Gene annotation
Transcriptome id Sobic.010G065600.1
Synonym Sb10g005660
Functional annotation expressed protein
UniProt C5Z5I5
Pfam -
Panther DB PTHR36797
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16950 : -
RAP-DB (Rice) LOC_Os06g08510.1 : expressed protein
MaizeGDB (Corn) Zm00025a049779
Brachypodium KQK19278 , KQK19279 , KQK19274 , KQK19275 , KQK19276 , KQK19277 , KQK19273 , PNT76350
Barley HORVU7Hr1G030270.1 , HORVU7Hr1G030270.3 , HORVU7Hr1G030270.2 , HORVU7Hr1G030270.5 , HORVU7Hr1G030270.4 , HORVU7Hr1G030270.6
Wheat TraesCS7A02G147600 , TraesCS7D02G149500
Populus -


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cDNA sequences
Sobic.010G065600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G129300 uridine kinase, putative, expressed -
2 Sobic.001G229300 expressed protein -
3 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
4 Sobic.003G023200 DNA repair protein Rad51, putative, expressed K10870: RAD51L2, RAD51-like protein 2
5 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
6 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
7 Sobic.010G235700 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
8 Sobic.002G239601 - -
9 Sobic.002G208400 regulator protein, putative, expressed -
10 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
11 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
12 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
13 Sobic.002G369701 - K06877: DEAD/DEAH box helicase domain-containing protein
14 Sobic.003G337500 WRKY22, expressed -
15 Sobic.004G241600 MAGE-8 antigen-related, putative, expressed -
16 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova
17 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
18 Sobic.006G198400 phosphoenolpyruvate carboxykinase, putative, expressed -
19 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
20 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic010G065600 Sobic010G065600 Sobic003G129300 Sobic003G129300 Sobic010G065600--Sobic003G129300 Sobic001G229300 Sobic001G229300 Sobic010G065600--Sobic001G229300 Sobic001G123600 Sobic001G123600 Sobic010G065600--Sobic001G123600 Sobic003G023200 Sobic003G023200 Sobic010G065600--Sobic003G023200 Sobic003G222700 Sobic003G222700 Sobic010G065600--Sobic003G222700 Sobic009G063800 Sobic009G063800 Sobic010G065600--Sobic009G063800 Sobic010G235700 Sobic010G235700 Sobic010G065600--Sobic010G235700 Sobic002G239601 Sobic002G239601 Sobic010G065600--Sobic002G239601 Sobic002G208400 Sobic002G208400 Sobic010G065600--Sobic002G208400 Sobic003G129300--Sobic001G229300 Sobic003G129300--Sobic001G123600 Sobic002G142700 Sobic002G142700 Sobic003G129300--Sobic002G142700 Sobic003G129300--Sobic010G065600 Sobic003G129300--Sobic002G208400 Sobic003G129300--Sobic009G063800 Sobic003G119900 Sobic003G119900 Sobic003G129300--Sobic003G119900 Sobic001G191900 Sobic001G191900 Sobic003G129300--Sobic001G191900 Sobic001G465500 Sobic001G465500 Sobic003G129300--Sobic001G465500 Sobic001G229300--Sobic001G123600 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic003G010900 Sobic003G010900 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic001G229300--Sobic003G222700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic006G191200 Sobic006G191200 Sobic001G123600--Sobic006G191200 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic007G034200 Sobic007G034200 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic009G120400 Sobic009G120400 Sobic001G123600--Sobic009G120400 Sobic003G299500 Sobic003G299500 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic003G023200--Sobic002G066800 Sobic006G212900 Sobic006G212900 Sobic003G023200--Sobic006G212900 Sobic010G250000 Sobic010G250000 Sobic003G023200--Sobic010G250000 Sobic003G256800 Sobic003G256800 Sobic003G023200--Sobic003G256800 Sobic001G097900 Sobic001G097900 Sobic003G023200--Sobic001G097900 Sobic005G087300 Sobic005G087300 Sobic003G023200--Sobic005G087300 Sobic002G426100 Sobic002G426100 Sobic003G023200--Sobic002G426100 Sobic003G023200--Sobic001G229300 Sobic007G122700 Sobic007G122700 Sobic003G023200--Sobic007G122700 Sobic003G222700--Sobic004G256300 Sobic001G467100 Sobic001G467100 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic007G022700 Sobic007G022700 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic003G222700--Sobic001G229300 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic002G182000 Sobic002G182000 Sobic009G063800--Sobic002G182000 Sobic009G063800--Sobic010G250000 Sobic007G146600 Sobic007G146600 Sobic009G063800--Sobic007G146600 Sobic001G309200 Sobic001G309200 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic010G018900 Sobic010G018900 Sobic009G063800--Sobic010G018900 Sobic001G203600 Sobic001G203600 Sobic009G063800--Sobic001G203600 Sobic002G348400 Sobic002G348400 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500 Sobic004G278900 Sobic004G278900 Sobic010G235700--Sobic004G278900 Sobic010G235700--Sobic003G010900 Sobic007G081900 Sobic007G081900 Sobic010G235700--Sobic007G081900 Sobic004G241600 Sobic004G241600 Sobic010G235700--Sobic004G241600 Sobic010G235700--Sobic001G123600 Sobic009G032200 Sobic009G032200 Sobic010G235700--Sobic009G032200 Sobic006G091000 Sobic006G091000 Sobic010G235700--Sobic006G091000 Sobic002G430900 Sobic002G430900 Sobic010G235700--Sobic002G430900 Sobic010G235700--Sobic010G269300 Sobic002G239601--Sobic002G386900 Sobic002G239601--Sobic001G123600 Sobic002G386600 Sobic002G386600 Sobic002G239601--Sobic002G386600 Sobic004G356200 Sobic004G356200 Sobic002G239601--Sobic004G356200 Sobic002G239601--Sobic007G034200 Sobic008G123300 Sobic008G123300 Sobic002G239601--Sobic008G123300 Sobic002G239601--Sobic003G360300 Sobic002G239601--Sobic003G299500 Sobic001G200200 Sobic001G200200 Sobic002G239601--Sobic001G200200 Sobic002G208400--Sobic002G142700 Sobic001G115500 Sobic001G115500 Sobic002G208400--Sobic001G115500 Sobic009G113100 Sobic009G113100 Sobic002G208400--Sobic009G113100 Sobic006G032600 Sobic006G032600 Sobic002G208400--Sobic006G032600 Sobic003G008600 Sobic003G008600 Sobic002G208400--Sobic003G008600 Sobic004G030400 Sobic004G030400 Sobic002G208400--Sobic004G030400 Sobic003G259600 Sobic003G259600 Sobic002G208400--Sobic003G259600 Sobic002G208400--Sobic001G123600 Sobic002G208400--Sobic003G129300
Octagon: transcription factors


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