Gene annotation
Transcriptome id Sobic.003G191000.1
Synonym THI1, TZ, Sb03g025520, THI4
Functional annotation FAD dependent oxidoreductase domain containing protein, expressed
UniProt C5XNN6
Pfam PF01946
Panther DB PTHR10617 PTHR10617:SF115
NCBI CDD KOG2960; Protein involved in thiamine biosynthesis and DNA damage tolerance
KEGG Orthology K03146; THI4, cysteine-dependent adenosine diphosphate thiazole synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54770 : thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
RAP-DB (Rice) LOC_Os07g34570.1 : FAD dependent oxidoreductase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038371 , Zm00025a028420
Brachypodium KQK15929
Barley HORVU7Hr1G090100.5 , HORVU7Hr1G090100.4 , HORVU7Hr1G090100.1 , HORVU7Hr1G090100.3 , HORVU7Hr1G090100.2
Wheat TraesCS7B02G278200 , TraesCS7A02G376800 , TraesCS7D02G373100 , TraesCS7D02G373100
Populus -


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cDNA sequences
Sobic.003G191000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.001G170900 expressed protein -
3 Sobic.005G056201 - -
4 Sobic.003G234101 - -
5 Sobic.007G009600 expressed protein -
6 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
8 Sobic.003G110100 cysteine synthase, mitochondrial precursor, putative, expressed K01738: cysteine synthase
9 Sobic.005G200600 dirigent, putative, expressed -
10 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
13 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
14 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
15 Sobic.001G435600 - -
16 Sobic.010G240700 PPR repeat containing protein, expressed -
17 Sobic.003G435100 expressed protein -
18 Sobic.009G115050 - -
19 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.002G416950 - -


Gene co-expression network
sample Sobic003G191000 Sobic003G191000 Sobic007G075700 Sobic007G075700 Sobic003G191000--Sobic007G075700 Sobic001G170900 Sobic001G170900 Sobic003G191000--Sobic001G170900 Sobic005G056201 Sobic005G056201 Sobic003G191000--Sobic005G056201 Sobic003G234101 Sobic003G234101 Sobic003G191000--Sobic003G234101 Sobic007G009600 Sobic007G009600 Sobic003G191000--Sobic007G009600 Sobic009G161100 Sobic009G161100 Sobic003G191000--Sobic009G161100 Sobic008G123600 Sobic008G123600 Sobic003G191000--Sobic008G123600 Sobic003G110100 Sobic003G110100 Sobic003G191000--Sobic003G110100 Sobic005G200600 Sobic005G200600 Sobic003G191000--Sobic005G200600 Sobic010G240700 Sobic010G240700 Sobic007G075700--Sobic010G240700 Sobic007G075700--Sobic003G234101 Sobic010G240600 Sobic010G240600 Sobic007G075700--Sobic010G240600 Sobic010G240500 Sobic010G240500 Sobic007G075700--Sobic010G240500 Sobic007G075700--Sobic007G009600 Sobic002G416950 Sobic002G416950 Sobic007G075700--Sobic002G416950 Sobic007G170800 Sobic007G170800 Sobic007G075700--Sobic007G170800 Sobic007G075700--Sobic003G191000 Sobic004G060700 Sobic004G060700 Sobic007G075700--Sobic004G060700 Sobic003G058600 Sobic003G058600 Sobic001G170900--Sobic003G058600 Sobic001G170900--Sobic005G056201 Sobic001G003600 Sobic001G003600 Sobic001G170900--Sobic001G003600 Sobic001G170900--Sobic003G191000 Sobic006G172700 Sobic006G172700 Sobic001G170900--Sobic006G172700 Sobic001G170900--Sobic007G009600 Sobic001G394250 Sobic001G394250 Sobic001G170900--Sobic001G394250 Sobic005G110436 Sobic005G110436 Sobic001G170900--Sobic005G110436 Sobic001G127700 Sobic001G127700 Sobic001G170900--Sobic001G127700 Sobic005G056201--Sobic006G172700 Sobic002G020100 Sobic002G020100 Sobic005G056201--Sobic002G020100 Sobic005G056201--Sobic001G003600 Sobic009G059100 Sobic009G059100 Sobic005G056201--Sobic009G059100 Sobic004G076000 Sobic004G076000 Sobic005G056201--Sobic004G076000 Sobic003G157500 Sobic003G157500 Sobic005G056201--Sobic003G157500 Sobic003G096100 Sobic003G096100 Sobic005G056201--Sobic003G096100 Sobic005G020200 Sobic005G020200 Sobic005G056201--Sobic005G020200 Sobic006G025700 Sobic006G025700 Sobic005G056201--Sobic006G025700 Sobic003G234101--Sobic007G075700 Sobic010G052300 Sobic010G052300 Sobic003G234101--Sobic010G052300 Sobic003G234101--Sobic010G240700 Sobic001G343400 Sobic001G343400 Sobic003G234101--Sobic001G343400 Sobic010G171300 Sobic010G171300 Sobic003G234101--Sobic010G171300 Sobic003G234101--Sobic010G240500 Sobic003G435100 Sobic003G435100 Sobic003G234101--Sobic003G435100 Sobic006G249400 Sobic006G249400 Sobic003G234101--Sobic006G249400 Sobic003G234101--Sobic010G240600 Sobic007G009600--Sobic004G060700 Sobic007G009600--Sobic002G416950 Sobic007G009600--Sobic007G170800 Sobic001G379300 Sobic001G379300 Sobic007G009600--Sobic001G379300 Sobic006G238100 Sobic006G238100 Sobic007G009600--Sobic006G238100 Sobic008G163200 Sobic008G163200 Sobic007G009600--Sobic008G163200 Sobic002G415300 Sobic002G415300 Sobic007G009600--Sobic002G415300 Sobic001G435600 Sobic001G435600 Sobic007G009600--Sobic001G435600 Sobic002G415400 Sobic002G415400 Sobic007G009600--Sobic002G415400 Sobic001G472000 Sobic001G472000 Sobic009G161100--Sobic001G472000 Sobic009G161100--Sobic005G200600 Sobic002G141100 Sobic002G141100 Sobic009G161100--Sobic002G141100 Sobic005G218600 Sobic005G218600 Sobic009G161100--Sobic005G218600 Sobic004G249400 Sobic004G249400 Sobic009G161100--Sobic004G249400 Sobic001G541300 Sobic001G541300 Sobic009G161100--Sobic001G541300 Sobic009G161100--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic009G161100--Sobic002G209800 Sobic001G315200 Sobic001G315200 Sobic009G161100--Sobic001G315200 Sobic008G123600--Sobic004G076000 Sobic003G383600 Sobic003G383600 Sobic008G123600--Sobic003G383600 Sobic008G123600--Sobic001G003600 Sobic001G323801 Sobic001G323801 Sobic008G123600--Sobic001G323801 Sobic001G069500 Sobic001G069500 Sobic008G123600--Sobic001G069500 Sobic008G123600--Sobic001G435600 Sobic009G115050 Sobic009G115050 Sobic008G123600--Sobic009G115050 Sobic003G295800 Sobic003G295800 Sobic008G123600--Sobic003G295800 Sobic008G123600--Sobic006G172700 Sobic004G265900 Sobic004G265900 Sobic003G110100--Sobic004G265900 Sobic001G400300 Sobic001G400300 Sobic003G110100--Sobic001G400300 Sobic003G330100 Sobic003G330100 Sobic003G110100--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic003G110100--Sobic006G111600 Sobic003G221700 Sobic003G221700 Sobic003G110100--Sobic003G221700 Sobic003G110100--Sobic003G191000 Sobic002G345200 Sobic002G345200 Sobic003G110100--Sobic002G345200 Sobic007G162300 Sobic007G162300 Sobic003G110100--Sobic007G162300 Sobic004G193600 Sobic004G193600 Sobic003G110100--Sobic004G193600 Sobic005G200600--Sobic006G238100 Sobic005G200600--Sobic002G141100 Sobic005G200600--Sobic004G060700 Sobic005G200600--Sobic002G416950 Sobic005G200600--Sobic009G059100 Sobic005G200600--Sobic004G249400 Sobic005G200600--Sobic007G009600 Sobic005G200600--Sobic001G541300 Sobic005G200600--Sobic001G379300
Octagon: transcription factors


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