Gene annotation
Transcriptome id Sobic.003G244300.1
Synonym Sb03g030080
Functional annotation C2 domain containing protein, putative, expressed
UniProt C5XFC1
Pfam -
Panther DB PTHR32246 PTHR32246:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01200 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os01g47040.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a038715 , Zm00025a028173
Brachypodium KQK09024
Barley HORVU3Hr1G059440.4 , HORVU3Hr1G059440.6 , HORVU3Hr1G059440.3 , HORVU3Hr1G059440.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G325200 60S ribosome subunit biogenesis protein NIP7, putative, expressed K07565: 60S ribosome subunit biogenesis protein NIP7
2 Sobic.008G094600 - -
3 Sobic.004G247200 erwinia induced protein 2, putative, expressed -
4 Sobic.008G100000 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
5 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
6 Sobic.010G230700 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
7 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
8 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
9 Sobic.005G019700 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
10 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
11 Sobic.007G190800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17780: mitochondrial import inner membrane translocase subunit TIM8
12 Sobic.006G262300 expressed protein -
13 Sobic.004G145801 - K02978: RP-S27e, small subunit ribosomal protein S27e
14 Sobic.003G268200 VIP1 protein, putative, expressed -
15 Sobic.004G002350 - K11088: SNRPD3, small nuclear ribonucleoprotein D3
16 Sobic.004G198400 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
17 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
18 Sobic.002G056200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
19 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
20 Sobic.001G011200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta


Gene co-expression network
sample Sobic003G244300 Sobic003G244300 Sobic004G325200 Sobic004G325200 Sobic003G244300--Sobic004G325200 Sobic008G094600 Sobic008G094600 Sobic003G244300--Sobic008G094600 Sobic004G247200 Sobic004G247200 Sobic003G244300--Sobic004G247200 Sobic008G100000 Sobic008G100000 Sobic003G244300--Sobic008G100000 Sobic008G098800 Sobic008G098800 Sobic003G244300--Sobic008G098800 Sobic010G230700 Sobic010G230700 Sobic003G244300--Sobic010G230700 Sobic002G372400 Sobic002G372400 Sobic003G244300--Sobic002G372400 Sobic006G201500 Sobic006G201500 Sobic003G244300--Sobic006G201500 Sobic005G019700 Sobic005G019700 Sobic003G244300--Sobic005G019700 Sobic010G054200 Sobic010G054200 Sobic004G325200--Sobic010G054200 Sobic004G325200--Sobic008G100000 Sobic004G325200--Sobic003G244300 Sobic006G081100 Sobic006G081100 Sobic004G325200--Sobic006G081100 Sobic001G225700 Sobic001G225700 Sobic004G325200--Sobic001G225700 Sobic006G115000 Sobic006G115000 Sobic004G325200--Sobic006G115000 Sobic003G268200 Sobic003G268200 Sobic004G325200--Sobic003G268200 Sobic003G073900 Sobic003G073900 Sobic004G325200--Sobic003G073900 Sobic001G510800 Sobic001G510800 Sobic004G325200--Sobic001G510800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic001G058900 Sobic001G058900 Sobic008G094600--Sobic001G058900 Sobic003G129800 Sobic003G129800 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G094600--Sobic008G100000 Sobic001G513500 Sobic001G513500 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300 Sobic003G063200 Sobic003G063200 Sobic004G247200--Sobic003G063200 Sobic005G028700 Sobic005G028700 Sobic004G247200--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic004G247200--Sobic004G259600 Sobic001G055600 Sobic001G055600 Sobic004G247200--Sobic001G055600 Sobic010G204600 Sobic010G204600 Sobic004G247200--Sobic010G204600 Sobic004G065500 Sobic004G065500 Sobic004G247200--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic004G247200--Sobic009G183300 Sobic001G067601 Sobic001G067601 Sobic004G247200--Sobic001G067601 Sobic002G348100 Sobic002G348100 Sobic004G247200--Sobic002G348100 Sobic008G100000--Sobic008G098800 Sobic008G100000--Sobic001G510800 Sobic008G100000--Sobic001G058900 Sobic008G100000--Sobic008G094600 Sobic004G002350 Sobic004G002350 Sobic008G100000--Sobic004G002350 Sobic010G005300 Sobic010G005300 Sobic008G100000--Sobic010G005300 Sobic002G286900 Sobic002G286900 Sobic008G100000--Sobic002G286900 Sobic002G304900 Sobic002G304900 Sobic008G100000--Sobic002G304900 Sobic008G108601 Sobic008G108601 Sobic008G100000--Sobic008G108601 Sobic008G098800--Sobic001G058900 Sobic002G049300 Sobic002G049300 Sobic008G098800--Sobic002G049300 Sobic009G233400 Sobic009G233400 Sobic008G098800--Sobic009G233400 Sobic010G069400 Sobic010G069400 Sobic008G098800--Sobic010G069400 Sobic008G098800--Sobic006G201500 Sobic008G098800--Sobic002G304900 Sobic001G377800 Sobic001G377800 Sobic008G098800--Sobic001G377800 Sobic005G050500 Sobic005G050500 Sobic008G098800--Sobic005G050500 Sobic003G280700 Sobic003G280700 Sobic008G098800--Sobic003G280700 Sobic010G230700--Sobic005G019700 Sobic007G018300 Sobic007G018300 Sobic010G230700--Sobic007G018300 Sobic004G104100 Sobic004G104100 Sobic010G230700--Sobic004G104100 Sobic009G054800 Sobic009G054800 Sobic010G230700--Sobic009G054800 Sobic006G221200 Sobic006G221200 Sobic010G230700--Sobic006G221200 Sobic009G050300 Sobic009G050300 Sobic010G230700--Sobic009G050300 Sobic001G091801 Sobic001G091801 Sobic010G230700--Sobic001G091801 Sobic007G019000 Sobic007G019000 Sobic010G230700--Sobic007G019000 Sobic010G230700--Sobic002G372400 Sobic003G078200 Sobic003G078200 Sobic002G372400--Sobic003G078200 Sobic002G372400--Sobic009G054800 Sobic010G076400 Sobic010G076400 Sobic002G372400--Sobic010G076400 Sobic002G372400--Sobic010G230700 Sobic002G372400--Sobic007G018300 Sobic002G372400--Sobic005G019700 Sobic002G372400--Sobic009G223300 Sobic002G372400--Sobic009G050300 Sobic004G198400 Sobic004G198400 Sobic002G372400--Sobic004G198400 Sobic002G115000 Sobic002G115000 Sobic006G201500--Sobic002G115000 Sobic001G085400 Sobic001G085400 Sobic006G201500--Sobic001G085400 Sobic006G201500--Sobic009G233400 Sobic010G166100 Sobic010G166100 Sobic006G201500--Sobic010G166100 Sobic006G201500--Sobic007G019000 Sobic006G201500--Sobic010G069400 Sobic006G201500--Sobic001G058900 Sobic006G201500--Sobic008G098800 Sobic003G249700 Sobic003G249700 Sobic006G201500--Sobic003G249700 Sobic005G019700--Sobic010G230700 Sobic005G019700--Sobic009G050300 Sobic005G019700--Sobic007G018300 Sobic005G019700--Sobic009G054800 Sobic006G116700 Sobic006G116700 Sobic005G019700--Sobic006G116700 Sobic005G019700--Sobic001G091801 Sobic007G197800 Sobic007G197800 Sobic005G019700--Sobic007G197800 Sobic005G019700--Sobic003G078200 Sobic010G206200 Sobic010G206200 Sobic005G019700--Sobic010G206200
Octagon: transcription factors


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