Gene annotation
Transcriptome id Sobic.010G091000.5,Sobic.010G091000.1,Sobic.010G091000.6,Sobic.010G091000.2,Sobic.010G091000.7
Synonym Sb10g007910
Functional annotation glutaredoxin domain containing protein, putative, expressed
UniProt C5Z711
Pfam PF04784 PF00610 PF00462 PF00462 PF00610 PF04784
Panther DB PTHR23054 PTHR23054:SF27 PTHR23054:SF27 PTHR23054
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity GO:0015035protein disulfide oxidoreductase activity GO:0015035protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT3G11920 : glutaredoxin-related
RAP-DB (Rice) LOC_Os06g12030.1,LOC_Os06g12030.2 : glutaredoxin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042589
Brachypodium PNT76178
Barley HORVU7Hr1G037510.4 , HORVU7Hr1G037510.7 , HORVU7Hr1G037510.1 , HORVU7Hr1G037510.5 , HORVU7Hr1G037510.6 , HORVU7Hr1G037510.3 , HORVU7Hr1G037510.2 , HORVU7Hr1G037510.9 , HORVU7Hr1G037510.8 , HORVU7Hr1G037510.11 , HORVU7Hr1G037510.13 , HORVU7Hr1G037510.12 , HORVU7Hr1G037510.15 , HORVU7Hr1G037510.14 , HORVU7Hr1G037510.17 , HORVU7Hr1G037510.16 , HORVU7Hr1G037510.10
Wheat TraesCS7A02G182500 , TraesCS7B02G087400 , TraesCS7D02G183900 , TraesCS7D02G183900 , TraesCS7D02G183900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
2 Sobic.009G193300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
3 Sobic.004G042100 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.002G002500 tobamovirus multiplication protein, putative, expressed -
5 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
6 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
7 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
8 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
10 Sobic.010G040800 RNA recognition motif containing protein, putative, expressed -
11 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
12 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
13 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
14 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
15 Sobic.002G362300 prefoldin, putative, expressed -
16 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
17 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.005G181000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
19 Sobic.002G062500 aldehyde dehydrogenase, putative, expressed K00140: mmsA, iolA, malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase
20 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit


Gene co-expression network
sample Sobic010G091000 Sobic010G091000 Sobic009G216000 Sobic009G216000 Sobic010G091000--Sobic009G216000 Sobic009G193300 Sobic009G193300 Sobic010G091000--Sobic009G193300 Sobic004G042100 Sobic004G042100 Sobic010G091000--Sobic004G042100 Sobic002G002500 Sobic002G002500 Sobic010G091000--Sobic002G002500 Sobic001G221100 Sobic001G221100 Sobic010G091000--Sobic001G221100 Sobic007G202600 Sobic007G202600 Sobic010G091000--Sobic007G202600 Sobic006G261100 Sobic006G261100 Sobic010G091000--Sobic006G261100 Sobic002G045400 Sobic002G045400 Sobic010G091000--Sobic002G045400 Sobic010G188400 Sobic010G188400 Sobic010G091000--Sobic010G188400 Sobic003G433500 Sobic003G433500 Sobic009G216000--Sobic003G433500 Sobic003G355000 Sobic003G355000 Sobic009G216000--Sobic003G355000 Sobic009G216000--Sobic002G045400 Sobic005G030300 Sobic005G030300 Sobic009G216000--Sobic005G030300 Sobic001G371000 Sobic001G371000 Sobic009G216000--Sobic001G371000 Sobic004G013600 Sobic004G013600 Sobic009G216000--Sobic004G013600 Sobic009G198100 Sobic009G198100 Sobic009G216000--Sobic009G198100 Sobic002G362300 Sobic002G362300 Sobic009G216000--Sobic002G362300 Sobic009G216000--Sobic006G261100 Sobic009G193300--Sobic007G202600 Sobic007G041500 Sobic007G041500 Sobic009G193300--Sobic007G041500 Sobic009G193300--Sobic003G355000 Sobic007G119200 Sobic007G119200 Sobic009G193300--Sobic007G119200 Sobic003G005200 Sobic003G005200 Sobic009G193300--Sobic003G005200 Sobic001G408200 Sobic001G408200 Sobic009G193300--Sobic001G408200 Sobic005G143400 Sobic005G143400 Sobic009G193300--Sobic005G143400 Sobic001G517500 Sobic001G517500 Sobic009G193300--Sobic001G517500 Sobic006G252700 Sobic006G252700 Sobic009G193300--Sobic006G252700 Sobic007G130600 Sobic007G130600 Sobic004G042100--Sobic007G130600 Sobic004G034400 Sobic004G034400 Sobic004G042100--Sobic004G034400 Sobic009G175900 Sobic009G175900 Sobic004G042100--Sobic009G175900 Sobic003G239900 Sobic003G239900 Sobic004G042100--Sobic003G239900 Sobic005G181000 Sobic005G181000 Sobic004G042100--Sobic005G181000 Sobic006G124900 Sobic006G124900 Sobic004G042100--Sobic006G124900 Sobic004G042100--Sobic001G371000 Sobic010G190600 Sobic010G190600 Sobic004G042100--Sobic010G190600 Sobic004G042100--Sobic001G221100 Sobic009G022100 Sobic009G022100 Sobic002G002500--Sobic009G022100 Sobic002G067800 Sobic002G067800 Sobic002G002500--Sobic002G067800 Sobic008G073000 Sobic008G073000 Sobic002G002500--Sobic008G073000 Sobic002G002500--Sobic002G045400 Sobic008G165100 Sobic008G165100 Sobic002G002500--Sobic008G165100 Sobic002G002500--Sobic003G433500 Sobic005G059100 Sobic005G059100 Sobic002G002500--Sobic005G059100 Sobic002G002500--Sobic009G216000 Sobic002G159200 Sobic002G159200 Sobic002G002500--Sobic002G159200 Sobic001G039700 Sobic001G039700 Sobic001G221100--Sobic001G039700 Sobic009G032300 Sobic009G032300 Sobic001G221100--Sobic009G032300 Sobic010G042900 Sobic010G042900 Sobic001G221100--Sobic010G042900 Sobic003G145900 Sobic003G145900 Sobic001G221100--Sobic003G145900 Sobic004G027100 Sobic004G027100 Sobic001G221100--Sobic004G027100 Sobic001G221100--Sobic004G034400 Sobic004G330900 Sobic004G330900 Sobic001G221100--Sobic004G330900 Sobic005G014950 Sobic005G014950 Sobic001G221100--Sobic005G014950 Sobic002G197100 Sobic002G197100 Sobic001G221100--Sobic002G197100 Sobic010G083000 Sobic010G083000 Sobic007G202600--Sobic010G083000 Sobic007G202600--Sobic007G041500 Sobic002G189400 Sobic002G189400 Sobic007G202600--Sobic002G189400 Sobic007G202600--Sobic004G330900 Sobic004G282400 Sobic004G282400 Sobic007G202600--Sobic004G282400 Sobic007G202600--Sobic010G188400 Sobic002G152200 Sobic002G152200 Sobic007G202600--Sobic002G152200 Sobic007G202600--Sobic009G193300 Sobic006G114500 Sobic006G114500 Sobic007G202600--Sobic006G114500 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic002G045400--Sobic008G073000 Sobic002G045400--Sobic003G355000 Sobic002G045400--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic002G045400--Sobic008G174300 Sobic008G101800 Sobic008G101800 Sobic002G045400--Sobic008G101800 Sobic002G045400--Sobic009G198100 Sobic002G045400--Sobic009G216000 Sobic010G202600 Sobic010G202600 Sobic002G045400--Sobic010G202600 Sobic002G045400--Sobic005G030300 Sobic010G274500 Sobic010G274500 Sobic010G188400--Sobic010G274500 Sobic010G188400--Sobic007G202600 Sobic008G147700 Sobic008G147700 Sobic010G188400--Sobic008G147700 Sobic001G120300 Sobic001G120300 Sobic010G188400--Sobic001G120300 Sobic001G427100 Sobic001G427100 Sobic010G188400--Sobic001G427100 Sobic010G188400--Sobic003G145900 Sobic003G305200 Sobic003G305200 Sobic010G188400--Sobic003G305200 Sobic009G148300 Sobic009G148300 Sobic010G188400--Sobic009G148300 Sobic002G303000 Sobic002G303000 Sobic010G188400--Sobic002G303000
Octagon: transcription factors


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