Gene annotation
Transcriptome id Sobic.002G062500.1
Synonym Sb02g005200, ALDH6B2
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt C5XBV0
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF183
NCBI CDD KOG2450; Aldehyde dehydrogenase
KEGG Orthology K00140; mmsA, iolA, malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G14170 : aldehyde dehydrogenase 6B2
RAP-DB (Rice) LOC_Os07g09060.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a045270
Brachypodium KQK20504 , KQK20502 , KQK20503
Barley HORVU2Hr1G107520.1 , HORVU2Hr1G107550.1 , HORVU2Hr1G107550.2 , HORVU2Hr1G107550.3 , HORVU2Hr1G107550.4 , HORVU2Hr1G107550.5
Wheat TraesCS2A02G477900 , TraesCS2D02G477100 , TraesCS2D02G477100 , TraesCS2B02G501200
Populus -


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cDNA sequences
Sobic.002G062500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G252900 DNA repair ATPase-related, putative, expressed -
2 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
3 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
4 Sobic.002G385300 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.005G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
7 Sobic.010G168200 HAD superfamily phosphatase, putative, expressed -
8 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
9 Sobic.002G390400 expressed protein -
10 Sobic.004G345100 expressed protein -
11 Sobic.007G018200 RNA recognition motif containing protein, putative, expressed -
12 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
13 Sobic.007G194800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
14 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
15 Sobic.002G314900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G091000 glutaredoxin domain containing protein, putative, expressed -
17 Sobic.003G062400 PHD finger protein, putative, expressed -
18 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
19 Sobic.003G307900 BSD domain containing protein, expressed -
20 Sobic.003G146900 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic002G062500 Sobic002G062500 Sobic002G252900 Sobic002G252900 Sobic002G062500--Sobic002G252900 Sobic006G261100 Sobic006G261100 Sobic002G062500--Sobic006G261100 Sobic002G359900 Sobic002G359900 Sobic002G062500--Sobic002G359900 Sobic002G385300 Sobic002G385300 Sobic002G062500--Sobic002G385300 Sobic009G055600 Sobic009G055600 Sobic002G062500--Sobic009G055600 Sobic005G030100 Sobic005G030100 Sobic002G062500--Sobic005G030100 Sobic010G168200 Sobic010G168200 Sobic002G062500--Sobic010G168200 Sobic001G196700 Sobic001G196700 Sobic002G062500--Sobic001G196700 Sobic002G390400 Sobic002G390400 Sobic002G062500--Sobic002G390400 Sobic002G252900--Sobic002G062500 Sobic004G242000 Sobic004G242000 Sobic002G252900--Sobic004G242000 Sobic009G030400 Sobic009G030400 Sobic002G252900--Sobic009G030400 Sobic004G345100 Sobic004G345100 Sobic002G252900--Sobic004G345100 Sobic002G252900--Sobic002G385300 Sobic009G060400 Sobic009G060400 Sobic002G252900--Sobic009G060400 Sobic010G250100 Sobic010G250100 Sobic002G252900--Sobic010G250100 Sobic002G252900--Sobic002G390400 Sobic010G256200 Sobic010G256200 Sobic002G252900--Sobic010G256200 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic010G253100 Sobic010G253100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic002G359900--Sobic006G261100 Sobic002G359900--Sobic006G120800 Sobic003G031200 Sobic003G031200 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic002G385300--Sobic002G390400 Sobic002G385300--Sobic002G252900 Sobic008G111700 Sobic008G111700 Sobic002G385300--Sobic008G111700 Sobic008G116600 Sobic008G116600 Sobic002G385300--Sobic008G116600 Sobic001G498400 Sobic001G498400 Sobic002G385300--Sobic001G498400 Sobic002G385300--Sobic009G030400 Sobic002G385300--Sobic006G261100 Sobic001G135500 Sobic001G135500 Sobic002G385300--Sobic001G135500 Sobic002G385300--Sobic002G062500 Sobic009G055600--Sobic001G196700 Sobic009G055600--Sobic009G030400 Sobic009G132600 Sobic009G132600 Sobic009G055600--Sobic009G132600 Sobic008G160500 Sobic008G160500 Sobic009G055600--Sobic008G160500 Sobic009G237700 Sobic009G237700 Sobic009G055600--Sobic009G237700 Sobic009G055600--Sobic002G403200 Sobic010G207400 Sobic010G207400 Sobic009G055600--Sobic010G207400 Sobic006G139000 Sobic006G139000 Sobic009G055600--Sobic006G139000 Sobic010G168500 Sobic010G168500 Sobic009G055600--Sobic010G168500 Sobic005G030100--Sobic009G030400 Sobic005G030100--Sobic002G390400 Sobic005G030100--Sobic010G207400 Sobic007G150700 Sobic007G150700 Sobic005G030100--Sobic007G150700 Sobic003G161800 Sobic003G161800 Sobic005G030100--Sobic003G161800 Sobic008G052200 Sobic008G052200 Sobic005G030100--Sobic008G052200 Sobic006G061100 Sobic006G061100 Sobic005G030100--Sobic006G061100 Sobic001G423300 Sobic001G423300 Sobic005G030100--Sobic001G423300 Sobic005G030100--Sobic008G160500 Sobic001G289400 Sobic001G289400 Sobic010G168200--Sobic001G289400 Sobic001G106400 Sobic001G106400 Sobic010G168200--Sobic001G106400 Sobic010G168200--Sobic001G458200 Sobic006G066600 Sobic006G066600 Sobic010G168200--Sobic006G066600 Sobic001G233532 Sobic001G233532 Sobic010G168200--Sobic001G233532 Sobic009G256200 Sobic009G256200 Sobic010G168200--Sobic009G256200 Sobic010G168200--Sobic002G062500 Sobic008G134900 Sobic008G134900 Sobic010G168200--Sobic008G134900 Sobic010G168200--Sobic002G359900 Sobic006G132400 Sobic006G132400 Sobic001G196700--Sobic006G132400 Sobic001G367700 Sobic001G367700 Sobic001G196700--Sobic001G367700 Sobic001G196700--Sobic010G168500 Sobic003G376000 Sobic003G376000 Sobic001G196700--Sobic003G376000 Sobic002G077600 Sobic002G077600 Sobic001G196700--Sobic002G077600 Sobic007G049400 Sobic007G049400 Sobic001G196700--Sobic007G049400 Sobic001G112250 Sobic001G112250 Sobic001G196700--Sobic001G112250 Sobic005G112066 Sobic005G112066 Sobic001G196700--Sobic005G112066 Sobic001G253501 Sobic001G253501 Sobic001G196700--Sobic001G253501 Sobic002G390400--Sobic001G135500 Sobic003G415100 Sobic003G415100 Sobic002G390400--Sobic003G415100 Sobic009G069200 Sobic009G069200 Sobic002G390400--Sobic009G069200 Sobic005G198200 Sobic005G198200 Sobic002G390400--Sobic005G198200 Sobic002G390400--Sobic005G030100 Sobic002G390400--Sobic009G030400 Sobic009G113100 Sobic009G113100 Sobic002G390400--Sobic009G113100 Sobic008G156200 Sobic008G156200 Sobic002G390400--Sobic008G156200 Sobic001G429200 Sobic001G429200 Sobic002G390400--Sobic001G429200
Octagon: transcription factors


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