Gene annotation
Transcriptome id Sobic.006G177800.1
Synonym Sb06g025250
Functional annotation Prolyl oligopeptidase family protein( (PubMedID : 26759170,(PubMedID : 24597475)
OsPOP9 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt C5YDY2
Pfam PF00326 PF02897
Panther DB PTHR11757 PTHR11757:SF8
NCBI CDD -
KEGG Orthology K01322; prolyl oligopeptidase
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G76140 : Prolyl oligopeptidase family protein
RAP-DB (Rice) LOC_Os04g47360.1 : OsPOP9 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a010220
Brachypodium PNT61652 , PNT61653 , PNT61651
Barley -
Wheat TraesCS2B02G424500 , TraesCS2B02G424500 , TraesCS2D02G403800 , TraesCS2A02G406900
Populus -


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cDNA sequences
Sobic.006G177800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G125500 expressed protein -
2 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
3 Sobic.010G240500 cadmium/zinc-transporting ATPase, putative, expressed -
4 Sobic.002G083200 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
5 Sobic.008G089500 Fe-S metabolism associated domain containing protein, expressed K03517: quinolinate synthase
6 Sobic.008G119300 - -
7 Sobic.009G073100 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
8 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
9 Sobic.006G155500 expressed protein -
10 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
11 Sobic.008G037800 ACT domain containing protein, expressed -
12 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
13 Sobic.009G079950 - -
14 Sobic.003G234101 - -
15 Sobic.001G118400 expressed protein -
16 Sobic.007G123800 DUF581 domain containing protein, expressed -
17 Sobic.002G331800 PPR repeat containing protein, expressed -
18 Sobic.010G056300 PPR repeat domain containing protein, putative, expressed -
19 Sobic.002G142132 - -
20 Sobic.004G312800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14


Gene co-expression network
sample Sobic006G177800 Sobic006G177800 Sobic007G125500 Sobic007G125500 Sobic006G177800--Sobic007G125500 Sobic003G306700 Sobic003G306700 Sobic006G177800--Sobic003G306700 Sobic010G240500 Sobic010G240500 Sobic006G177800--Sobic010G240500 Sobic002G083200 Sobic002G083200 Sobic006G177800--Sobic002G083200 Sobic008G089500 Sobic008G089500 Sobic006G177800--Sobic008G089500 Sobic008G119300 Sobic008G119300 Sobic006G177800--Sobic008G119300 Sobic009G073100 Sobic009G073100 Sobic006G177800--Sobic009G073100 Sobic006G111600 Sobic006G111600 Sobic006G177800--Sobic006G111600 Sobic006G155500 Sobic006G155500 Sobic006G177800--Sobic006G155500 Sobic008G037800 Sobic008G037800 Sobic007G125500--Sobic008G037800 Sobic004G252500 Sobic004G252500 Sobic007G125500--Sobic004G252500 Sobic007G125500--Sobic006G177800 Sobic010G062500 Sobic010G062500 Sobic007G125500--Sobic010G062500 Sobic004G165900 Sobic004G165900 Sobic007G125500--Sobic004G165900 Sobic002G072400 Sobic002G072400 Sobic007G125500--Sobic002G072400 Sobic003G070900 Sobic003G070900 Sobic007G125500--Sobic003G070900 Sobic005G199400 Sobic005G199400 Sobic007G125500--Sobic005G199400 Sobic006G177900 Sobic006G177900 Sobic007G125500--Sobic006G177900 Sobic004G300000 Sobic004G300000 Sobic003G306700--Sobic004G300000 Sobic006G201100 Sobic006G201100 Sobic003G306700--Sobic006G201100 Sobic010G035500 Sobic010G035500 Sobic003G306700--Sobic010G035500 Sobic006G214700 Sobic006G214700 Sobic003G306700--Sobic006G214700 Sobic009G079950 Sobic009G079950 Sobic003G306700--Sobic009G079950 Sobic002G025700 Sobic002G025700 Sobic003G306700--Sobic002G025700 Sobic002G331800 Sobic002G331800 Sobic003G306700--Sobic002G331800 Sobic006G110900 Sobic006G110900 Sobic003G306700--Sobic006G110900 Sobic004G164200 Sobic004G164200 Sobic003G306700--Sobic004G164200 Sobic007G075700 Sobic007G075700 Sobic010G240500--Sobic007G075700 Sobic010G240700 Sobic010G240700 Sobic010G240500--Sobic010G240700 Sobic010G240600 Sobic010G240600 Sobic010G240500--Sobic010G240600 Sobic003G292300 Sobic003G292300 Sobic010G240500--Sobic003G292300 Sobic007G170800 Sobic007G170800 Sobic010G240500--Sobic007G170800 Sobic003G234101 Sobic003G234101 Sobic010G240500--Sobic003G234101 Sobic002G297900 Sobic002G297900 Sobic010G240500--Sobic002G297900 Sobic004G060700 Sobic004G060700 Sobic010G240500--Sobic004G060700 Sobic001G366500 Sobic001G366500 Sobic010G240500--Sobic001G366500 Sobic010G265500 Sobic010G265500 Sobic002G083200--Sobic010G265500 Sobic002G083200--Sobic009G073100 Sobic003G125400 Sobic003G125400 Sobic002G083200--Sobic003G125400 Sobic010G208700 Sobic010G208700 Sobic002G083200--Sobic010G208700 Sobic010G080300 Sobic010G080300 Sobic002G083200--Sobic010G080300 Sobic010G199000 Sobic010G199000 Sobic002G083200--Sobic010G199000 Sobic004G193600 Sobic004G193600 Sobic002G083200--Sobic004G193600 Sobic002G083200--Sobic006G177800 Sobic002G424100 Sobic002G424100 Sobic002G083200--Sobic002G424100 Sobic005G002900 Sobic005G002900 Sobic008G089500--Sobic005G002900 Sobic001G495200 Sobic001G495200 Sobic008G089500--Sobic001G495200 Sobic001G283700 Sobic001G283700 Sobic008G089500--Sobic001G283700 Sobic004G333400 Sobic004G333400 Sobic008G089500--Sobic004G333400 Sobic004G179200 Sobic004G179200 Sobic008G089500--Sobic004G179200 Sobic003G334100 Sobic003G334100 Sobic008G089500--Sobic003G334100 Sobic001G025400 Sobic001G025400 Sobic008G089500--Sobic001G025400 Sobic003G286300 Sobic003G286300 Sobic008G089500--Sobic003G286300 Sobic002G181000 Sobic002G181000 Sobic008G089500--Sobic002G181000 Sobic002G267900 Sobic002G267900 Sobic008G119300--Sobic002G267900 Sobic001G175700 Sobic001G175700 Sobic008G119300--Sobic001G175700 Sobic009G131800 Sobic009G131800 Sobic008G119300--Sobic009G131800 Sobic002G271700 Sobic002G271700 Sobic008G119300--Sobic002G271700 Sobic008G172700 Sobic008G172700 Sobic008G119300--Sobic008G172700 Sobic006G050400 Sobic006G050400 Sobic008G119300--Sobic006G050400 Sobic008G119250 Sobic008G119250 Sobic008G119300--Sobic008G119250 Sobic004G012900 Sobic004G012900 Sobic008G119300--Sobic004G012900 Sobic002G272100 Sobic002G272100 Sobic008G119300--Sobic002G272100 Sobic007G208300 Sobic007G208300 Sobic009G073100--Sobic007G208300 Sobic004G055500 Sobic004G055500 Sobic009G073100--Sobic004G055500 Sobic009G073100--Sobic002G083200 Sobic005G084800 Sobic005G084800 Sobic009G073100--Sobic005G084800 Sobic010G052300 Sobic010G052300 Sobic009G073100--Sobic010G052300 Sobic001G531400 Sobic001G531400 Sobic009G073100--Sobic001G531400 Sobic004G301200 Sobic004G301200 Sobic009G073100--Sobic004G301200 Sobic001G295300 Sobic001G295300 Sobic009G073100--Sobic001G295300 Sobic002G128900 Sobic002G128900 Sobic009G073100--Sobic002G128900 Sobic003G330100 Sobic003G330100 Sobic006G111600--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic006G111600--Sobic003G221700 Sobic002G131700 Sobic002G131700 Sobic006G111600--Sobic002G131700 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic006G111600--Sobic006G197700 Sobic009G028400 Sobic009G028400 Sobic006G111600--Sobic009G028400 Sobic001G118400 Sobic001G118400 Sobic006G155500--Sobic001G118400 Sobic006G155500--Sobic006G050400 Sobic003G328100 Sobic003G328100 Sobic006G155500--Sobic003G328100 Sobic003G253300 Sobic003G253300 Sobic006G155500--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G155500--Sobic001G286600 Sobic006G155500--Sobic006G110900 Sobic002G061900 Sobic002G061900 Sobic006G155500--Sobic002G061900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500
Octagon: transcription factors


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