Gene annotation
Transcriptome id Sobic.001G443900.1
Synonym PTR2, Sb01g041710, PTR2-B, ATPTR2, NTR1, ATPTR2-B
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5WRN0
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF153
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G02040 : peptide transporter 2
RAP-DB (Rice) LOC_Os03g13250.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a001471
Brachypodium KQK22690 , KQK22693
Barley HORVU4Hr1G064810.9 , HORVU4Hr1G064810.8 , HORVU4Hr1G064810.7 , HORVU4Hr1G064810.6 , HORVU4Hr1G064810.3 , HORVU4Hr1G064810.1 , HORVU4Hr1G064810.12 , HORVU4Hr1G064810.11 , HORVU4Hr1G064810.10 , HORVU4Hr1G064810.5 , HORVU4Hr1G064810.4 , HORVU4Hr1G064810.2
Wheat TraesCS4A02G075900 , TraesCS4B02G231700 , TraesCS4D02G233000 , TraesCS4D02G233000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
2 Sobic.009G121100 expressed protein -
3 Sobic.003G005800 salt stress root protein RS1, putative, expressed -
4 Sobic.001G373200 lipase precursor, putative, expressed -
5 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
6 Sobic.006G138400 regulatory subunit, putative, expressed -
7 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
8 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
9 Sobic.009G229800 Uncharacterized gene family(PubMedID : 29126242)@"Causal gene for dw1, a putative membrane protein of unknown function"(PubMedID : 26963094)@expressed protein -
10 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
12 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
13 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
14 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
15 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
16 Sobic.001G159700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
17 Sobic.003G401200 selenium-binding protein, putative, expressed K17285: methanethiol oxidase
18 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
19 Sobic.002G179900 ABC transporter, ATP-binding protein, putative, expressed -
20 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family


Gene co-expression network
sample Sobic001G443900 Sobic001G443900 Sobic006G214500 Sobic006G214500 Sobic001G443900--Sobic006G214500 Sobic009G121100 Sobic009G121100 Sobic001G443900--Sobic009G121100 Sobic003G005800 Sobic003G005800 Sobic001G443900--Sobic003G005800 Sobic001G373200 Sobic001G373200 Sobic001G443900--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic001G443900--Sobic003G407300 Sobic006G138400 Sobic006G138400 Sobic001G443900--Sobic006G138400 Sobic001G447500 Sobic001G447500 Sobic001G443900--Sobic001G447500 Sobic001G156100 Sobic001G156100 Sobic001G443900--Sobic001G156100 Sobic009G229800 Sobic009G229800 Sobic001G443900--Sobic009G229800 Sobic006G214500--Sobic009G121100 Sobic006G214500--Sobic001G443900 Sobic003G408500 Sobic003G408500 Sobic006G214500--Sobic003G408500 Sobic008G160700 Sobic008G160700 Sobic006G214500--Sobic008G160700 Sobic010G078100 Sobic010G078100 Sobic006G214500--Sobic010G078100 Sobic006G214500--Sobic001G156100 Sobic006G214500--Sobic003G407300 Sobic006G214500--Sobic001G447500 Sobic009G249200 Sobic009G249200 Sobic006G214500--Sobic009G249200 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic009G121100--Sobic001G156100 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic009G121100--Sobic010G078100 Sobic004G295800 Sobic004G295800 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic002G188500 Sobic002G188500 Sobic003G005800--Sobic002G188500 Sobic003G005800--Sobic001G443900 Sobic009G235900 Sobic009G235900 Sobic003G005800--Sobic009G235900 Sobic003G005800--Sobic008G160700 Sobic004G037900 Sobic004G037900 Sobic003G005800--Sobic004G037900 Sobic003G005800--Sobic006G138400 Sobic001G194900 Sobic001G194900 Sobic003G005800--Sobic001G194900 Sobic003G005800--Sobic009G121100 Sobic003G005800--Sobic006G214500 Sobic001G373200--Sobic003G407300 Sobic001G373200--Sobic009G121100 Sobic001G373200--Sobic003G019100 Sobic001G373200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic001G373200--Sobic007G024700 Sobic001G373200--Sobic006G214500 Sobic002G179900 Sobic002G179900 Sobic001G373200--Sobic002G179900 Sobic001G373200--Sobic001G156100 Sobic001G373200--Sobic009G249200 Sobic003G407300--Sobic009G121100 Sobic003G407300--Sobic001G373200 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic003G407300--Sobic004G295800 Sobic003G407300--Sobic009G229800 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic006G138400--Sobic006G214500 Sobic006G138400--Sobic003G408500 Sobic006G138400--Sobic009G121100 Sobic002G046800 Sobic002G046800 Sobic006G138400--Sobic002G046800 Sobic006G138400--Sobic003G407300 Sobic010G001500 Sobic010G001500 Sobic006G138400--Sobic010G001500 Sobic008G009900 Sobic008G009900 Sobic006G138400--Sobic008G009900 Sobic006G138400--Sobic007G024700 Sobic006G138400--Sobic003G005800 Sobic001G447500--Sobic001G156100 Sobic001G447500--Sobic006G214500 Sobic003G329400 Sobic003G329400 Sobic001G447500--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic001G447500--Sobic003G148800 Sobic008G062200 Sobic008G062200 Sobic001G447500--Sobic008G062200 Sobic007G219900 Sobic007G219900 Sobic001G447500--Sobic007G219900 Sobic001G447500--Sobic003G407300 Sobic001G447500--Sobic009G121100 Sobic001G447500--Sobic001G443900 Sobic001G156100--Sobic009G121100 Sobic001G156100--Sobic001G447500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic001G156100--Sobic009G229800 Sobic001G156100--Sobic008G160700 Sobic009G027000 Sobic009G027000 Sobic001G156100--Sobic009G027000 Sobic001G156100--Sobic001G373200 Sobic001G156100--Sobic004G295800 Sobic009G229800--Sobic003G407300 Sobic009G229800--Sobic001G156100 Sobic004G060900 Sobic004G060900 Sobic009G229800--Sobic004G060900 Sobic009G229800--Sobic001G373200 Sobic009G229800--Sobic009G121100 Sobic009G229800--Sobic001G443900 Sobic002G419800 Sobic002G419800 Sobic009G229800--Sobic002G419800 Sobic009G057300 Sobic009G057300 Sobic009G229800--Sobic009G057300 Sobic007G172400 Sobic007G172400 Sobic009G229800--Sobic007G172400
Octagon: transcription factors


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