Gene annotation
Transcriptome id Sobic.003G110100.1,Sobic.003G110100.2
Synonym ACS1, CPACS1, Sb03g009260, OASB, ATCS-B
Functional annotation cysteine synthase, mitochondrial precursor, putative, expressed
UniProt A0A1B6Q2M4 , C5XFP1
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF110
NCBI CDD KOG1252; Cystathionine beta-synthase and related enzymes
KEGG Orthology K01738; cysteine synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43750 : O-acetylserine (thiol) lyase B
RAP-DB (Rice) LOC_Os01g74650.3 : cysteine synthase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a035376 , Zm00025a023895
Brachypodium KQK02802
Barley -
Wheat TraesCS3D02G087300 , TraesCS3A02G087100 , TraesCS3B02G102500
Populus PNT08097


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cDNA sequences
Sobic.003G110100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit
2 Sobic.001G400300 heat shock protein DnaJ, putative, expressed -
3 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
4 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
5 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
6 Sobic.003G191000 FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
7 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.007G162300 OsGrx_S12 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.004G193600 - -
10 Sobic.008G089500 Fe-S metabolism associated domain containing protein, expressed K03517: quinolinate synthase
11 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
12 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
13 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
14 Sobic.009G028400 expressed protein -
15 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
16 Sobic.002G251400 expressed protein -
17 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
18 Sobic.010G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
19 Sobic.003G286300 GTPase of unknown function domain containing protein, putative, expressed K03978: GTP-binding protein
20 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G110100 Sobic003G110100 Sobic004G265900 Sobic004G265900 Sobic003G110100--Sobic004G265900 Sobic001G400300 Sobic001G400300 Sobic003G110100--Sobic001G400300 Sobic003G330100 Sobic003G330100 Sobic003G110100--Sobic003G330100 Sobic006G111600 Sobic006G111600 Sobic003G110100--Sobic006G111600 Sobic003G221700 Sobic003G221700 Sobic003G110100--Sobic003G221700 Sobic003G191000 Sobic003G191000 Sobic003G110100--Sobic003G191000 Sobic002G345200 Sobic002G345200 Sobic003G110100--Sobic002G345200 Sobic007G162300 Sobic007G162300 Sobic003G110100--Sobic007G162300 Sobic004G193600 Sobic004G193600 Sobic003G110100--Sobic004G193600 Sobic009G094700 Sobic009G094700 Sobic004G265900--Sobic009G094700 Sobic004G144000 Sobic004G144000 Sobic004G265900--Sobic004G144000 Sobic003G310100 Sobic003G310100 Sobic004G265900--Sobic003G310100 Sobic008G089500 Sobic008G089500 Sobic004G265900--Sobic008G089500 Sobic003G444500 Sobic003G444500 Sobic004G265900--Sobic003G444500 Sobic004G265900--Sobic003G330100 Sobic005G028900 Sobic005G028900 Sobic004G265900--Sobic005G028900 Sobic010G183400 Sobic010G183400 Sobic004G265900--Sobic010G183400 Sobic008G193300 Sobic008G193300 Sobic004G265900--Sobic008G193300 Sobic001G400300--Sobic003G110100 Sobic001G416300 Sobic001G416300 Sobic001G400300--Sobic001G416300 Sobic001G376700 Sobic001G376700 Sobic001G400300--Sobic001G376700 Sobic001G065500 Sobic001G065500 Sobic001G400300--Sobic001G065500 Sobic001G400300--Sobic007G162300 Sobic001G400300--Sobic003G191000 Sobic002G297900 Sobic002G297900 Sobic001G400300--Sobic002G297900 Sobic002G384400 Sobic002G384400 Sobic001G400300--Sobic002G384400 Sobic001G400300--Sobic003G330100 Sobic003G330100--Sobic006G111600 Sobic002G131700 Sobic002G131700 Sobic003G330100--Sobic002G131700 Sobic004G250200 Sobic004G250200 Sobic003G330100--Sobic004G250200 Sobic009G234200 Sobic009G234200 Sobic003G330100--Sobic009G234200 Sobic003G330100--Sobic003G221700 Sobic008G072300 Sobic008G072300 Sobic003G330100--Sobic008G072300 Sobic006G204100 Sobic006G204100 Sobic003G330100--Sobic006G204100 Sobic003G330100--Sobic010G183400 Sobic003G330100--Sobic002G345200 Sobic006G111600--Sobic003G330100 Sobic006G111600--Sobic003G221700 Sobic006G111600--Sobic002G131700 Sobic004G179200 Sobic004G179200 Sobic006G111600--Sobic004G179200 Sobic006G111600--Sobic009G234200 Sobic006G111600--Sobic004G250200 Sobic006G111600--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic006G111600--Sobic006G197700 Sobic009G028400 Sobic009G028400 Sobic006G111600--Sobic009G028400 Sobic001G333000 Sobic001G333000 Sobic003G221700--Sobic001G333000 Sobic003G221700--Sobic006G111600 Sobic003G221700--Sobic004G179200 Sobic003G221700--Sobic003G330100 Sobic002G251400 Sobic002G251400 Sobic003G221700--Sobic002G251400 Sobic003G221700--Sobic002G131700 Sobic003G245800 Sobic003G245800 Sobic003G221700--Sobic003G245800 Sobic003G221700--Sobic009G234200 Sobic003G221700--Sobic008G072300 Sobic007G075700 Sobic007G075700 Sobic003G191000--Sobic007G075700 Sobic001G170900 Sobic001G170900 Sobic003G191000--Sobic001G170900 Sobic005G056201 Sobic005G056201 Sobic003G191000--Sobic005G056201 Sobic003G234101 Sobic003G234101 Sobic003G191000--Sobic003G234101 Sobic007G009600 Sobic007G009600 Sobic003G191000--Sobic007G009600 Sobic009G161100 Sobic009G161100 Sobic003G191000--Sobic009G161100 Sobic008G123600 Sobic008G123600 Sobic003G191000--Sobic008G123600 Sobic003G191000--Sobic003G110100 Sobic005G200600 Sobic005G200600 Sobic003G191000--Sobic005G200600 Sobic002G345200--Sobic003G245800 Sobic002G345200--Sobic006G197700 Sobic002G345200--Sobic003G330100 Sobic002G345200--Sobic004G250200 Sobic002G345200--Sobic003G221700 Sobic002G345200--Sobic008G072300 Sobic002G345200--Sobic006G111600 Sobic002G250100 Sobic002G250100 Sobic002G345200--Sobic002G250100 Sobic010G028000 Sobic010G028000 Sobic002G345200--Sobic010G028000 Sobic001G527100 Sobic001G527100 Sobic007G162300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic007G162300--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic007G162300--Sobic004G164100 Sobic007G162300--Sobic002G251400 Sobic003G328200 Sobic003G328200 Sobic007G162300--Sobic003G328200 Sobic002G288300 Sobic002G288300 Sobic007G162300--Sobic002G288300 Sobic001G240000 Sobic001G240000 Sobic007G162300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic007G162300--Sobic010G095200 Sobic001G531200 Sobic001G531200 Sobic007G162300--Sobic001G531200 Sobic004G193600--Sobic003G110100 Sobic009G124000 Sobic009G124000 Sobic004G193600--Sobic009G124000 Sobic004G301200 Sobic004G301200 Sobic004G193600--Sobic004G301200 Sobic006G161900 Sobic006G161900 Sobic004G193600--Sobic006G161900 Sobic002G083200 Sobic002G083200 Sobic004G193600--Sobic002G083200 Sobic001G067300 Sobic001G067300 Sobic004G193600--Sobic001G067300 Sobic010G052300 Sobic010G052300 Sobic004G193600--Sobic010G052300 Sobic009G073100 Sobic009G073100 Sobic004G193600--Sobic009G073100 Sobic004G144400 Sobic004G144400 Sobic004G193600--Sobic004G144400
Octagon: transcription factors


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