--Sobic004G203150 Sobic005G144500--Sobic010G049700 Sobic005G144500--Sobic010G038000 Sobic004G020200--Sobic001G417700 Sobic004G020200--Sobic009G008000 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic004G020200--Sobic007G219601 Sobic004G020200--Sobic001G136000 Sobic004G020200--Sobic008G155700 Sobic002G418300 Sobic002G418300 Sobic004G020200--Sobic002G418300 Sobic004G020200--Sobic009G145000
Octagon: transcription factors


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