Gene annotation
Transcriptome id Sobic.006G112850.1
Synonym -
Functional annotation -
UniProt A0A1Z5RDD7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G309800 remorin C-terminal domain containing protein, putative, expressed -
2 Sobic.003G283600 HVA22, putative, expressed -
3 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
4 Sobic.004G152200 glycosyltransferase, putative, expressed -
5 Sobic.010G277300 "BRD2(Ortholog in rice:Hong et al., 2005)"(PubMedID : 31659939)@FAD-linked oxidoreductase protein, putative, expressed K09828: DHCR24, Delta24-sterol reductase
6 Sobic.003G131100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
7 Sobic.004G004600 IQ calmodulin-binding motif family protein, putative, expressed -
8 Sobic.008G100700 SSXT protein, putative, expressed -
9 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
10 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
11 Sobic.010G144900 fiber protein Fb34, putative, expressed -
12 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
13 Sobic.010G065800 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
14 Sobic.004G047500 down-regulated TF in developmental senescence(PubMedID : 27586543)@whirly transcription factor domain containing protein, expressed -
15 Sobic.002G318600 RNA recognition motif containing protein, putative, expressed -
16 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
17 Sobic.005G021900 expressed protein -
18 Sobic.001G040300 expressed protein -
19 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
20 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -


Gene co-expression network
sample Sobic006G112850 Sobic006G112850 Sobic004G309800 Sobic004G309800 Sobic006G112850--Sobic004G309800 Sobic003G283600 Sobic003G283600 Sobic006G112850--Sobic003G283600 Sobic001G468500 Sobic001G468500 Sobic006G112850--Sobic001G468500 Sobic004G152200 Sobic004G152200 Sobic006G112850--Sobic004G152200 Sobic010G277300 Sobic010G277300 Sobic006G112850--Sobic010G277300 Sobic003G131100 Sobic003G131100 Sobic006G112850--Sobic003G131100 Sobic004G004600 Sobic004G004600 Sobic006G112850--Sobic004G004600 Sobic008G100700 Sobic008G100700 Sobic006G112850--Sobic008G100700 Sobic007G094400 Sobic007G094400 Sobic006G112850--Sobic007G094400 Sobic006G207400 Sobic006G207400 Sobic004G309800--Sobic006G207400 Sobic003G230000 Sobic003G230000 Sobic004G309800--Sobic003G230000 Sobic001G113800 Sobic001G113800 Sobic004G309800--Sobic001G113800 Sobic004G309800--Sobic007G094400 Sobic004G309800--Sobic003G283600 Sobic001G290500 Sobic001G290500 Sobic004G309800--Sobic001G290500 Sobic001G404700 Sobic001G404700 Sobic004G309800--Sobic001G404700 Sobic001G231200 Sobic001G231200 Sobic004G309800--Sobic001G231200 Sobic004G331200 Sobic004G331200 Sobic004G309800--Sobic004G331200 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic001G369800 Sobic001G369800 Sobic003G283600--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic001G468500--Sobic004G331200 Sobic001G528600 Sobic001G528600 Sobic004G152200--Sobic001G528600 Sobic001G242800 Sobic001G242800 Sobic004G152200--Sobic001G242800 Sobic002G393200 Sobic002G393200 Sobic004G152200--Sobic002G393200 Sobic002G319200 Sobic002G319200 Sobic004G152200--Sobic002G319200 Sobic007G113300 Sobic007G113300 Sobic004G152200--Sobic007G113300 Sobic002G034301 Sobic002G034301 Sobic004G152200--Sobic002G034301 Sobic004G152200--Sobic004G286700 Sobic009G206500 Sobic009G206500 Sobic004G152200--Sobic009G206500 Sobic004G119700 Sobic004G119700 Sobic004G152200--Sobic004G119700 Sobic010G277300--Sobic007G094400 Sobic010G277300--Sobic001G468500 Sobic007G225400 Sobic007G225400 Sobic010G277300--Sobic007G225400 Sobic002G286700 Sobic002G286700 Sobic010G277300--Sobic002G286700 Sobic005G047100 Sobic005G047100 Sobic010G277300--Sobic005G047100 Sobic004G170900 Sobic004G170900 Sobic010G277300--Sobic004G170900 Sobic010G277300--Sobic004G286700 Sobic009G242501 Sobic009G242501 Sobic010G277300--Sobic009G242501 Sobic002G146601 Sobic002G146601 Sobic010G277300--Sobic002G146601 Sobic003G131100--Sobic003G283600 Sobic008G044600 Sobic008G044600 Sobic003G131100--Sobic008G044600 Sobic003G131100--Sobic001G369800 Sobic010G149600 Sobic010G149600 Sobic003G131100--Sobic010G149600 Sobic005G032600 Sobic005G032600 Sobic003G131100--Sobic005G032600 Sobic002G074000 Sobic002G074000 Sobic003G131100--Sobic002G074000 Sobic004G207000 Sobic004G207000 Sobic003G131100--Sobic004G207000 Sobic008G169400 Sobic008G169400 Sobic003G131100--Sobic008G169400 Sobic001G079900 Sobic001G079900 Sobic003G131100--Sobic001G079900 Sobic006G188800 Sobic006G188800 Sobic004G004600--Sobic006G188800 Sobic001G467200 Sobic001G467200 Sobic004G004600--Sobic001G467200 Sobic001G143600 Sobic001G143600 Sobic004G004600--Sobic001G143600 Sobic008G015200 Sobic008G015200 Sobic004G004600--Sobic008G015200 Sobic005G021900 Sobic005G021900 Sobic004G004600--Sobic005G021900 Sobic001G108400 Sobic001G108400 Sobic004G004600--Sobic001G108400 Sobic003G311500 Sobic003G311500 Sobic004G004600--Sobic003G311500 Sobic002G002100 Sobic002G002100 Sobic004G004600--Sobic002G002100 Sobic004G004600--Sobic004G309800 Sobic008G100700--Sobic007G113300 Sobic004G082700 Sobic004G082700 Sobic008G100700--Sobic004G082700 Sobic002G218600 Sobic002G218600 Sobic008G100700--Sobic002G218600 Sobic001G532800 Sobic001G532800 Sobic008G100700--Sobic001G532800 Sobic002G303800 Sobic002G303800 Sobic008G100700--Sobic002G303800 Sobic001G397000 Sobic001G397000 Sobic008G100700--Sobic001G397000 Sobic010G191000 Sobic010G191000 Sobic008G100700--Sobic010G191000 Sobic007G218100 Sobic007G218100 Sobic008G100700--Sobic007G218100 Sobic003G179500 Sobic003G179500 Sobic008G100700--Sobic003G179500 Sobic007G094400--Sobic010G277300 Sobic001G107200 Sobic001G107200 Sobic007G094400--Sobic001G107200 Sobic006G191700 Sobic006G191700 Sobic007G094400--Sobic006G191700 Sobic007G094400--Sobic004G286700 Sobic008G096200 Sobic008G096200 Sobic007G094400--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic007G094400--Sobic001G487200 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic007G094400--Sobic006G207400
Octagon: transcription factors


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