Gene annotation
Transcriptome id Sobic.004G193600.1
Synonym
Functional annotation -
UniProt A0A194YQK4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110100 cysteine synthase, mitochondrial precursor, putative, expressed K01738: cysteine synthase
2 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
3 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
4 Sobic.006G161900 expressed protein K08331: autophagy-related protein 13
5 Sobic.002G083200 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
6 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
7 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
8 Sobic.009G073100 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
9 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
10 Sobic.002G317350 - -
11 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
12 Sobic.002G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
13 Sobic.008G057100 eukaryotic aspartyl protease domain containing protein, expressed -
14 Sobic.007G117500 stromal cell-derived factor 2-like protein precursor, putative, expressed -
15 Sobic.003G435100 expressed protein -
16 Sobic.003G025800 - -
17 Sobic.002G209400 transcription initiation factor TFIID subunit 10, putative, expressed K03134: transcription initiation factor TFIID subunit 10
18 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
19 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
20 Sobic.003G298400 expressed protein -


Gene co-expression network
sample Sobic004G193600 Sobic004G193600 Sobic003G110100 Sobic003G110100 Sobic004G193600--Sobic003G110100 Sobic009G124000 Sobic009G124000 Sobic004G193600--Sobic009G124000 Sobic004G301200 Sobic004G301200 Sobic004G193600--Sobic004G301200 Sobic006G161900 Sobic006G161900 Sobic004G193600--Sobic006G161900 Sobic002G083200 Sobic002G083200 Sobic004G193600--Sobic002G083200 Sobic001G067300 Sobic001G067300 Sobic004G193600--Sobic001G067300 Sobic010G052300 Sobic010G052300 Sobic004G193600--Sobic010G052300 Sobic009G073100 Sobic009G073100 Sobic004G193600--Sobic009G073100 Sobic004G144400 Sobic004G144400 Sobic004G193600--Sobic004G144400 Sobic004G265900 Sobic004G265900 Sobic003G110100--Sobic004G265900 Sobic001G400300 Sobic001G400300 Sobic003G110100--Sobic001G400300 Sobic003G330100 Sobic003G330100 Sobic003G110100--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic003G110100--Sobic006G111600 Sobic003G221700 Sobic003G221700 Sobic003G110100--Sobic003G221700 Sobic003G191000 Sobic003G191000 Sobic003G110100--Sobic003G191000 Sobic002G345200 Sobic002G345200 Sobic003G110100--Sobic002G345200 Sobic007G162300 Sobic007G162300 Sobic003G110100--Sobic007G162300 Sobic003G110100--Sobic004G193600 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic004G301200--Sobic007G208300 Sobic006G091300 Sobic006G091300 Sobic004G301200--Sobic006G091300 Sobic004G055500 Sobic004G055500 Sobic004G301200--Sobic004G055500 Sobic004G301200--Sobic004G144400 Sobic003G085000 Sobic003G085000 Sobic004G301200--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic004G301200--Sobic001G424300 Sobic002G424100 Sobic002G424100 Sobic004G301200--Sobic002G424100 Sobic003G162900 Sobic003G162900 Sobic004G301200--Sobic003G162900 Sobic003G267500 Sobic003G267500 Sobic004G301200--Sobic003G267500 Sobic007G075700 Sobic007G075700 Sobic006G161900--Sobic007G075700 Sobic006G161900--Sobic010G052300 Sobic006G161900--Sobic001G376700 Sobic003G234101 Sobic003G234101 Sobic006G161900--Sobic003G234101 Sobic003G435100 Sobic003G435100 Sobic006G161900--Sobic003G435100 Sobic006G161900--Sobic004G193600 Sobic006G249400 Sobic006G249400 Sobic006G161900--Sobic006G249400 Sobic004G296800 Sobic004G296800 Sobic006G161900--Sobic004G296800 Sobic010G171300 Sobic010G171300 Sobic006G161900--Sobic010G171300 Sobic010G265500 Sobic010G265500 Sobic002G083200--Sobic010G265500 Sobic002G083200--Sobic009G073100 Sobic003G125400 Sobic003G125400 Sobic002G083200--Sobic003G125400 Sobic010G208700 Sobic010G208700 Sobic002G083200--Sobic010G208700 Sobic010G080300 Sobic010G080300 Sobic002G083200--Sobic010G080300 Sobic010G199000 Sobic010G199000 Sobic002G083200--Sobic010G199000 Sobic002G083200--Sobic004G193600 Sobic006G177800 Sobic006G177800 Sobic002G083200--Sobic006G177800 Sobic002G083200--Sobic002G424100 Sobic004G314500 Sobic004G314500 Sobic001G067300--Sobic004G314500 Sobic001G096300 Sobic001G096300 Sobic001G067300--Sobic001G096300 Sobic001G067300--Sobic009G124000 Sobic001G067300--Sobic004G265900 Sobic001G380500 Sobic001G380500 Sobic001G067300--Sobic001G380500 Sobic006G238700 Sobic006G238700 Sobic001G067300--Sobic006G238700 Sobic001G067300--Sobic001G486700 Sobic006G244700 Sobic006G244700 Sobic001G067300--Sobic006G244700 Sobic002G116900 Sobic002G116900 Sobic001G067300--Sobic002G116900 Sobic010G052300--Sobic003G234101 Sobic010G052300--Sobic007G075700 Sobic010G052300--Sobic010G171300 Sobic004G052401 Sobic004G052401 Sobic010G052300--Sobic004G052401 Sobic010G052300--Sobic006G161900 Sobic010G052300--Sobic009G073100 Sobic010G240500 Sobic010G240500 Sobic010G052300--Sobic010G240500 Sobic009G200400 Sobic009G200400 Sobic010G052300--Sobic009G200400 Sobic001G343400 Sobic001G343400 Sobic010G052300--Sobic001G343400 Sobic009G073100--Sobic007G208300 Sobic009G073100--Sobic004G055500 Sobic009G073100--Sobic002G083200 Sobic005G084800 Sobic005G084800 Sobic009G073100--Sobic005G084800 Sobic009G073100--Sobic010G052300 Sobic001G531400 Sobic001G531400 Sobic009G073100--Sobic001G531400 Sobic009G073100--Sobic004G301200 Sobic001G295300 Sobic001G295300 Sobic009G073100--Sobic001G295300 Sobic002G128900 Sobic002G128900 Sobic009G073100--Sobic002G128900 Sobic004G019500 Sobic004G019500 Sobic004G144400--Sobic004G019500 Sobic008G067100 Sobic008G067100 Sobic004G144400--Sobic008G067100 Sobic008G090900 Sobic008G090900 Sobic004G144400--Sobic008G090900 Sobic004G003900 Sobic004G003900 Sobic004G144400--Sobic004G003900 Sobic002G181132 Sobic002G181132 Sobic004G144400--Sobic002G181132 Sobic004G144400--Sobic004G301200 Sobic009G092900 Sobic009G092900 Sobic004G144400--Sobic009G092900 Sobic002G218500 Sobic002G218500 Sobic004G144400--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic004G144400--Sobic009G129100
Octagon: transcription factors


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