Gene annotation
Transcriptome id Sobic.008G143800.1,Sobic.008G143800.2
Synonym 1, CYCA3, Sb08g019410
Functional annotation cyclin, putative, expressed
UniProt C5YQG8
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF100
NCBI CDD KOG0654; G2/Mitotic-specific cyclin A
KEGG Orthology K06627; cyclin-A
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G43080 : Cyclin A3;1
RAP-DB (Rice) LOC_Os12g39210.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a025174 , Zm00025a004390 , Zm00025a007431
Brachypodium KQK14221 , KQJ86127
Barley HORVU5Hr1G018820.10 , HORVU5Hr1G018820.8 , HORVU5Hr1G018820.9 , HORVU5Hr1G018820.2 , HORVU5Hr1G018820.3 , HORVU5Hr1G018820.4 , HORVU5Hr1G018820.5 , HORVU5Hr1G018820.6 , HORVU5Hr1G018820.7
Wheat TraesCS4A02G236700 , TraesCS4A02G236700 , TraesCS4B02G078300 , TraesCS5B02G078200 , TraesCS5D02G084700 , TraesCS5A02G072000 , TraesCS4D02G076900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
2 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
3 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
5 Sobic.006G094100 expressed protein -
6 Sobic.003G283600 HVA22, putative, expressed -
7 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
9 Sobic.004G331200 expressed protein -
10 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
11 Sobic.009G024900 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
12 Sobic.001G231200 expressed protein -
13 Sobic.001G530600 cyclin-dependent kinase A-1, putative, expressed K02206: cyclin-dependent kinase 2
14 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
15 Sobic.002G146601 - -
16 Sobic.010G191000 expressed protein -
17 Sobic.003G246800 GATA zinc finger domain containing protein, expressed -
18 Sobic.002G139000 OsFBX237 - F-box domain containing protein, expressed -
19 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.008G148500 expressed protein -


Gene co-expression network
sample Sobic008G143800 Sobic008G143800 Sobic001G140700 Sobic001G140700 Sobic008G143800--Sobic001G140700 Sobic008G165200 Sobic008G165200 Sobic008G143800--Sobic008G165200 Sobic008G096200 Sobic008G096200 Sobic008G143800--Sobic008G096200 Sobic001G468500 Sobic001G468500 Sobic008G143800--Sobic001G468500 Sobic006G094100 Sobic006G094100 Sobic008G143800--Sobic006G094100 Sobic003G283600 Sobic003G283600 Sobic008G143800--Sobic003G283600 Sobic009G124800 Sobic009G124800 Sobic008G143800--Sobic009G124800 Sobic001G296800 Sobic001G296800 Sobic008G143800--Sobic001G296800 Sobic004G331200 Sobic004G331200 Sobic008G143800--Sobic004G331200 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic003G212600 Sobic003G212600 Sobic001G140700--Sobic003G212600 Sobic001G268300 Sobic001G268300 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic009G087300 Sobic009G087300 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400 Sobic001G212600 Sobic001G212600 Sobic008G165200--Sobic001G212600 Sobic007G031300 Sobic007G031300 Sobic008G165200--Sobic007G031300 Sobic010G020900 Sobic010G020900 Sobic008G165200--Sobic010G020900 Sobic008G169400 Sobic008G169400 Sobic008G165200--Sobic008G169400 Sobic003G153900 Sobic003G153900 Sobic008G165200--Sobic003G153900 Sobic008G165200--Sobic001G296800 Sobic009G024900 Sobic009G024900 Sobic008G165200--Sobic009G024900 Sobic001G079900 Sobic001G079900 Sobic008G165200--Sobic001G079900 Sobic003G351900 Sobic003G351900 Sobic008G165200--Sobic003G351900 Sobic001G231200 Sobic001G231200 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic010G211800 Sobic010G211800 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic001G487200 Sobic001G487200 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic001G261549 Sobic001G261549 Sobic008G096200--Sobic001G261549 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic001G468500--Sobic004G331200 Sobic001G290500 Sobic001G290500 Sobic006G094100--Sobic001G290500 Sobic006G275500 Sobic006G275500 Sobic006G094100--Sobic006G275500 Sobic006G094100--Sobic001G140700 Sobic009G109300 Sobic009G109300 Sobic006G094100--Sobic009G109300 Sobic004G330600 Sobic004G330600 Sobic006G094100--Sobic004G330600 Sobic009G188900 Sobic009G188900 Sobic006G094100--Sobic009G188900 Sobic002G230800 Sobic002G230800 Sobic006G094100--Sobic002G230800 Sobic006G094100--Sobic010G250400 Sobic006G196600 Sobic006G196600 Sobic006G094100--Sobic006G196600 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic001G369800 Sobic001G369800 Sobic003G283600--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000 Sobic006G272500 Sobic006G272500 Sobic009G124800--Sobic006G272500 Sobic002G293700 Sobic002G293700 Sobic009G124800--Sobic002G293700 Sobic001G074100 Sobic001G074100 Sobic009G124800--Sobic001G074100 Sobic009G124800--Sobic001G296100 Sobic001G381100 Sobic001G381100 Sobic009G124800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic009G124800--Sobic006G241800 Sobic009G124800--Sobic010G211800 Sobic002G370400 Sobic002G370400 Sobic009G124800--Sobic002G370400 Sobic004G115700 Sobic004G115700 Sobic009G124800--Sobic004G115700 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic001G296800--Sobic002G370400 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic001G289900 Sobic001G289900 Sobic004G331200--Sobic001G289900 Sobic004G331200--Sobic010G105400 Sobic001G078600 Sobic001G078600 Sobic004G331200--Sobic001G078600 Sobic001G528600 Sobic001G528600 Sobic004G331200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic004G331200--Sobic006G191700 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic001G255600 Sobic001G255600 Sobic004G331200--Sobic001G255600 Sobic004G331200--Sobic008G096200
Octagon: transcription factors


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