Gene annotation
Transcriptome id Sobic.007G216900.1
Synonym Sb07g028330
Functional annotation coiled-coil domain containing 49, putative, expressed
UniProt C5YJ72
Pfam PF12542 PF10197
Panther DB PTHR16196
NCBI CDD KOG3869; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44200 : CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
RAP-DB (Rice) LOC_Os08g39090.1 : coiled-coil domain containing 49, putative, expressed
MaizeGDB (Corn) Zm00025a005010 , Zm00025a004085
Brachypodium -
Barley HORVU7Hr1G049250.3 , HORVU7Hr1G049250.2 , HORVU7Hr1G049250.1 , HORVU7Hr1G049250.7 , HORVU7Hr1G049250.6 , HORVU7Hr1G049250.5 , HORVU7Hr1G049250.4 , HORVU7Hr1G049250.9 , HORVU7Hr1G049250.8 , HORVU7Hr1G049250.11 , HORVU7Hr1G049250.10
Wheat TraesCS7A02G241700 , TraesCS7D02G240700 , TraesCS7B02G137300 , TraesCS7B02G137300
Populus -


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cDNA sequences
Sobic.007G216900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
2 Sobic.005G059100 bromodomain domain containing protein, expressed -
3 Sobic.002G341100 bromodomain domain containing protein, expressed -
4 Sobic.002G347700 expressed protein -
5 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
6 Sobic.002G067800 - -
7 Sobic.001G041400 PAPA-1-like conserved region family protein, expressed -
8 Sobic.010G197800 expressed protein -
9 Sobic.007G043500 DNA topoisomerase 1, putative, expressed K03163: DNA topoisomerase I
10 Sobic.004G332300 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.010G040800 RNA recognition motif containing protein, putative, expressed -
12 Sobic.004G213000 AT hook motif family protein, expressed -
13 Sobic.004G237100 AP2/EREBP transcription factor BABY BOOM, putative, expressed -
14 Sobic.003G073000 IWS1 C-terminus family protein, putative, expressed K17498: SPN1, transcription factor SPN1
15 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
16 Sobic.002G224700 NFKB, putative, expressed -
17 Sobic.008G165100 G-patch domain containing protein, putative, expressed K13103: tuftelin-interacting protein 11
18 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
19 Sobic.005G143400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.008G106000 eukaryotic translation initiation factor 5B, putative, expressed K03243: translation initiation factor 5B


Gene co-expression network
sample Sobic007G216900 Sobic007G216900 Sobic007G155900 Sobic007G155900 Sobic007G216900--Sobic007G155900 Sobic005G059100 Sobic005G059100 Sobic007G216900--Sobic005G059100 Sobic002G341100 Sobic002G341100 Sobic007G216900--Sobic002G341100 Sobic002G347700 Sobic002G347700 Sobic007G216900--Sobic002G347700 Sobic010G194700 Sobic010G194700 Sobic007G216900--Sobic010G194700 Sobic002G067800 Sobic002G067800 Sobic007G216900--Sobic002G067800 Sobic001G041400 Sobic001G041400 Sobic007G216900--Sobic001G041400 Sobic010G197800 Sobic010G197800 Sobic007G216900--Sobic010G197800 Sobic007G043500 Sobic007G043500 Sobic007G216900--Sobic007G043500 Sobic007G155900--Sobic007G216900 Sobic007G155900--Sobic002G347700 Sobic007G155900--Sobic002G341100 Sobic001G063100 Sobic001G063100 Sobic007G155900--Sobic001G063100 Sobic007G155900--Sobic002G067800 Sobic006G120400 Sobic006G120400 Sobic007G155900--Sobic006G120400 Sobic002G164400 Sobic002G164400 Sobic007G155900--Sobic002G164400 Sobic008G165100 Sobic008G165100 Sobic007G155900--Sobic008G165100 Sobic002G095700 Sobic002G095700 Sobic007G155900--Sobic002G095700 Sobic005G059100--Sobic007G043500 Sobic007G026000 Sobic007G026000 Sobic005G059100--Sobic007G026000 Sobic006G123900 Sobic006G123900 Sobic005G059100--Sobic006G123900 Sobic005G059100--Sobic002G067800 Sobic005G059100--Sobic010G194700 Sobic006G080300 Sobic006G080300 Sobic005G059100--Sobic006G080300 Sobic007G185900 Sobic007G185900 Sobic005G059100--Sobic007G185900 Sobic001G206100 Sobic001G206100 Sobic005G059100--Sobic001G206100 Sobic002G159200 Sobic002G159200 Sobic005G059100--Sobic002G159200 Sobic001G033400 Sobic001G033400 Sobic002G341100--Sobic001G033400 Sobic002G341100--Sobic001G041400 Sobic006G278200 Sobic006G278200 Sobic002G341100--Sobic006G278200 Sobic002G341100--Sobic002G095700 Sobic002G341100--Sobic002G067800 Sobic003G035500 Sobic003G035500 Sobic002G341100--Sobic003G035500 Sobic008G073000 Sobic008G073000 Sobic002G341100--Sobic008G073000 Sobic004G256200 Sobic004G256200 Sobic002G341100--Sobic004G256200 Sobic002G341100--Sobic006G120400 Sobic002G362300 Sobic002G362300 Sobic002G347700--Sobic002G362300 Sobic008G129700 Sobic008G129700 Sobic002G347700--Sobic008G129700 Sobic002G347700--Sobic007G155900 Sobic002G177400 Sobic002G177400 Sobic002G347700--Sobic002G177400 Sobic009G044900 Sobic009G044900 Sobic002G347700--Sobic009G044900 Sobic005G030300 Sobic005G030300 Sobic002G347700--Sobic005G030300 Sobic010G202600 Sobic010G202600 Sobic002G347700--Sobic010G202600 Sobic002G224700 Sobic002G224700 Sobic002G347700--Sobic002G224700 Sobic010G211300 Sobic010G211300 Sobic002G347700--Sobic010G211300 Sobic010G194700--Sobic002G067800 Sobic010G194700--Sobic001G206100 Sobic010G194700--Sobic008G165100 Sobic002G151600 Sobic002G151600 Sobic010G194700--Sobic002G151600 Sobic004G213000 Sobic004G213000 Sobic010G194700--Sobic004G213000 Sobic010G194700--Sobic005G059100 Sobic006G013500 Sobic006G013500 Sobic010G194700--Sobic006G013500 Sobic005G079800 Sobic005G079800 Sobic010G194700--Sobic005G079800 Sobic003G197800 Sobic003G197800 Sobic010G194700--Sobic003G197800 Sobic002G067800--Sobic010G194700 Sobic002G067800--Sobic008G165100 Sobic002G067800--Sobic005G059100 Sobic002G067800--Sobic002G095700 Sobic002G067800--Sobic008G073000 Sobic002G067800--Sobic002G159200 Sobic003G355000 Sobic003G355000 Sobic002G067800--Sobic003G355000 Sobic002G067800--Sobic007G043500 Sobic002G067800--Sobic006G123900 Sobic007G078300 Sobic007G078300 Sobic001G041400--Sobic007G078300 Sobic001G041400--Sobic002G341100 Sobic001G041400--Sobic001G033400 Sobic001G042800 Sobic001G042800 Sobic001G041400--Sobic001G042800 Sobic003G022200 Sobic003G022200 Sobic001G041400--Sobic003G022200 Sobic004G329800 Sobic004G329800 Sobic001G041400--Sobic004G329800 Sobic001G041400--Sobic003G035500 Sobic010G152200 Sobic010G152200 Sobic001G041400--Sobic010G152200 Sobic001G041400--Sobic002G067800 Sobic007G050300 Sobic007G050300 Sobic010G197800--Sobic007G050300 Sobic006G051900 Sobic006G051900 Sobic010G197800--Sobic006G051900 Sobic001G335500 Sobic001G335500 Sobic010G197800--Sobic001G335500 Sobic007G210300 Sobic007G210300 Sobic010G197800--Sobic007G210300 Sobic003G253400 Sobic003G253400 Sobic010G197800--Sobic003G253400 Sobic010G197800--Sobic002G224700 Sobic006G276000 Sobic006G276000 Sobic010G197800--Sobic006G276000 Sobic005G032400 Sobic005G032400 Sobic010G197800--Sobic005G032400 Sobic006G120800 Sobic006G120800 Sobic010G197800--Sobic006G120800 Sobic007G043500--Sobic005G059100 Sobic007G043500--Sobic002G159200 Sobic007G043500--Sobic006G123900 Sobic007G043500--Sobic002G067800 Sobic007G043500--Sobic010G194700 Sobic001G405300 Sobic001G405300 Sobic007G043500--Sobic001G405300 Sobic007G043500--Sobic008G073000 Sobic007G043500--Sobic006G080300 Sobic008G106000 Sobic008G106000 Sobic007G043500--Sobic008G106000
Octagon: transcription factors


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