Gene annotation
Transcriptome id Sobic.001G025700.1
Synonym Sb01g002450
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5WU10
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF341
NCBI CDD KOG0700; Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
KEGG Orthology K01102; pyruvate dehydrogenase phosphatase
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT3G17090 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os03g61690.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a008912
Brachypodium PNT73851 , KQK12321 , KQK12320
Barley HORVU5Hr1G116750.1 , HORVU4Hr1G020150.2 , HORVU4Hr1G069380.4 , HORVU4Hr1G069380.1 , HORVU4Hr1G069380.3 , HORVU5Hr1G116740.1
Wheat TraesCS4A02G050000 , TraesCS5D02G510100 , TraesCS5B02G510000 , TraesCS4B02G254700 , TraesCS4A02G363400 , TraesCS4D02G254500
Populus -


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cDNA sequences
Sobic.001G025700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
2 Sobic.008G013200 expressed protein -
3 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
4 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
5 Sobic.004G328100 expressed protein -
6 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
7 Sobic.009G186700 TraB family protein, putative, expressed -
8 Sobic.010G069500 zinc ion binding protein, putative, expressed -
9 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
10 Sobic.006G100266 - -
11 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
12 Sobic.002G377900 mitosis protein dim1, putative, expressed -
13 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
15 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
16 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
17 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
18 Sobic.008G116700 expressed protein -
19 Sobic.001G306800 expressed protein -
20 Sobic.002G066700 OsFBL33 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic001G025700 Sobic001G025700 Sobic003G308300 Sobic003G308300 Sobic001G025700--Sobic003G308300 Sobic008G013200 Sobic008G013200 Sobic001G025700--Sobic008G013200 Sobic003G255700 Sobic003G255700 Sobic001G025700--Sobic003G255700 Sobic007G153500 Sobic007G153500 Sobic001G025700--Sobic007G153500 Sobic004G328100 Sobic004G328100 Sobic001G025700--Sobic004G328100 Sobic002G348400 Sobic002G348400 Sobic001G025700--Sobic002G348400 Sobic009G186700 Sobic009G186700 Sobic001G025700--Sobic009G186700 Sobic010G069500 Sobic010G069500 Sobic001G025700--Sobic010G069500 Sobic007G148400 Sobic007G148400 Sobic001G025700--Sobic007G148400 Sobic003G308300--Sobic003G255700 Sobic003G308300--Sobic008G013200 Sobic003G308300--Sobic009G186700 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic008G013200--Sobic003G308300 Sobic002G016000 Sobic002G016000 Sobic008G013200--Sobic002G016000 Sobic008G013200--Sobic003G255700 Sobic005G201200 Sobic005G201200 Sobic008G013200--Sobic005G201200 Sobic002G066700 Sobic002G066700 Sobic008G013200--Sobic002G066700 Sobic002G304500 Sobic002G304500 Sobic008G013200--Sobic002G304500 Sobic002G158300 Sobic002G158300 Sobic008G013200--Sobic002G158300 Sobic008G013200--Sobic004G328100 Sobic006G038700 Sobic006G038700 Sobic008G013200--Sobic006G038700 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic003G255700--Sobic002G016000 Sobic001G050500 Sobic001G050500 Sobic003G255700--Sobic001G050500 Sobic003G255700--Sobic005G201200 Sobic002G076500 Sobic002G076500 Sobic007G153500--Sobic002G076500 Sobic002G322400 Sobic002G322400 Sobic007G153500--Sobic002G322400 Sobic001G114200 Sobic001G114200 Sobic007G153500--Sobic001G114200 Sobic002G392400 Sobic002G392400 Sobic007G153500--Sobic002G392400 Sobic005G087300 Sobic005G087300 Sobic007G153500--Sobic005G087300 Sobic003G393200 Sobic003G393200 Sobic007G153500--Sobic003G393200 Sobic007G153500--Sobic001G025700 Sobic001G455000 Sobic001G455000 Sobic007G153500--Sobic001G455000 Sobic007G153500--Sobic009G186700 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic010G153400 Sobic010G153400 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic002G348400--Sobic007G086600 Sobic001G117900 Sobic001G117900 Sobic002G348400--Sobic001G117900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000 Sobic009G186700--Sobic007G218600 Sobic009G186700--Sobic003G255700 Sobic009G186700--Sobic001G305900 Sobic009G186700--Sobic003G308300 Sobic009G186700--Sobic001G050500 Sobic009G186700--Sobic001G114200 Sobic009G186700--Sobic001G280500 Sobic009G186700--Sobic008G013200 Sobic009G186700--Sobic007G148400 Sobic010G069500--Sobic001G188000 Sobic010G069500--Sobic004G328100 Sobic010G069500--Sobic003G308300 Sobic004G329201 Sobic004G329201 Sobic010G069500--Sobic004G329201 Sobic010G069500--Sobic002G304500 Sobic010G069500--Sobic002G377900 Sobic010G069500--Sobic003G255700 Sobic010G069500--Sobic010G153400 Sobic001G306800 Sobic001G306800 Sobic010G069500--Sobic001G306800 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic007G148400--Sobic009G186700 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800
Octagon: transcription factors


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