Gene annotation
Transcriptome id Sobic.009G209100.2
Synonym Sb09g026550
Functional annotation plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed
UniProt A0A1B6P9M6
Pfam PF09598 PF04774
Panther DB PTHR12299 PTHR12299:SF27
NCBI CDD KOG2945; Predicted RNA-binding protein
KEGG Orthology K13199; plasminogen activator inhibitor 1 RNA-binding protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17520 : Hyaluronan / mRNA binding family
RAP-DB (Rice) LOC_Os05g45660.2 : plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a027773 , Zm00025a027769
Brachypodium KQK05232
Barley HORVU1Hr1G080980.2 , HORVU1Hr1G080980.3 , HORVU1Hr1G080980.1 , HORVU1Hr1G080980.4
Wheat TraesCS1A02G354700 , TraesCS1D02G355800 , TraesCS1B02G367100
Populus -


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cDNA sequences
Sobic.009G209100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G132900 expressed protein -
2 Sobic.001G280400 ankyrin repeat domain-containing protein 28, putative, expressed -
3 Sobic.004G136500 - -
4 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
5 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
6 Sobic.001G008800 expressed protein -
7 Sobic.004G173100 exosome complex exonuclease, putative, expressed K03678: RRP45, exosome complex component RRP45
8 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
9 Sobic.003G117300 LSM domain containing protein, expressed K12623: U6 snRNA-associated Sm-like protein LSm4
10 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
11 Sobic.007G117500 stromal cell-derived factor 2-like protein precursor, putative, expressed -
12 Sobic.004G130200 ribosome biogenesis protein NEP1, putative, expressed K14568: EMG1, rRNA small subunit pseudouridine methyltransferase Nep1
13 Sobic.004G124100 EMB1303, putative, expressed -
14 Sobic.004G117800 Ser/Thr protein phosphatase family protein, putative, expressed K18467: vacuolar protein sorting-associated protein 29
15 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
16 Sobic.008G118600 riboflavin synthase alpha chain, putative, expressed K00793: ribE, riboflavin synthase
17 Sobic.006G281200 csAtPR5, putative, expressed -
18 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
19 Sobic.002G209400 transcription initiation factor TFIID subunit 10, putative, expressed K03134: transcription initiation factor TFIID subunit 10
20 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G


Gene co-expression network
sample Sobic009G209100 Sobic009G209100 Sobic001G132900 Sobic001G132900 Sobic009G209100--Sobic001G132900 Sobic001G280400 Sobic001G280400 Sobic009G209100--Sobic001G280400 Sobic004G136500 Sobic004G136500 Sobic009G209100--Sobic004G136500 Sobic003G003000 Sobic003G003000 Sobic009G209100--Sobic003G003000 Sobic008G103900 Sobic008G103900 Sobic009G209100--Sobic008G103900 Sobic001G008800 Sobic001G008800 Sobic009G209100--Sobic001G008800 Sobic004G173100 Sobic004G173100 Sobic009G209100--Sobic004G173100 Sobic009G130400 Sobic009G130400 Sobic009G209100--Sobic009G130400 Sobic003G117300 Sobic003G117300 Sobic009G209100--Sobic003G117300 Sobic001G132900--Sobic003G003000 Sobic001G132900--Sobic001G008800 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G136500 Sobic001G136500 Sobic001G132900--Sobic001G136500 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic005G164500 Sobic005G164500 Sobic001G280400--Sobic005G164500 Sobic001G280400--Sobic004G117800 Sobic008G051100 Sobic008G051100 Sobic001G280400--Sobic008G051100 Sobic005G100900 Sobic005G100900 Sobic001G280400--Sobic005G100900 Sobic001G099800 Sobic001G099800 Sobic001G280400--Sobic001G099800 Sobic003G209400 Sobic003G209400 Sobic001G280400--Sobic003G209400 Sobic004G027000 Sobic004G027000 Sobic001G280400--Sobic004G027000 Sobic001G280400--Sobic004G136500 Sobic001G280400--Sobic001G132900 Sobic004G136500--Sobic001G008800 Sobic004G074300 Sobic004G074300 Sobic004G136500--Sobic004G074300 Sobic004G136500--Sobic004G117800 Sobic001G119900 Sobic001G119900 Sobic004G136500--Sobic001G119900 Sobic002G209400 Sobic002G209400 Sobic004G136500--Sobic002G209400 Sobic006G272200 Sobic006G272200 Sobic004G136500--Sobic006G272200 Sobic010G085200 Sobic010G085200 Sobic004G136500--Sobic010G085200 Sobic004G136500--Sobic001G132900 Sobic004G136500--Sobic001G280400 Sobic003G003000--Sobic001G129400 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic003G003000--Sobic010G018000 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic007G034400 Sobic007G034400 Sobic008G103900--Sobic007G034400 Sobic010G013900 Sobic010G013900 Sobic008G103900--Sobic010G013900 Sobic001G202400 Sobic001G202400 Sobic008G103900--Sobic001G202400 Sobic004G248900 Sobic004G248900 Sobic008G103900--Sobic004G248900 Sobic008G103900--Sobic009G130400 Sobic002G179000 Sobic002G179000 Sobic008G103900--Sobic002G179000 Sobic008G103900--Sobic010G018000 Sobic003G015400 Sobic003G015400 Sobic008G103900--Sobic003G015400 Sobic007G143000 Sobic007G143000 Sobic008G103900--Sobic007G143000 Sobic001G008800--Sobic001G129400 Sobic003G326900 Sobic003G326900 Sobic001G008800--Sobic003G326900 Sobic001G008800--Sobic001G132900 Sobic001G008800--Sobic003G003000 Sobic001G008800--Sobic004G136500 Sobic001G008800--Sobic004G117800 Sobic001G144600 Sobic001G144600 Sobic001G008800--Sobic001G144600 Sobic006G087400 Sobic006G087400 Sobic001G008800--Sobic006G087400 Sobic001G451901 Sobic001G451901 Sobic001G008800--Sobic001G451901 Sobic009G071700 Sobic009G071700 Sobic004G173100--Sobic009G071700 Sobic006G251600 Sobic006G251600 Sobic004G173100--Sobic006G251600 Sobic003G425100 Sobic003G425100 Sobic004G173100--Sobic003G425100 Sobic002G262100 Sobic002G262100 Sobic004G173100--Sobic002G262100 Sobic006G198600 Sobic006G198600 Sobic004G173100--Sobic006G198600 Sobic002G399200 Sobic002G399200 Sobic004G173100--Sobic002G399200 Sobic003G407600 Sobic003G407600 Sobic004G173100--Sobic003G407600 Sobic004G173100--Sobic005G100900 Sobic008G163500 Sobic008G163500 Sobic004G173100--Sobic008G163500 Sobic009G130400--Sobic001G404100 Sobic001G096100 Sobic001G096100 Sobic009G130400--Sobic001G096100 Sobic009G130400--Sobic006G281200 Sobic008G058300 Sobic008G058300 Sobic009G130400--Sobic008G058300 Sobic009G130400--Sobic010G013900 Sobic003G028100 Sobic003G028100 Sobic009G130400--Sobic003G028100 Sobic001G502200 Sobic001G502200 Sobic009G130400--Sobic001G502200 Sobic002G341800 Sobic002G341800 Sobic009G130400--Sobic002G341800 Sobic009G130400--Sobic004G248900 Sobic004G060600 Sobic004G060600 Sobic003G117300--Sobic004G060600 Sobic001G428100 Sobic001G428100 Sobic003G117300--Sobic001G428100 Sobic002G071000 Sobic002G071000 Sobic003G117300--Sobic002G071000 Sobic003G117300--Sobic001G404100 Sobic002G262000 Sobic002G262000 Sobic003G117300--Sobic002G262000 Sobic001G501200 Sobic001G501200 Sobic003G117300--Sobic001G501200 Sobic003G117300--Sobic009G130400 Sobic003G117300--Sobic006G281200 Sobic003G077900 Sobic003G077900 Sobic003G117300--Sobic003G077900
Octagon: transcription factors


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