Gene annotation
Transcriptome id Sobic.004G088700.3,Sobic.004G088700.2,Sobic.004G088700.1
Synonym
Functional annotation expressed protein
UniProt A0A194YNH5
Pfam PF14990
Panther DB PTHR28492 PTHR28492:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26055 : -
RAP-DB (Rice) LOC_Os09g07614.1 : expressed protein
MaizeGDB (Corn) Zm00025a034591
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
2 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
3 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
4 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
5 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
6 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
7 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
8 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
9 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
10 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
11 Sobic.002G059000 OsFBX237 - F-box domain containing protein, expressed -
12 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
13 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
14 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2
15 Sobic.003G121600 gb protein, putative, expressed -
16 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
17 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
18 Sobic.002G027800 mitochondrial 60S ribosomal protein L5, putative, expressed -
19 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
20 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase


Gene co-expression network
sample Sobic004G088700 Sobic004G088700 Sobic003G148900 Sobic003G148900 Sobic004G088700--Sobic003G148900 Sobic007G117800 Sobic007G117800 Sobic004G088700--Sobic007G117800 Sobic002G306600 Sobic002G306600 Sobic004G088700--Sobic002G306600 Sobic001G458200 Sobic001G458200 Sobic004G088700--Sobic001G458200 Sobic003G224300 Sobic003G224300 Sobic004G088700--Sobic003G224300 Sobic010G059700 Sobic010G059700 Sobic004G088700--Sobic010G059700 Sobic007G192100 Sobic007G192100 Sobic004G088700--Sobic007G192100 Sobic002G044000 Sobic002G044000 Sobic004G088700--Sobic002G044000 Sobic003G128300 Sobic003G128300 Sobic004G088700--Sobic003G128300 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G148900--Sobic003G128300 Sobic003G148900--Sobic003G224300 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic002G401700 Sobic002G401700 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic002G306600--Sobic010G059700 Sobic002G306600--Sobic001G458200 Sobic002G306600--Sobic003G128300 Sobic001G157600 Sobic001G157600 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic002G306600--Sobic004G088700 Sobic003G192000 Sobic003G192000 Sobic001G458200--Sobic003G192000 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic002G359900 Sobic002G359900 Sobic001G458200--Sobic002G359900 Sobic002G093900 Sobic002G093900 Sobic001G458200--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic001G458200--Sobic008G134900 Sobic001G458200--Sobic003G148900 Sobic001G458200--Sobic002G306600 Sobic001G458200--Sobic002G044000 Sobic001G035400 Sobic001G035400 Sobic003G224300--Sobic001G035400 Sobic003G224300--Sobic003G148900 Sobic002G087000 Sobic002G087000 Sobic003G224300--Sobic002G087000 Sobic001G392800 Sobic001G392800 Sobic003G224300--Sobic001G392800 Sobic003G224300--Sobic010G059700 Sobic009G164700 Sobic009G164700 Sobic003G224300--Sobic009G164700 Sobic001G402600 Sobic001G402600 Sobic003G224300--Sobic001G402600 Sobic007G024200 Sobic007G024200 Sobic003G224300--Sobic007G024200 Sobic010G277000 Sobic010G277000 Sobic003G224300--Sobic010G277000 Sobic007G036800 Sobic007G036800 Sobic010G059700--Sobic007G036800 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic010G059700--Sobic003G148900 Sobic004G145600 Sobic004G145600 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G192100--Sobic007G117800 Sobic009G201800 Sobic009G201800 Sobic002G044000--Sobic009G201800 Sobic003G358300 Sobic003G358300 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic001G285300 Sobic001G285300 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic004G032000 Sobic004G032000 Sobic002G044000--Sobic004G032000 Sobic002G044000--Sobic001G126200 Sobic007G152400 Sobic007G152400 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic003G132000 Sobic003G132000 Sobic003G128300--Sobic003G132000 Sobic003G128300--Sobic001G458200 Sobic003G128300--Sobic001G487100 Sobic003G128300--Sobic003G148900 Sobic004G320100 Sobic004G320100 Sobic003G128300--Sobic004G320100 Sobic003G046300 Sobic003G046300 Sobic003G128300--Sobic003G046300 Sobic003G128300--Sobic002G306600 Sobic008G103300 Sobic008G103300 Sobic003G128300--Sobic008G103300 Sobic009G258400 Sobic009G258400 Sobic003G128300--Sobic009G258400
Octagon: transcription factors


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