Gene annotation
Transcriptome id Sobic.002G041150.2,Sobic.002G041150.1,Sobic.002G041150.3
Synonym -
Functional annotation -
UniProt A0A1W0W291 , A0A1W0W241 , A0A1W0W274
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G093500 expressed protein -
2 Sobic.001G343400 3-beta-hydroxy-delta5-steroid dehydrogenase (At)(PubMedID : 27208977)@sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
3 Sobic.001G140300 glycosyl hydrolase family 10 protein, putative, expressed -
4 Sobic.001G358700 heavy metal-associated domain containing protein, expressed -
5 Sobic.004G052401 - -
6 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
8 Sobic.003G234101 - -
9 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.002G030650 - -
11 Sobic.010G052300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBL28 - F-box domain and LRR containing protein, expressed -
12 Sobic.002G194600 integral membrane protein, putative, expressed -
13 Sobic.007G176700 bZIP transcription factor domain containing protein, expressed -
14 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
15 Sobic.003G023600 peptide-N4-asparagine amidase A, putative, expressed -
16 Sobic.002G099100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
17 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
18 Sobic.001G388000 GTPase-activating protein, putative, expressed -
19 Sobic.005G145100 phospholipase A2, putative, expressed -
20 Sobic.010G133932 - -


Gene co-expression network
sample Sobic002G041150 Sobic002G041150 Sobic005G093500 Sobic005G093500 Sobic002G041150--Sobic005G093500 Sobic001G343400 Sobic001G343400 Sobic002G041150--Sobic001G343400 Sobic001G140300 Sobic001G140300 Sobic002G041150--Sobic001G140300 Sobic001G358700 Sobic001G358700 Sobic002G041150--Sobic001G358700 Sobic004G052401 Sobic004G052401 Sobic002G041150--Sobic004G052401 Sobic003G371400 Sobic003G371400 Sobic002G041150--Sobic003G371400 Sobic003G239100 Sobic003G239100 Sobic002G041150--Sobic003G239100 Sobic003G234101 Sobic003G234101 Sobic002G041150--Sobic003G234101 Sobic003G082700 Sobic003G082700 Sobic002G041150--Sobic003G082700 Sobic005G093500--Sobic002G041150 Sobic005G071800 Sobic005G071800 Sobic005G093500--Sobic005G071800 Sobic005G093500--Sobic003G371400 Sobic004G085500 Sobic004G085500 Sobic005G093500--Sobic004G085500 Sobic005G012800 Sobic005G012800 Sobic005G093500--Sobic005G012800 Sobic007G064900 Sobic007G064900 Sobic005G093500--Sobic007G064900 Sobic006G256200 Sobic006G256200 Sobic005G093500--Sobic006G256200 Sobic005G093500--Sobic004G052401 Sobic002G083600 Sobic002G083600 Sobic005G093500--Sobic002G083600 Sobic001G343400--Sobic003G371400 Sobic001G343400--Sobic003G234101 Sobic004G290300 Sobic004G290300 Sobic001G343400--Sobic004G290300 Sobic001G343400--Sobic001G140300 Sobic005G112000 Sobic005G112000 Sobic001G343400--Sobic005G112000 Sobic005G145100 Sobic005G145100 Sobic001G343400--Sobic005G145100 Sobic001G388000 Sobic001G388000 Sobic001G343400--Sobic001G388000 Sobic001G343400--Sobic002G041150 Sobic008G055800 Sobic008G055800 Sobic001G343400--Sobic008G055800 Sobic001G140300--Sobic001G343400 Sobic001G140300--Sobic005G112000 Sobic001G140300--Sobic003G082700 Sobic001G140300--Sobic003G239100 Sobic001G140300--Sobic004G290300 Sobic001G140300--Sobic003G371400 Sobic001G140300--Sobic001G358700 Sobic001G140300--Sobic005G145100 Sobic004G116800 Sobic004G116800 Sobic001G140300--Sobic004G116800 Sobic001G358700--Sobic003G239100 Sobic001G208600 Sobic001G208600 Sobic001G358700--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic001G358700--Sobic002G030800 Sobic001G358700--Sobic005G145100 Sobic002G053900 Sobic002G053900 Sobic001G358700--Sobic002G053900 Sobic005G127200 Sobic005G127200 Sobic001G358700--Sobic005G127200 Sobic004G266700 Sobic004G266700 Sobic001G358700--Sobic004G266700 Sobic001G358700--Sobic003G082700 Sobic002G003500 Sobic002G003500 Sobic001G358700--Sobic002G003500 Sobic010G052300 Sobic010G052300 Sobic004G052401--Sobic010G052300 Sobic010G171300 Sobic010G171300 Sobic004G052401--Sobic010G171300 Sobic009G200400 Sobic009G200400 Sobic004G052401--Sobic009G200400 Sobic004G052401--Sobic005G093500 Sobic004G052401--Sobic002G041150 Sobic004G052401--Sobic003G234101 Sobic004G052401--Sobic001G343400 Sobic003G435100 Sobic003G435100 Sobic004G052401--Sobic003G435100 Sobic004G052401--Sobic006G256200 Sobic003G371400--Sobic005G112000 Sobic003G371400--Sobic001G343400 Sobic003G371400--Sobic008G055800 Sobic009G221900 Sobic009G221900 Sobic003G371400--Sobic009G221900 Sobic003G371400--Sobic003G082700 Sobic003G371400--Sobic001G208600 Sobic003G378800 Sobic003G378800 Sobic003G371400--Sobic003G378800 Sobic003G099166 Sobic003G099166 Sobic003G371400--Sobic003G099166 Sobic003G371400--Sobic002G083600 Sobic003G239100--Sobic003G082700 Sobic009G008800 Sobic009G008800 Sobic003G239100--Sobic009G008800 Sobic003G352700 Sobic003G352700 Sobic003G239100--Sobic003G352700 Sobic003G239100--Sobic005G145100 Sobic003G239100--Sobic004G266700 Sobic003G239100--Sobic005G127200 Sobic003G239100--Sobic002G053900 Sobic003G239100--Sobic002G030800 Sobic001G484000 Sobic001G484000 Sobic003G239100--Sobic001G484000 Sobic007G075700 Sobic007G075700 Sobic003G234101--Sobic007G075700 Sobic003G234101--Sobic010G052300 Sobic010G240700 Sobic010G240700 Sobic003G234101--Sobic010G240700 Sobic003G234101--Sobic001G343400 Sobic003G234101--Sobic010G171300 Sobic010G240500 Sobic010G240500 Sobic003G234101--Sobic010G240500 Sobic003G234101--Sobic003G435100 Sobic006G249400 Sobic006G249400 Sobic003G234101--Sobic006G249400 Sobic010G240600 Sobic010G240600 Sobic003G234101--Sobic010G240600 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500
Octagon: transcription factors


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