Gene annotation
Transcriptome id Sobic.001G445900.1
Synonym Sb01g041900, SNP2, DWF4, CLM, CYP90B1, SAV1, PSC1
Functional annotation "CYP90B2(Ortholog in rice:Wu et al., 2008)" (PubMedID : 31659844)
cytochrome P450, putative, expressed
UniProt C5WRP9
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF37
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K09587; CYP90B1, steroid 22-alpha-hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G50660 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os03g12660.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a018212 , Zm00025a001444
Brachypodium KQK22730
Barley HORVU4Hr1G065440.19 , HORVU4Hr1G065440.18 , HORVU4Hr1G065440.17 , HORVU4Hr1G065440.16 , HORVU4Hr1G065440.15 , HORVU4Hr1G065440.14 , HORVU4Hr1G065440.13 , HORVU4Hr1G065440.12 , HORVU4Hr1G065440.10 , HORVU4Hr1G065440.7 , HORVU4Hr1G065440.6 , HORVU4Hr1G065440.5 , HORVU4Hr1G065440.4 , HORVU4Hr1G065440.3 , HORVU4Hr1G065440.2 , HORVU4Hr1G065440.1 , HORVU4Hr1G065440.9 , HORVU4Hr1G065440.8 , HORVU4Hr1G065440.20
Wheat TraesCS3A02G519000 , TraesCS3A02G519000 , TraesCS3A02G519000 , TraesCS4A02G078000 , TraesCS4A02G078000 , TraesCS4A02G078000 , TraesCS3D02G526300 , TraesCS3D02G526300 , TraesCS3D02G526400 , TraesCS4B02G234100 , TraesCS4D02G235200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
2 Sobic.004G187300 zinc finger protein, putative, expressed -
3 Sobic.006G216900 expressed protein -
4 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
5 Sobic.002G253400 FAD dependent oxidoreductase domain containing protein, expressed -
6 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
7 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
8 Sobic.003G248901 - -
9 Sobic.003G153800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein beta-fructofuranosidase (Os)(PubMedID : 27208977)@neutral/alkaline invertase, putative, expressed -
10 Sobic.008G085350 - -
11 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
12 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.003G151800 expressed protein -
14 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.008G111300 transporter family protein, putative, expressed -
16 Sobic.008G137800 expressed protein -
17 Sobic.005G133166 - -
18 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
19 Sobic.007G054100 stress-induced protein, putative, expressed -
20 Sobic.003G074500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III


Gene co-expression network
sample Sobic001G445900 Sobic001G445900 Sobic001G179100 Sobic001G179100 Sobic001G445900--Sobic001G179100 Sobic004G187300 Sobic004G187300 Sobic001G445900--Sobic004G187300 Sobic006G216900 Sobic006G216900 Sobic001G445900--Sobic006G216900 Sobic001G030500 Sobic001G030500 Sobic001G445900--Sobic001G030500 Sobic002G253400 Sobic002G253400 Sobic001G445900--Sobic002G253400 Sobic009G205600 Sobic009G205600 Sobic001G445900--Sobic009G205600 Sobic003G214000 Sobic003G214000 Sobic001G445900--Sobic003G214000 Sobic003G248901 Sobic003G248901 Sobic001G445900--Sobic003G248901 Sobic003G153800 Sobic003G153800 Sobic001G445900--Sobic003G153800 Sobic004G068700 Sobic004G068700 Sobic001G179100--Sobic004G068700 Sobic001G179100--Sobic003G214000 Sobic002G155900 Sobic002G155900 Sobic001G179100--Sobic002G155900 Sobic002G287000 Sobic002G287000 Sobic001G179100--Sobic002G287000 Sobic009G238100 Sobic009G238100 Sobic001G179100--Sobic009G238100 Sobic003G255100 Sobic003G255100 Sobic001G179100--Sobic003G255100 Sobic001G161300 Sobic001G161300 Sobic001G179100--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic001G179100--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic001G179100--Sobic002G366100 Sobic004G195800 Sobic004G195800 Sobic004G187300--Sobic004G195800 Sobic004G187300--Sobic003G153800 SobicK044407 SobicK044407 Sobic004G187300--SobicK044407 Sobic001G410450 Sobic001G410450 Sobic004G187300--Sobic001G410450 Sobic001G012000 Sobic001G012000 Sobic004G187300--Sobic001G012000 Sobic008G181801 Sobic008G181801 Sobic004G187300--Sobic008G181801 SobicK020500 SobicK020500 Sobic004G187300--SobicK020500 Sobic002G209100 Sobic002G209100 Sobic004G187300--Sobic002G209100 Sobic004G187300--Sobic009G205600 Sobic003G381300 Sobic003G381300 Sobic006G216900--Sobic003G381300 Sobic003G135800 Sobic003G135800 Sobic006G216900--Sobic003G135800 Sobic008G142600 Sobic008G142600 Sobic006G216900--Sobic008G142600 Sobic006G216900--Sobic002G366100 Sobic003G206800 Sobic003G206800 Sobic006G216900--Sobic003G206800 Sobic006G216900--Sobic001G445900 Sobic002G174900 Sobic002G174900 Sobic006G216900--Sobic002G174900 Sobic003G402200 Sobic003G402200 Sobic006G216900--Sobic003G402200 Sobic006G060800 Sobic006G060800 Sobic006G216900--Sobic006G060800 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic010G079700 Sobic010G079700 Sobic001G030500--Sobic010G079700 Sobic001G030500--Sobic001G179100 Sobic007G191900 Sobic007G191900 Sobic001G030500--Sobic007G191900 Sobic001G005500 Sobic001G005500 Sobic001G030500--Sobic001G005500 Sobic006G269400 Sobic006G269400 Sobic001G030500--Sobic006G269400 Sobic001G121100 Sobic001G121100 Sobic001G030500--Sobic001G121100 Sobic002G271600 Sobic002G271600 Sobic001G030500--Sobic002G271600 Sobic002G253400--Sobic008G181801 Sobic005G085500 Sobic005G085500 Sobic002G253400--Sobic005G085500 Sobic002G253400--SobicK044407 Sobic003G310200 Sobic003G310200 Sobic002G253400--Sobic003G310200 Sobic002G349400 Sobic002G349400 Sobic002G253400--Sobic002G349400 Sobic002G253400--Sobic001G012000 Sobic005G193600 Sobic005G193600 Sobic002G253400--Sobic005G193600 Sobic009G241500 Sobic009G241500 Sobic002G253400--Sobic009G241500 Sobic006G045000 Sobic006G045000 Sobic002G253400--Sobic006G045000 Sobic004G217700 Sobic004G217700 Sobic009G205600--Sobic004G217700 Sobic009G205600--Sobic003G402200 Sobic009G205600--Sobic002G271600 Sobic009G205600--Sobic001G410450 Sobic009G205600--Sobic007G014600 Sobic009G205600--Sobic004G195800 Sobic009G205600--Sobic002G209100 Sobic009G205600--Sobic006G060800 Sobic009G205600--Sobic004G187300 Sobic003G214000--Sobic001G179100 Sobic003G214000--Sobic004G068700 Sobic004G078600 Sobic004G078600 Sobic003G214000--Sobic004G078600 Sobic003G214000--Sobic002G155900 Sobic001G320700 Sobic001G320700 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic009G075100 Sobic009G075100 Sobic003G214000--Sobic009G075100 Sobic001G201800 Sobic001G201800 Sobic003G214000--Sobic001G201800 Sobic003G214000--Sobic008G111300 Sobic003G248901--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic003G248901--Sobic010G214200 Sobic003G248901--SobicK044407 Sobic003G248901--Sobic001G012000 Sobic003G378301 Sobic003G378301 Sobic003G248901--Sobic003G378301 Sobic001G056400 Sobic001G056400 Sobic003G248901--Sobic001G056400 Sobic003G248901--Sobic003G310200 Sobic006G123400 Sobic006G123400 Sobic003G248901--Sobic006G123400 Sobic003G248901--Sobic001G320700 Sobic003G153800--SobicK020500 Sobic003G153800--Sobic004G187300 Sobic004G096300 Sobic004G096300 Sobic003G153800--Sobic004G096300 Sobic001G293800 Sobic001G293800 Sobic003G153800--Sobic001G293800 Sobic003G153800--Sobic009G205600 Sobic003G264901 Sobic003G264901 Sobic003G153800--Sobic003G264901 Sobic007G071000 Sobic007G071000 Sobic003G153800--Sobic007G071000 Sobic003G153800--Sobic001G410450 Sobic006G152500 Sobic006G152500 Sobic003G153800--Sobic006G152500
Octagon: transcription factors


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