Gene annotation
Transcriptome id Sobic.002G059000.1
Synonym Sb02g004950
Functional annotation OsFBX237 - F-box domain containing protein, expressed
UniProt A0A1W0W2L1
Pfam PF00646
Panther DB PTHR32133:SF142 PTHR32133
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35050.1 : OsFBX237 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
2 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
3 Sobic.004G241600 MAGE-8 antigen-related, putative, expressed -
4 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
6 Sobic.007G146600 conserved oligomeric Golgi complex component 3, putative, expressed -
7 Sobic.009G086200 ubiquitin-conjugating enzyme E2 O, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.002G399500 SNARE associated Golgi protein, putative, expressed -
9 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
10 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
11 Sobic.004G088700 expressed protein -
12 Sobic.007G158900 expressed protein -
13 Sobic.006G222500 expressed protein -
14 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
15 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
16 Sobic.009G059400 expressed protein -
17 Sobic.008G108500 histone deacetylase 6, putative, expressed -
18 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
19 Sobic.010G185100 RNA polymerase Rpc34 subunit family protein, expressed K03025: RPC6, DNA-directed RNA polymerase III subunit RPC6
20 Sobic.002G027800 mitochondrial 60S ribosomal protein L5, putative, expressed -


Gene co-expression network
sample Sobic002G059000 Sobic002G059000 Sobic002G267400 Sobic002G267400 Sobic002G059000--Sobic002G267400 Sobic007G148400 Sobic007G148400 Sobic002G059000--Sobic007G148400 Sobic004G241600 Sobic004G241600 Sobic002G059000--Sobic004G241600 Sobic007G192100 Sobic007G192100 Sobic002G059000--Sobic007G192100 Sobic003G148900 Sobic003G148900 Sobic002G059000--Sobic003G148900 Sobic007G146600 Sobic007G146600 Sobic002G059000--Sobic007G146600 Sobic009G086200 Sobic009G086200 Sobic002G059000--Sobic009G086200 Sobic002G399500 Sobic002G399500 Sobic002G059000--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic002G059000--Sobic007G117800 Sobic002G267400--Sobic003G148900 Sobic002G267400--Sobic002G059000 Sobic002G357900 Sobic002G357900 Sobic002G267400--Sobic002G357900 Sobic002G267400--Sobic007G192100 Sobic001G036700 Sobic001G036700 Sobic002G267400--Sobic001G036700 Sobic008G111800 Sobic008G111800 Sobic002G267400--Sobic008G111800 Sobic003G062400 Sobic003G062400 Sobic002G267400--Sobic003G062400 Sobic004G256300 Sobic004G256300 Sobic002G267400--Sobic004G256300 Sobic007G081900 Sobic007G081900 Sobic002G267400--Sobic007G081900 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic005G178950 Sobic005G178950 Sobic004G241600--Sobic005G178950 Sobic006G091000 Sobic006G091000 Sobic004G241600--Sobic006G091000 Sobic010G235700 Sobic010G235700 Sobic004G241600--Sobic010G235700 Sobic009G059400 Sobic009G059400 Sobic004G241600--Sobic009G059400 Sobic004G241600--Sobic002G059000 Sobic001G326600 Sobic001G326600 Sobic004G241600--Sobic001G326600 Sobic003G222700 Sobic003G222700 Sobic004G241600--Sobic003G222700 Sobic003G205100 Sobic003G205100 Sobic004G241600--Sobic003G205100 Sobic007G031300 Sobic007G031300 Sobic004G241600--Sobic007G031300 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic007G192100--Sobic002G399500 Sobic007G192100--Sobic007G117800 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic007G146600--Sobic007G148400 Sobic001G343000 Sobic001G343000 Sobic007G146600--Sobic001G343000 Sobic007G146600--Sobic006G222500 Sobic009G063800 Sobic009G063800 Sobic007G146600--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic007G146600--Sobic002G182000 Sobic003G150900 Sobic003G150900 Sobic007G146600--Sobic003G150900 Sobic003G393200 Sobic003G393200 Sobic007G146600--Sobic003G393200 Sobic005G114800 Sobic005G114800 Sobic007G146600--Sobic005G114800 Sobic010G250000 Sobic010G250000 Sobic007G146600--Sobic010G250000 Sobic009G086200--Sobic002G176400 Sobic009G086200--Sobic001G036700 Sobic001G285300 Sobic001G285300 Sobic009G086200--Sobic001G285300 Sobic001G532100 Sobic001G532100 Sobic009G086200--Sobic001G532100 Sobic003G043400 Sobic003G043400 Sobic009G086200--Sobic003G043400 Sobic009G086200--Sobic007G192100 Sobic004G048700 Sobic004G048700 Sobic009G086200--Sobic004G048700 Sobic009G086200--Sobic007G038800 Sobic009G086200--Sobic008G108500 Sobic002G399500--Sobic007G192100 Sobic001G061200 Sobic001G061200 Sobic002G399500--Sobic001G061200 Sobic002G029300 Sobic002G029300 Sobic002G399500--Sobic002G029300 Sobic002G399500--Sobic003G148900 Sobic002G040700 Sobic002G040700 Sobic002G399500--Sobic002G040700 Sobic001G122000 Sobic001G122000 Sobic002G399500--Sobic001G122000 Sobic003G382900 Sobic003G382900 Sobic002G399500--Sobic003G382900 Sobic002G399500--Sobic001G036700 Sobic002G401700 Sobic002G401700 Sobic002G399500--Sobic002G401700 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic004G159000 Sobic004G159000 Sobic007G117800--Sobic004G159000 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200
Octagon: transcription factors


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