Gene annotation
Transcriptome id Sobic.004G052401.2,Sobic.004G052401.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLH2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
2 Sobic.010G171300 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
3 Sobic.009G200400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
4 Sobic.005G093500 expressed protein -
5 Sobic.002G041150 - -
6 Sobic.003G234101 - -
7 Sobic.001G343400 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
8 Sobic.003G435100 expressed protein -
9 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
10 Sobic.003G191000 FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
11 Sobic.002G083200 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
12 Sobic.001G358700 heavy metal-associated domain containing protein, expressed -
13 Sobic.004G193600 - -
14 Sobic.003G110100 cysteine synthase, mitochondrial precursor, putative, expressed K01738: cysteine synthase
15 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
16 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
17 Sobic.001G140300 glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.006G177800 Prolyl oligopeptidase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsPOP9 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
19 Sobic.005G071800 - -
20 Sobic.006G161900 expressed protein K08331: autophagy-related protein 13


Gene co-expression network
sample Sobic004G052401 Sobic004G052401 Sobic010G052300 Sobic010G052300 Sobic004G052401--Sobic010G052300 Sobic010G171300 Sobic010G171300 Sobic004G052401--Sobic010G171300 Sobic009G200400 Sobic009G200400 Sobic004G052401--Sobic009G200400 Sobic005G093500 Sobic005G093500 Sobic004G052401--Sobic005G093500 Sobic002G041150 Sobic002G041150 Sobic004G052401--Sobic002G041150 Sobic003G234101 Sobic003G234101 Sobic004G052401--Sobic003G234101 Sobic001G343400 Sobic001G343400 Sobic004G052401--Sobic001G343400 Sobic003G435100 Sobic003G435100 Sobic004G052401--Sobic003G435100 Sobic006G256200 Sobic006G256200 Sobic004G052401--Sobic006G256200 Sobic010G052300--Sobic003G234101 Sobic007G075700 Sobic007G075700 Sobic010G052300--Sobic007G075700 Sobic010G052300--Sobic010G171300 Sobic010G052300--Sobic004G052401 Sobic006G161900 Sobic006G161900 Sobic010G052300--Sobic006G161900 Sobic009G073100 Sobic009G073100 Sobic010G052300--Sobic009G073100 Sobic010G240500 Sobic010G240500 Sobic010G052300--Sobic010G240500 Sobic010G052300--Sobic009G200400 Sobic010G052300--Sobic001G343400 Sobic010G171300--Sobic010G052300 Sobic010G171300--Sobic003G234101 Sobic010G171300--Sobic009G200400 Sobic010G171300--Sobic004G052401 Sobic010G171300--Sobic006G256200 Sobic010G171300--Sobic007G075700 Sobic010G171300--Sobic006G161900 Sobic010G171300--Sobic001G343400 Sobic005G004100 Sobic005G004100 Sobic010G171300--Sobic005G004100 Sobic009G200400--Sobic010G171300 Sobic009G200400--Sobic010G052300 Sobic009G200400--Sobic004G052401 Sobic009G200400--Sobic001G343400 Sobic009G200400--Sobic003G234101 Sobic003G371400 Sobic003G371400 Sobic009G200400--Sobic003G371400 Sobic009G200400--Sobic003G435100 Sobic001G358700 Sobic001G358700 Sobic009G200400--Sobic001G358700 Sobic009G200400--Sobic007G075700 Sobic005G093500--Sobic002G041150 Sobic005G071800 Sobic005G071800 Sobic005G093500--Sobic005G071800 Sobic005G093500--Sobic003G371400 Sobic004G085500 Sobic004G085500 Sobic005G093500--Sobic004G085500 Sobic005G012800 Sobic005G012800 Sobic005G093500--Sobic005G012800 Sobic007G064900 Sobic007G064900 Sobic005G093500--Sobic007G064900 Sobic005G093500--Sobic006G256200 Sobic005G093500--Sobic004G052401 Sobic002G083600 Sobic002G083600 Sobic005G093500--Sobic002G083600 Sobic002G041150--Sobic005G093500 Sobic002G041150--Sobic001G343400 Sobic001G140300 Sobic001G140300 Sobic002G041150--Sobic001G140300 Sobic002G041150--Sobic001G358700 Sobic002G041150--Sobic004G052401 Sobic002G041150--Sobic003G371400 Sobic003G239100 Sobic003G239100 Sobic002G041150--Sobic003G239100 Sobic002G041150--Sobic003G234101 Sobic003G082700 Sobic003G082700 Sobic002G041150--Sobic003G082700 Sobic003G234101--Sobic007G075700 Sobic003G234101--Sobic010G052300 Sobic010G240700 Sobic010G240700 Sobic003G234101--Sobic010G240700 Sobic003G234101--Sobic001G343400 Sobic003G234101--Sobic010G171300 Sobic003G234101--Sobic010G240500 Sobic003G234101--Sobic003G435100 Sobic006G249400 Sobic006G249400 Sobic003G234101--Sobic006G249400 Sobic010G240600 Sobic010G240600 Sobic003G234101--Sobic010G240600 Sobic001G343400--Sobic003G371400 Sobic001G343400--Sobic003G234101 Sobic004G290300 Sobic004G290300 Sobic001G343400--Sobic004G290300 Sobic001G343400--Sobic001G140300 Sobic005G112000 Sobic005G112000 Sobic001G343400--Sobic005G112000 Sobic005G145100 Sobic005G145100 Sobic001G343400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G343400--Sobic001G388000 Sobic001G343400--Sobic002G041150 Sobic008G055800 Sobic008G055800 Sobic001G343400--Sobic008G055800 Sobic003G435100--Sobic007G075700 Sobic003G435100--Sobic003G234101 Sobic003G191000 Sobic003G191000 Sobic003G435100--Sobic003G191000 Sobic003G435100--Sobic006G161900 Sobic003G435100--Sobic001G343400 Sobic003G435100--Sobic010G052300 Sobic003G435100--Sobic006G249400 Sobic003G435100--Sobic010G171300 Sobic001G170900 Sobic001G170900 Sobic003G435100--Sobic001G170900 Sobic008G072600 Sobic008G072600 Sobic006G256200--Sobic008G072600 Sobic009G221900 Sobic009G221900 Sobic006G256200--Sobic009G221900 Sobic008G091557 Sobic008G091557 Sobic006G256200--Sobic008G091557 Sobic009G017500 Sobic009G017500 Sobic006G256200--Sobic009G017500 Sobic006G256200--Sobic006G249400 Sobic006G256200--Sobic002G083600 Sobic001G208600 Sobic001G208600 Sobic006G256200--Sobic001G208600 Sobic006G256200--Sobic005G071800 Sobic005G115600 Sobic005G115600 Sobic006G256200--Sobic005G115600
Octagon: transcription factors


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