Gene annotation
Transcriptome id Sobic.009G200400.1
Synonym Sb09g025800
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
DUF584 domain containing protein, putative, expressed
UniProt A0A1B6P9T8
Pfam PF04520
Panther DB PTHR33083:SF1 PTHR33083
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29640 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os05g44260.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a017604 , Zm00025a056629 , Zm00025a027573
Brachypodium KQK05357
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G171300 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
2 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
3 Sobic.004G052401 - -
4 Sobic.001G343400 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
5 Sobic.003G234101 - -
6 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.003G435100 expressed protein -
8 Sobic.001G358700 heavy metal-associated domain containing protein, expressed -
9 Sobic.007G075700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
10 Sobic.001G208600 receptor kinase like protein, putative, expressed -
11 Sobic.009G125900 expressed protein -
12 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
14 Sobic.003G191000 FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
15 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
16 Sobic.001G334900 X8 domain containing protein, expressed -
17 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
18 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
19 Sobic.010G067500 OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
20 Sobic.004G116800 harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G200400 Sobic009G200400 Sobic010G171300 Sobic010G171300 Sobic009G200400--Sobic010G171300 Sobic010G052300 Sobic010G052300 Sobic009G200400--Sobic010G052300 Sobic004G052401 Sobic004G052401 Sobic009G200400--Sobic004G052401 Sobic001G343400 Sobic001G343400 Sobic009G200400--Sobic001G343400 Sobic003G234101 Sobic003G234101 Sobic009G200400--Sobic003G234101 Sobic003G371400 Sobic003G371400 Sobic009G200400--Sobic003G371400 Sobic003G435100 Sobic003G435100 Sobic009G200400--Sobic003G435100 Sobic001G358700 Sobic001G358700 Sobic009G200400--Sobic001G358700 Sobic007G075700 Sobic007G075700 Sobic009G200400--Sobic007G075700 Sobic010G171300--Sobic010G052300 Sobic010G171300--Sobic003G234101 Sobic010G171300--Sobic009G200400 Sobic010G171300--Sobic004G052401 Sobic006G256200 Sobic006G256200 Sobic010G171300--Sobic006G256200 Sobic010G171300--Sobic007G075700 Sobic006G161900 Sobic006G161900 Sobic010G171300--Sobic006G161900 Sobic010G171300--Sobic001G343400 Sobic005G004100 Sobic005G004100 Sobic010G171300--Sobic005G004100 Sobic010G052300--Sobic003G234101 Sobic010G052300--Sobic007G075700 Sobic010G052300--Sobic010G171300 Sobic010G052300--Sobic004G052401 Sobic010G052300--Sobic006G161900 Sobic009G073100 Sobic009G073100 Sobic010G052300--Sobic009G073100 Sobic010G240500 Sobic010G240500 Sobic010G052300--Sobic010G240500 Sobic010G052300--Sobic009G200400 Sobic010G052300--Sobic001G343400 Sobic004G052401--Sobic010G052300 Sobic004G052401--Sobic010G171300 Sobic004G052401--Sobic009G200400 Sobic005G093500 Sobic005G093500 Sobic004G052401--Sobic005G093500 Sobic002G041150 Sobic002G041150 Sobic004G052401--Sobic002G041150 Sobic004G052401--Sobic003G234101 Sobic004G052401--Sobic001G343400 Sobic004G052401--Sobic003G435100 Sobic004G052401--Sobic006G256200 Sobic001G343400--Sobic003G371400 Sobic001G343400--Sobic003G234101 Sobic004G290300 Sobic004G290300 Sobic001G343400--Sobic004G290300 Sobic001G140300 Sobic001G140300 Sobic001G343400--Sobic001G140300 Sobic005G112000 Sobic005G112000 Sobic001G343400--Sobic005G112000 Sobic005G145100 Sobic005G145100 Sobic001G343400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G343400--Sobic001G388000 Sobic001G343400--Sobic002G041150 Sobic008G055800 Sobic008G055800 Sobic001G343400--Sobic008G055800 Sobic003G234101--Sobic007G075700 Sobic003G234101--Sobic010G052300 Sobic010G240700 Sobic010G240700 Sobic003G234101--Sobic010G240700 Sobic003G234101--Sobic001G343400 Sobic003G234101--Sobic010G171300 Sobic003G234101--Sobic010G240500 Sobic003G234101--Sobic003G435100 Sobic006G249400 Sobic006G249400 Sobic003G234101--Sobic006G249400 Sobic010G240600 Sobic010G240600 Sobic003G234101--Sobic010G240600 Sobic003G371400--Sobic005G112000 Sobic003G371400--Sobic001G343400 Sobic003G371400--Sobic008G055800 Sobic009G221900 Sobic009G221900 Sobic003G371400--Sobic009G221900 Sobic003G082700 Sobic003G082700 Sobic003G371400--Sobic003G082700 Sobic001G208600 Sobic001G208600 Sobic003G371400--Sobic001G208600 Sobic003G378800 Sobic003G378800 Sobic003G371400--Sobic003G378800 Sobic003G099166 Sobic003G099166 Sobic003G371400--Sobic003G099166 Sobic002G083600 Sobic002G083600 Sobic003G371400--Sobic002G083600 Sobic003G435100--Sobic007G075700 Sobic003G435100--Sobic003G234101 Sobic003G191000 Sobic003G191000 Sobic003G435100--Sobic003G191000 Sobic003G435100--Sobic006G161900 Sobic003G435100--Sobic001G343400 Sobic003G435100--Sobic010G052300 Sobic003G435100--Sobic006G249400 Sobic003G435100--Sobic010G171300 Sobic001G170900 Sobic001G170900 Sobic003G435100--Sobic001G170900 Sobic003G239100 Sobic003G239100 Sobic001G358700--Sobic003G239100 Sobic001G358700--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic001G358700--Sobic002G030800 Sobic001G358700--Sobic005G145100 Sobic002G053900 Sobic002G053900 Sobic001G358700--Sobic002G053900 Sobic005G127200 Sobic005G127200 Sobic001G358700--Sobic005G127200 Sobic004G266700 Sobic004G266700 Sobic001G358700--Sobic004G266700 Sobic001G358700--Sobic003G082700 Sobic002G003500 Sobic002G003500 Sobic001G358700--Sobic002G003500 Sobic007G075700--Sobic010G240700 Sobic007G075700--Sobic003G234101 Sobic007G075700--Sobic010G240600 Sobic007G075700--Sobic010G240500 Sobic007G009600 Sobic007G009600 Sobic007G075700--Sobic007G009600 Sobic002G416950 Sobic002G416950 Sobic007G075700--Sobic002G416950 Sobic007G170800 Sobic007G170800 Sobic007G075700--Sobic007G170800 Sobic007G075700--Sobic003G191000 Sobic004G060700 Sobic004G060700 Sobic007G075700--Sobic004G060700
Octagon: transcription factors


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