Gene annotation
Transcriptome id Sobic.001G400300.1
Synonym Sb01g037890
Functional annotation heat shock protein DnaJ, putative, expressed
UniProt A0A1B6QNQ1
Pfam PF00226
Panther DB PTHR24078
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56300 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os03g18870.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a052612 , Zm00025a002080
Brachypodium KQK22059
Barley HORVU4Hr1G054850.4 , HORVU4Hr1G054850.5 , HORVU4Hr1G054850.6 , HORVU4Hr1G054850.7 , HORVU4Hr1G054850.1 , HORVU4Hr1G054850.2 , HORVU4Hr1G054850.3 , HORVU3Hr1G116050.6 , HORVU3Hr1G116050.7 , HORVU3Hr1G116050.4 , HORVU3Hr1G116050.5 , HORVU3Hr1G116050.2 , HORVU3Hr1G116050.3 , HORVU3Hr1G116050.1 , HORVU3Hr1G116050.8 , HORVU3Hr1G116050.9 , HORVU3Hr1G116050.10 , HORVU3Hr1G116050.11
Wheat TraesCS4B02G187600 , TraesCS4D02G189000 , TraesCS4D02G189000 , TraesCS4B02G187600 , TraesCS4A02G116800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G400300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110100 cysteine synthase, mitochondrial precursor, putative, expressed K01738: cysteine synthase
2 Sobic.001G416300 expressed protein -
3 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
4 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
5 Sobic.007G162300 OsGrx_S12 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
6 Sobic.003G191000 FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
7 Sobic.002G297900 CDGSH iron sulfur domain-containing protein 1, putative, expressed -
8 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
9 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
10 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
12 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
13 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
14 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G370000 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.006G084500 expressed protein -
18 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
19 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
20 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic001G400300 Sobic001G400300 Sobic003G110100 Sobic003G110100 Sobic001G400300--Sobic003G110100 Sobic001G416300 Sobic001G416300 Sobic001G400300--Sobic001G416300 Sobic001G376700 Sobic001G376700 Sobic001G400300--Sobic001G376700 Sobic001G065500 Sobic001G065500 Sobic001G400300--Sobic001G065500 Sobic007G162300 Sobic007G162300 Sobic001G400300--Sobic007G162300 Sobic003G191000 Sobic003G191000 Sobic001G400300--Sobic003G191000 Sobic002G297900 Sobic002G297900 Sobic001G400300--Sobic002G297900 Sobic002G384400 Sobic002G384400 Sobic001G400300--Sobic002G384400 Sobic003G330100 Sobic003G330100 Sobic001G400300--Sobic003G330100 Sobic004G265900 Sobic004G265900 Sobic003G110100--Sobic004G265900 Sobic003G110100--Sobic001G400300 Sobic003G110100--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic003G110100--Sobic006G111600 Sobic003G221700 Sobic003G221700 Sobic003G110100--Sobic003G221700 Sobic003G110100--Sobic003G191000 Sobic002G345200 Sobic002G345200 Sobic003G110100--Sobic002G345200 Sobic003G110100--Sobic007G162300 Sobic004G193600 Sobic004G193600 Sobic003G110100--Sobic004G193600 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G427700 Sobic001G427700 Sobic001G416300--Sobic001G427700 Sobic004G018400 Sobic004G018400 Sobic001G416300--Sobic004G018400 Sobic009G190800 Sobic009G190800 Sobic001G416300--Sobic009G190800 Sobic003G402200 Sobic003G402200 Sobic001G416300--Sobic003G402200 Sobic005G089000 Sobic005G089000 Sobic001G416300--Sobic005G089000 Sobic008G142600 Sobic008G142600 Sobic001G416300--Sobic008G142600 Sobic004G296800 Sobic004G296800 Sobic001G376700--Sobic004G296800 Sobic006G084500 Sobic006G084500 Sobic001G376700--Sobic006G084500 Sobic004G044200 Sobic004G044200 Sobic001G376700--Sobic004G044200 Sobic009G124000 Sobic009G124000 Sobic001G376700--Sobic009G124000 Sobic003G420900 Sobic003G420900 Sobic001G376700--Sobic003G420900 Sobic003G292300 Sobic003G292300 Sobic001G376700--Sobic003G292300 Sobic009G180800 Sobic009G180800 Sobic001G376700--Sobic009G180800 Sobic008G123600 Sobic008G123600 Sobic001G376700--Sobic008G123600 Sobic009G001500 Sobic009G001500 Sobic001G376700--Sobic009G001500 Sobic003G328200 Sobic003G328200 Sobic001G065500--Sobic003G328200 Sobic006G280050 Sobic006G280050 Sobic001G065500--Sobic006G280050 Sobic004G314800 Sobic004G314800 Sobic001G065500--Sobic004G314800 Sobic001G191000 Sobic001G191000 Sobic001G065500--Sobic001G191000 Sobic009G028400 Sobic009G028400 Sobic001G065500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic001G065500--Sobic010G265500 Sobic006G107600 Sobic006G107600 Sobic001G065500--Sobic006G107600 Sobic003G187000 Sobic003G187000 Sobic001G065500--Sobic003G187000 Sobic001G240000 Sobic001G240000 Sobic001G065500--Sobic001G240000 Sobic001G527100 Sobic001G527100 Sobic007G162300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic007G162300--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic007G162300--Sobic004G164100 Sobic002G251400 Sobic002G251400 Sobic007G162300--Sobic002G251400 Sobic007G162300--Sobic003G328200 Sobic002G288300 Sobic002G288300 Sobic007G162300--Sobic002G288300 Sobic007G162300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic007G162300--Sobic010G095200 Sobic001G531200 Sobic001G531200 Sobic007G162300--Sobic001G531200 Sobic007G075700 Sobic007G075700 Sobic003G191000--Sobic007G075700 Sobic001G170900 Sobic001G170900 Sobic003G191000--Sobic001G170900 Sobic005G056201 Sobic005G056201 Sobic003G191000--Sobic005G056201 Sobic003G234101 Sobic003G234101 Sobic003G191000--Sobic003G234101 Sobic007G009600 Sobic007G009600 Sobic003G191000--Sobic007G009600 Sobic009G161100 Sobic009G161100 Sobic003G191000--Sobic009G161100 Sobic003G191000--Sobic008G123600 Sobic003G191000--Sobic003G110100 Sobic005G200600 Sobic005G200600 Sobic003G191000--Sobic005G200600 Sobic008G112300 Sobic008G112300 Sobic002G297900--Sobic008G112300 Sobic004G076000 Sobic004G076000 Sobic002G297900--Sobic004G076000 Sobic003G295800 Sobic003G295800 Sobic002G297900--Sobic003G295800 Sobic010G215500 Sobic010G215500 Sobic002G297900--Sobic010G215500 Sobic002G297900--Sobic008G123600 Sobic002G297900--Sobic003G328200 Sobic007G185100 Sobic007G185100 Sobic002G297900--Sobic007G185100 Sobic001G017000 Sobic001G017000 Sobic002G297900--Sobic001G017000 Sobic004G311100 Sobic004G311100 Sobic002G297900--Sobic004G311100 Sobic004G068700 Sobic004G068700 Sobic002G384400--Sobic004G068700 Sobic002G384400--Sobic001G161300 Sobic009G138900 Sobic009G138900 Sobic002G384400--Sobic009G138900 Sobic002G386400 Sobic002G386400 Sobic002G384400--Sobic002G386400 Sobic002G384400--Sobic002G226100 Sobic002G038300 Sobic002G038300 Sobic002G384400--Sobic002G038300 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G384400--Sobic002G345200 Sobic003G330100--Sobic006G111600 Sobic002G131700 Sobic002G131700 Sobic003G330100--Sobic002G131700 Sobic004G250200 Sobic004G250200 Sobic003G330100--Sobic004G250200 Sobic009G234200 Sobic009G234200 Sobic003G330100--Sobic009G234200 Sobic003G330100--Sobic003G221700 Sobic008G072300 Sobic008G072300 Sobic003G330100--Sobic008G072300 Sobic003G330100--Sobic006G204100 Sobic010G183400 Sobic010G183400 Sobic003G330100--Sobic010G183400 Sobic003G330100--Sobic002G345200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.