Gene annotation
Transcriptome id Sobic.007G094400.1
Synonym Sb07g009370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
fiber protein Fb34, putative, expressed
UniProt C5YJU6
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68220 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os08g16130.1 : fiber protein Fb34, putative, expressed
MaizeGDB (Corn) Zm00025a054567 , Zm00025a030881
Brachypodium KQJ95816
Barley HORVU7Hr1G002450.1 , HORVU1Hr1G013960.1
Wheat TraesCS4A02G470000 , TraesCS4A02G470000 , TraesCS7D02G019700 , TraesCS7D02G019700 , TraesCS7A02G022500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G277300 "BRD2(Ortholog in rice:Hong et al., 2005)"(PubMedID : 31659939)@FAD-linked oxidoreductase protein, putative, expressed K09828: DHCR24, Delta24-sterol reductase
2 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
3 Sobic.006G191700 expansin precursor, putative, expressed -
4 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
7 Sobic.001G528600 remorin family protein, putative, expressed -
8 Sobic.001G051300 BEE 1, putative, expressed -
9 Sobic.006G207400 expressed protein -
10 Sobic.004G309800 remorin C-terminal domain containing protein, putative, expressed -
11 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
12 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
13 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
14 Sobic.010G144900 fiber protein Fb34, putative, expressed -
15 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
16 Sobic.001G231200 expressed protein -
17 Sobic.003G017500 TTL1, putative, expressed -
18 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
19 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
20 Sobic.008G039800 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic007G094400 Sobic007G094400 Sobic010G277300 Sobic010G277300 Sobic007G094400--Sobic010G277300 Sobic001G107200 Sobic001G107200 Sobic007G094400--Sobic001G107200 Sobic006G191700 Sobic006G191700 Sobic007G094400--Sobic006G191700 Sobic004G286700 Sobic004G286700 Sobic007G094400--Sobic004G286700 Sobic008G096200 Sobic008G096200 Sobic007G094400--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic007G094400--Sobic001G487200 Sobic001G528600 Sobic001G528600 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic006G207400 Sobic006G207400 Sobic007G094400--Sobic006G207400 Sobic010G277300--Sobic007G094400 Sobic001G468500 Sobic001G468500 Sobic010G277300--Sobic001G468500 Sobic007G225400 Sobic007G225400 Sobic010G277300--Sobic007G225400 Sobic002G286700 Sobic002G286700 Sobic010G277300--Sobic002G286700 Sobic005G047100 Sobic005G047100 Sobic010G277300--Sobic005G047100 Sobic004G170900 Sobic004G170900 Sobic010G277300--Sobic004G170900 Sobic010G277300--Sobic004G286700 Sobic009G242501 Sobic009G242501 Sobic010G277300--Sobic009G242501 Sobic002G146601 Sobic002G146601 Sobic010G277300--Sobic002G146601 Sobic001G107200--Sobic001G528600 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic001G107200--Sobic005G047100 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic001G261549 Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic006G191700--Sobic001G107200 Sobic006G191700--Sobic006G278100 Sobic009G189200 Sobic009G189200 Sobic006G191700--Sobic009G189200 Sobic006G191700--Sobic001G528600 Sobic006G191700--Sobic007G094400 Sobic006G191700--Sobic008G096200 Sobic004G331200 Sobic004G331200 Sobic006G191700--Sobic004G331200 Sobic001G078600 Sobic001G078600 Sobic006G191700--Sobic001G078600 Sobic003G420100 Sobic003G420100 Sobic004G286700--Sobic003G420100 Sobic004G286700--Sobic001G468500 Sobic003G410600 Sobic003G410600 Sobic004G286700--Sobic003G410600 Sobic007G113300 Sobic007G113300 Sobic004G286700--Sobic007G113300 Sobic004G286700--Sobic007G094400 Sobic003G017500 Sobic003G017500 Sobic004G286700--Sobic003G017500 Sobic004G233700 Sobic004G233700 Sobic004G286700--Sobic004G233700 Sobic004G286700--Sobic009G242501 Sobic009G021700 Sobic009G021700 Sobic004G286700--Sobic009G021700 Sobic001G231200 Sobic001G231200 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic010G211800 Sobic010G211800 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic008G096200--Sobic001G261549 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G528600--Sobic001G078600 Sobic001G528600--Sobic001G107200 Sobic002G280700 Sobic002G280700 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic001G528600--Sobic004G331200 Sobic001G528600--Sobic005G047100 Sobic006G102900 Sobic006G102900 Sobic001G528600--Sobic006G102900 Sobic003G289800 Sobic003G289800 Sobic001G051300--Sobic003G289800 Sobic002G383100 Sobic002G383100 Sobic001G051300--Sobic002G383100 Sobic007G139500 Sobic007G139500 Sobic001G051300--Sobic007G139500 Sobic009G087000 Sobic009G087000 Sobic001G051300--Sobic009G087000 Sobic006G071628 Sobic006G071628 Sobic001G051300--Sobic006G071628 Sobic003G179500 Sobic003G179500 Sobic001G051300--Sobic003G179500 Sobic010G147700 Sobic010G147700 Sobic001G051300--Sobic010G147700 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000 Sobic004G309800 Sobic004G309800 Sobic006G207400--Sobic004G309800 Sobic006G207400--Sobic001G231200 Sobic006G207400--Sobic008G096200 Sobic006G207400--Sobic007G094400 Sobic006G207400--Sobic001G261549 Sobic003G230000 Sobic003G230000 Sobic006G207400--Sobic003G230000 Sobic006G207400--Sobic001G487200 Sobic001G108400 Sobic001G108400 Sobic006G207400--Sobic001G108400 Sobic007G166800 Sobic007G166800 Sobic006G207400--Sobic007G166800
Octagon: transcription factors


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