Gene annotation
Transcriptome id Sobic.004G309800.1,Sobic.004G309800.2
Synonym Sb04g034210
Functional annotation remorin C-terminal domain containing protein, putative, expressed
UniProt C5XSV6 , A0A194YSF7
Pfam PF03763
Panther DB PTHR31471:SF2 PTHR31471
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G45207 : Remorin family protein
RAP-DB (Rice) LOC_Os02g52810.2,LOC_Os02g52810.1 : remorin C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a022225 , Zm00025a033093
Brachypodium KQK01742 , KQK01743
Barley HORVU6Hr1G080620.10 , HORVU6Hr1G080620.11 , HORVU6Hr1G080620.8 , HORVU6Hr1G080620.9 , HORVU6Hr1G080620.6 , HORVU6Hr1G080620.7 , HORVU6Hr1G080620.4 , HORVU6Hr1G080620.5 , HORVU6Hr1G080620.1 , HORVU6Hr1G080620.2 , HORVU6Hr1G080620.3
Wheat TraesCS6A02G333200 , TraesCS6B02G363600 , TraesCS6B02G363600 , TraesCS6D02G312000 , TraesCS6D02G312000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G309800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G207400 expressed protein -
2 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
3 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
4 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
5 Sobic.003G283600 HVA22, putative, expressed -
6 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
7 Sobic.001G404700 protein kinase, putative, expressed -
8 Sobic.001G231200 expressed protein -
9 Sobic.004G331200 expressed protein -
10 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
12 Sobic.006G067700 "protein kinase (like ACGVIII kinase called KIPK, a KCBP-interacting protein kinase)"(PubMedID : 28676627)@AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.003G277900 "D61(Ortholog in rice:Morinaka et al., 2006(PubMedID : 31659871)@systemin receptor SR160 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
14 Sobic.002G370400 expressed protein -
15 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
17 Sobic.008G083500 expressed protein -
18 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
20 Sobic.006G112850 - -


Gene co-expression network
sample Sobic004G309800 Sobic004G309800 Sobic006G207400 Sobic006G207400 Sobic004G309800--Sobic006G207400 Sobic003G230000 Sobic003G230000 Sobic004G309800--Sobic003G230000 Sobic001G113800 Sobic001G113800 Sobic004G309800--Sobic001G113800 Sobic007G094400 Sobic007G094400 Sobic004G309800--Sobic007G094400 Sobic003G283600 Sobic003G283600 Sobic004G309800--Sobic003G283600 Sobic001G290500 Sobic001G290500 Sobic004G309800--Sobic001G290500 Sobic001G404700 Sobic001G404700 Sobic004G309800--Sobic001G404700 Sobic001G231200 Sobic001G231200 Sobic004G309800--Sobic001G231200 Sobic004G331200 Sobic004G331200 Sobic004G309800--Sobic004G331200 Sobic006G207400--Sobic004G309800 Sobic006G207400--Sobic001G231200 Sobic008G096200 Sobic008G096200 Sobic006G207400--Sobic008G096200 Sobic006G207400--Sobic007G094400 Sobic001G261549 Sobic001G261549 Sobic006G207400--Sobic001G261549 Sobic006G207400--Sobic003G230000 Sobic001G487200 Sobic001G487200 Sobic006G207400--Sobic001G487200 Sobic001G108400 Sobic001G108400 Sobic006G207400--Sobic001G108400 Sobic007G166800 Sobic007G166800 Sobic006G207400--Sobic007G166800 Sobic002G227900 Sobic002G227900 Sobic003G230000--Sobic002G227900 Sobic003G307200 Sobic003G307200 Sobic003G230000--Sobic003G307200 Sobic001G493900 Sobic001G493900 Sobic003G230000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic003G230000--Sobic004G267600 Sobic002G394500 Sobic002G394500 Sobic003G230000--Sobic002G394500 Sobic002G360500 Sobic002G360500 Sobic003G230000--Sobic002G360500 Sobic001G199400 Sobic001G199400 Sobic003G230000--Sobic001G199400 Sobic006G219500 Sobic006G219500 Sobic003G230000--Sobic006G219500 Sobic003G230000--Sobic001G231200 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G113800--Sobic001G231200 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic002G370400 Sobic002G370400 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic006G272500 Sobic006G272500 Sobic001G113800--Sobic006G272500 Sobic010G277300 Sobic010G277300 Sobic007G094400--Sobic010G277300 Sobic001G107200 Sobic001G107200 Sobic007G094400--Sobic001G107200 Sobic006G191700 Sobic006G191700 Sobic007G094400--Sobic006G191700 Sobic004G286700 Sobic004G286700 Sobic007G094400--Sobic004G286700 Sobic007G094400--Sobic008G096200 Sobic007G094400--Sobic001G487200 Sobic001G528600 Sobic001G528600 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic007G094400--Sobic006G207400 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic001G369800 Sobic001G369800 Sobic003G283600--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000 Sobic009G077300 Sobic009G077300 Sobic001G290500--Sobic009G077300 Sobic006G094100 Sobic006G094100 Sobic001G290500--Sobic006G094100 Sobic006G281900 Sobic006G281900 Sobic001G290500--Sobic006G281900 Sobic001G290500--Sobic003G283600 Sobic006G275500 Sobic006G275500 Sobic001G290500--Sobic006G275500 Sobic001G054700 Sobic001G054700 Sobic001G290500--Sobic001G054700 Sobic001G290500--Sobic001G296100 Sobic009G188900 Sobic009G188900 Sobic001G290500--Sobic009G188900 Sobic009G000600 Sobic009G000600 Sobic001G290500--Sobic009G000600 Sobic006G189200 Sobic006G189200 Sobic001G404700--Sobic006G189200 Sobic001G404700--Sobic001G108400 Sobic003G412800 Sobic003G412800 Sobic001G404700--Sobic003G412800 Sobic010G079100 Sobic010G079100 Sobic001G404700--Sobic010G079100 Sobic004G208100 Sobic004G208100 Sobic001G404700--Sobic004G208100 Sobic001G404700--Sobic004G309800 Sobic001G404700--Sobic003G230000 Sobic002G151400 Sobic002G151400 Sobic001G404700--Sobic002G151400 Sobic002G230800 Sobic002G230800 Sobic001G404700--Sobic002G230800 Sobic001G231200--Sobic008G096200 Sobic001G231200--Sobic001G487200 Sobic001G231200--Sobic002G370400 Sobic010G211800 Sobic010G211800 Sobic001G231200--Sobic010G211800 Sobic010G105400 Sobic010G105400 Sobic001G231200--Sobic010G105400 Sobic010G129700 Sobic010G129700 Sobic001G231200--Sobic010G129700 Sobic003G013000 Sobic003G013000 Sobic001G231200--Sobic003G013000 Sobic003G444100 Sobic003G444100 Sobic001G231200--Sobic003G444100 Sobic001G231200--Sobic002G394500 Sobic001G289900 Sobic001G289900 Sobic004G331200--Sobic001G289900 Sobic004G331200--Sobic010G105400 Sobic001G078600 Sobic001G078600 Sobic004G331200--Sobic001G078600 Sobic004G331200--Sobic001G528600 Sobic004G331200--Sobic006G191700 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic001G255600 Sobic001G255600 Sobic004G331200--Sobic001G255600 Sobic004G331200--Sobic008G096200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.