Gene annotation
Transcriptome id Sobic.001G475701.1
Synonym -
Functional annotation -
UniProt A0A1Z5SAZ3
Pfam PF05678
Panther DB PTHR33783 PTHR33783:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78310 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os03g09045.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a001032 , Zm00025a053219
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G291400 dehydrogenase, putative, expressed -
2 Sobic.001G416300 expressed protein -
3 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
4 Sobic.001G321600 dehydration response related protein, putative, expressed -
5 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.008G142600 amino acid permease family protein, putative, expressed -
7 Sobic.002G281800 expressed protein -
8 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
9 Sobic.003G237000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
10 Sobic.005G072200 lipase, putative, expressed -
11 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
12 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
13 Sobic.005G060300 - -
14 Sobic.010G089200 expressed protein -
15 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.003G359900 C2 domain containing protein, expressed -
17 Sobic.008G111300 transporter family protein, putative, expressed -
18 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
19 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.001G145050 - -


Gene co-expression network
sample Sobic001G475701 Sobic001G475701 Sobic003G291400 Sobic003G291400 Sobic001G475701--Sobic003G291400 Sobic001G416300 Sobic001G416300 Sobic001G475701--Sobic001G416300 Sobic003G402200 Sobic003G402200 Sobic001G475701--Sobic003G402200 Sobic001G321600 Sobic001G321600 Sobic001G475701--Sobic001G321600 Sobic005G089000 Sobic005G089000 Sobic001G475701--Sobic005G089000 Sobic008G142600 Sobic008G142600 Sobic001G475701--Sobic008G142600 Sobic002G281800 Sobic002G281800 Sobic001G475701--Sobic002G281800 Sobic001G427700 Sobic001G427700 Sobic001G475701--Sobic001G427700 Sobic003G237000 Sobic003G237000 Sobic001G475701--Sobic003G237000 Sobic010G089200 Sobic010G089200 Sobic003G291400--Sobic010G089200 Sobic003G291400--Sobic001G321600 Sobic003G291400--Sobic005G089000 Sobic002G281000 Sobic002G281000 Sobic003G291400--Sobic002G281000 Sobic006G131800 Sobic006G131800 Sobic003G291400--Sobic006G131800 Sobic002G195700 Sobic002G195700 Sobic003G291400--Sobic002G195700 Sobic003G291400--Sobic002G281800 Sobic001G005500 Sobic001G005500 Sobic003G291400--Sobic001G005500 Sobic005G021600 Sobic005G021600 Sobic003G291400--Sobic005G021600 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G416300--Sobic001G427700 Sobic004G018400 Sobic004G018400 Sobic001G416300--Sobic004G018400 Sobic009G190800 Sobic009G190800 Sobic001G416300--Sobic009G190800 Sobic001G416300--Sobic003G402200 Sobic001G416300--Sobic005G089000 Sobic001G416300--Sobic008G142600 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic003G402200--Sobic009G205600 Sobic004G078600 Sobic004G078600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic001G320700 Sobic001G320700 Sobic003G402200--Sobic001G320700 Sobic001G201800 Sobic001G201800 Sobic003G402200--Sobic001G201800 Sobic003G402200--Sobic001G427700 Sobic003G402200--Sobic005G089000 Sobic008G111300 Sobic008G111300 Sobic003G402200--Sobic008G111300 Sobic001G321600--Sobic001G005500 Sobic001G019300 Sobic001G019300 Sobic001G321600--Sobic001G019300 Sobic001G321600--Sobic002G195700 Sobic001G321600--Sobic010G089200 Sobic008G073400 Sobic008G073400 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic001G321600--Sobic002G281000 Sobic001G321600--Sobic003G237000 Sobic002G366100 Sobic002G366100 Sobic001G321600--Sobic002G366100 Sobic005G089000--Sobic002G195700 Sobic005G089000--Sobic001G321600 Sobic005G089000--Sobic008G073400 Sobic005G089000--Sobic001G019300 Sobic005G089000--Sobic001G005500 Sobic003G135800 Sobic003G135800 Sobic005G089000--Sobic003G135800 Sobic005G089000--Sobic003G291400 Sobic003G106500 Sobic003G106500 Sobic005G089000--Sobic003G106500 Sobic001G452700 Sobic001G452700 Sobic005G089000--Sobic001G452700 Sobic008G142600--Sobic001G427700 Sobic002G271600 Sobic002G271600 Sobic008G142600--Sobic002G271600 Sobic008G142600--Sobic003G402200 Sobic008G142600--Sobic001G321600 Sobic001G022600 Sobic001G022600 Sobic008G142600--Sobic001G022600 Sobic008G142600--Sobic001G416300 Sobic008G142600--Sobic008G111300 Sobic008G142600--Sobic002G366100 Sobic008G142600--Sobic009G190800 Sobic010G080300 Sobic010G080300 Sobic002G281800--Sobic010G080300 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic007G029100 Sobic007G029100 Sobic002G281800--Sobic007G029100 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic004G152100 Sobic004G152100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic001G427700--Sobic008G142600 Sobic001G427700--Sobic003G402200 Sobic001G427700--Sobic004G018400 Sobic001G427700--Sobic001G320700 Sobic001G427700--Sobic001G416300 Sobic003G213900 Sobic003G213900 Sobic001G427700--Sobic003G213900 Sobic001G315800 Sobic001G315800 Sobic001G427700--Sobic001G315800 Sobic004G217700 Sobic004G217700 Sobic001G427700--Sobic004G217700 Sobic010G214200 Sobic010G214200 Sobic001G427700--Sobic010G214200 Sobic003G237000--Sobic001G321600 Sobic003G237000--Sobic002G195700 Sobic003G237000--Sobic001G019300 Sobic003G237000--Sobic001G145050 Sobic002G142066 Sobic002G142066 Sobic003G237000--Sobic002G142066 Sobic003G237000--Sobic001G005500 Sobic003G237000--Sobic008G073400 Sobic003G237000--Sobic003G291400 Sobic003G237000--Sobic001G520100
Octagon: transcription factors


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