Gene annotation
Transcriptome id Sobic.003G234101.1
Synonym -
Functional annotation -
UniProt A0A1W0VYN1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
3 Sobic.010G240700 PPR repeat containing protein, expressed -
4 Sobic.001G343400 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
5 Sobic.010G171300 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
6 Sobic.010G240500 cadmium/zinc-transporting ATPase, putative, expressed -
7 Sobic.003G435100 expressed protein -
8 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
9 Sobic.010G240600 - -
10 Sobic.003G191000 FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
11 Sobic.006G161900 expressed protein K08331: autophagy-related protein 13
12 Sobic.007G009600 expressed protein -
13 Sobic.001G170900 expressed protein -
14 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
15 Sobic.006G177800 Prolyl oligopeptidase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsPOP9 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
16 Sobic.004G052401 - -
17 Sobic.010G120200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
18 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
19 Sobic.007G127600 transferase family protein, putative, expressed -
20 Sobic.002G416950 - -


Gene co-expression network
sample Sobic003G234101 Sobic003G234101 Sobic007G075700 Sobic007G075700 Sobic003G234101--Sobic007G075700 Sobic010G052300 Sobic010G052300 Sobic003G234101--Sobic010G052300 Sobic010G240700 Sobic010G240700 Sobic003G234101--Sobic010G240700 Sobic001G343400 Sobic001G343400 Sobic003G234101--Sobic001G343400 Sobic010G171300 Sobic010G171300 Sobic003G234101--Sobic010G171300 Sobic010G240500 Sobic010G240500 Sobic003G234101--Sobic010G240500 Sobic003G435100 Sobic003G435100 Sobic003G234101--Sobic003G435100 Sobic006G249400 Sobic006G249400 Sobic003G234101--Sobic006G249400 Sobic010G240600 Sobic010G240600 Sobic003G234101--Sobic010G240600 Sobic007G075700--Sobic010G240700 Sobic007G075700--Sobic003G234101 Sobic007G075700--Sobic010G240600 Sobic007G075700--Sobic010G240500 Sobic007G009600 Sobic007G009600 Sobic007G075700--Sobic007G009600 Sobic002G416950 Sobic002G416950 Sobic007G075700--Sobic002G416950 Sobic007G170800 Sobic007G170800 Sobic007G075700--Sobic007G170800 Sobic003G191000 Sobic003G191000 Sobic007G075700--Sobic003G191000 Sobic004G060700 Sobic004G060700 Sobic007G075700--Sobic004G060700 Sobic010G052300--Sobic003G234101 Sobic010G052300--Sobic007G075700 Sobic010G052300--Sobic010G171300 Sobic004G052401 Sobic004G052401 Sobic010G052300--Sobic004G052401 Sobic006G161900 Sobic006G161900 Sobic010G052300--Sobic006G161900 Sobic009G073100 Sobic009G073100 Sobic010G052300--Sobic009G073100 Sobic010G052300--Sobic010G240500 Sobic009G200400 Sobic009G200400 Sobic010G052300--Sobic009G200400 Sobic010G052300--Sobic001G343400 Sobic010G240700--Sobic010G240600 Sobic010G240700--Sobic007G075700 Sobic010G240700--Sobic010G240500 Sobic010G240700--Sobic007G009600 Sobic007G069500 Sobic007G069500 Sobic010G240700--Sobic007G069500 Sobic001G379300 Sobic001G379300 Sobic010G240700--Sobic001G379300 Sobic010G240700--Sobic002G416950 Sobic010G240700--Sobic004G060700 Sobic010G240700--Sobic007G170800 Sobic003G371400 Sobic003G371400 Sobic001G343400--Sobic003G371400 Sobic001G343400--Sobic003G234101 Sobic004G290300 Sobic004G290300 Sobic001G343400--Sobic004G290300 Sobic001G140300 Sobic001G140300 Sobic001G343400--Sobic001G140300 Sobic005G112000 Sobic005G112000 Sobic001G343400--Sobic005G112000 Sobic005G145100 Sobic005G145100 Sobic001G343400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G343400--Sobic001G388000 Sobic002G041150 Sobic002G041150 Sobic001G343400--Sobic002G041150 Sobic008G055800 Sobic008G055800 Sobic001G343400--Sobic008G055800 Sobic010G171300--Sobic010G052300 Sobic010G171300--Sobic003G234101 Sobic010G171300--Sobic009G200400 Sobic010G171300--Sobic004G052401 Sobic006G256200 Sobic006G256200 Sobic010G171300--Sobic006G256200 Sobic010G171300--Sobic007G075700 Sobic010G171300--Sobic006G161900 Sobic010G171300--Sobic001G343400 Sobic005G004100 Sobic005G004100 Sobic010G171300--Sobic005G004100 Sobic010G240500--Sobic007G075700 Sobic010G240500--Sobic010G240700 Sobic010G240500--Sobic010G240600 Sobic003G292300 Sobic003G292300 Sobic010G240500--Sobic003G292300 Sobic010G240500--Sobic007G170800 Sobic010G240500--Sobic003G234101 Sobic002G297900 Sobic002G297900 Sobic010G240500--Sobic002G297900 Sobic010G240500--Sobic004G060700 Sobic001G366500 Sobic001G366500 Sobic010G240500--Sobic001G366500 Sobic003G435100--Sobic007G075700 Sobic003G435100--Sobic003G234101 Sobic003G435100--Sobic003G191000 Sobic003G435100--Sobic006G161900 Sobic003G435100--Sobic001G343400 Sobic003G435100--Sobic010G052300 Sobic003G435100--Sobic006G249400 Sobic003G435100--Sobic010G171300 Sobic001G170900 Sobic001G170900 Sobic003G435100--Sobic001G170900 Sobic004G044200 Sobic004G044200 Sobic006G249400--Sobic004G044200 Sobic006G249400--Sobic003G234101 Sobic006G249400--Sobic007G075700 Sobic005G218600 Sobic005G218600 Sobic006G249400--Sobic005G218600 Sobic004G309300 Sobic004G309300 Sobic006G249400--Sobic004G309300 Sobic006G249400--Sobic006G256200 Sobic005G218700 Sobic005G218700 Sobic006G249400--Sobic005G218700 Sobic006G033800 Sobic006G033800 Sobic006G249400--Sobic006G033800 Sobic001G012600 Sobic001G012600 Sobic006G249400--Sobic001G012600 Sobic010G240600--Sobic007G009600 Sobic010G240600--Sobic010G240700 Sobic010G240600--Sobic007G170800 Sobic010G240600--Sobic002G416950 Sobic010G240600--Sobic004G060700 Sobic010G240600--Sobic001G379300 Sobic010G240600--Sobic007G075700 Sobic001G541300 Sobic001G541300 Sobic010G240600--Sobic001G541300 Sobic010G240600--Sobic007G069500
Octagon: transcription factors


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