Gene annotation
Transcriptome id Sobic.006G275600.2,Sobic.006G275600.4,Sobic.006G275600.3
Synonym Sb06g033690
Functional annotation uncharacterized ACR, YggU family COG1872 containing protein, expressed
UniProt A0A1Z5RGI2
Pfam PF02594
Panther DB PTHR13420
NCBI CDD KOG3276; Uncharacterized conserved protein, contains YggU domain
KEGG Orthology K09131; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49170 : Protein of unknown function (DUF167)
RAP-DB (Rice) LOC_Os04g58970.1 : uncharacterized ACR, YggU family COG1872 containing protein, expressed
MaizeGDB (Corn) Zm00025a010491
Brachypodium KQJ85414
Barley HORVU2Hr1G124380.1
Wheat TraesCS2A02G577700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G110300 SAM domain containing protein, putative, expressed -
2 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
3 Sobic.003G189900 expressed protein -
4 Sobic.002G088700 domain of unknown function domain containing protein, expressed -
5 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
6 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
7 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
8 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
9 Sobic.003G417900 cullin-1, putative, expressed -
10 Sobic.008G073000 expressed protein -
11 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -
12 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
13 Sobic.003G043100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
14 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
15 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
16 Sobic.008G108500 histone deacetylase 6, putative, expressed -
17 Sobic.010G257400 expressed protein -
18 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
19 Sobic.010G209700 expressed protein -
20 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -


Gene co-expression network
sample Sobic006G275600 Sobic006G275600 Sobic006G110300 Sobic006G110300 Sobic006G275600--Sobic006G110300 Sobic001G390500 Sobic001G390500 Sobic006G275600--Sobic001G390500 Sobic003G189900 Sobic003G189900 Sobic006G275600--Sobic003G189900 Sobic002G088700 Sobic002G088700 Sobic006G275600--Sobic002G088700 Sobic002G276900 Sobic002G276900 Sobic006G275600--Sobic002G276900 Sobic001G281700 Sobic001G281700 Sobic006G275600--Sobic001G281700 Sobic006G099800 Sobic006G099800 Sobic006G275600--Sobic006G099800 Sobic009G083200 Sobic009G083200 Sobic006G275600--Sobic009G083200 Sobic003G417900 Sobic003G417900 Sobic006G275600--Sobic003G417900 Sobic005G000800 Sobic005G000800 Sobic006G110300--Sobic005G000800 Sobic001G507400 Sobic001G507400 Sobic006G110300--Sobic001G507400 Sobic010G211300 Sobic010G211300 Sobic006G110300--Sobic010G211300 Sobic002G272600 Sobic002G272600 Sobic006G110300--Sobic002G272600 Sobic004G013600 Sobic004G013600 Sobic006G110300--Sobic004G013600 Sobic003G038600 Sobic003G038600 Sobic006G110300--Sobic003G038600 Sobic006G261100 Sobic006G261100 Sobic006G110300--Sobic006G261100 Sobic001G376800 Sobic001G376800 Sobic006G110300--Sobic001G376800 Sobic008G001100 Sobic008G001100 Sobic006G110300--Sobic008G001100 Sobic001G083600 Sobic001G083600 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic010G055500 Sobic010G055500 Sobic001G390500--Sobic010G055500 Sobic007G111100 Sobic007G111100 Sobic001G390500--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic001G390500--Sobic004G263900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic010G071200 Sobic010G071200 Sobic001G390500--Sobic010G071200 Sobic002G084300 Sobic002G084300 Sobic001G390500--Sobic002G084300 Sobic003G189900--Sobic001G390500 Sobic001G309100 Sobic001G309100 Sobic003G189900--Sobic001G309100 Sobic008G108500 Sobic008G108500 Sobic003G189900--Sobic008G108500 Sobic007G038800 Sobic007G038800 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G311000 Sobic003G311000 Sobic003G189900--Sobic003G311000 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic003G189900--Sobic010G071200 Sobic002G088700--Sobic001G281700 Sobic004G083200 Sobic004G083200 Sobic002G088700--Sobic004G083200 Sobic001G206000 Sobic001G206000 Sobic002G088700--Sobic001G206000 Sobic002G088700--Sobic001G390500 Sobic004G077000 Sobic004G077000 Sobic002G088700--Sobic004G077000 Sobic004G152000 Sobic004G152000 Sobic002G088700--Sobic004G152000 Sobic002G088700--Sobic003G248500 Sobic007G115900 Sobic007G115900 Sobic002G088700--Sobic007G115900 Sobic003G024800 Sobic003G024800 Sobic002G088700--Sobic003G024800 Sobic002G276900--Sobic006G261100 Sobic002G276900--Sobic006G099800 Sobic009G100300 Sobic009G100300 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic009G034400 Sobic009G034400 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic010G253100 Sobic010G253100 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic001G281700--Sobic001G206000 Sobic001G281700--Sobic002G088700 Sobic001G149700 Sobic001G149700 Sobic001G281700--Sobic001G149700 Sobic001G281700--Sobic007G115900 Sobic001G281700--Sobic010G071200 Sobic001G281700--Sobic010G055500 Sobic006G257900 Sobic006G257900 Sobic001G281700--Sobic006G257900 Sobic009G032300 Sobic009G032300 Sobic001G281700--Sobic009G032300 Sobic006G254600 Sobic006G254600 Sobic001G281700--Sobic006G254600 Sobic006G099800--Sobic002G276900 Sobic006G099800--Sobic007G038800 Sobic001G148700 Sobic001G148700 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic003G434000 Sobic003G434000 Sobic006G099800--Sobic003G434000 Sobic007G192100 Sobic007G192100 Sobic006G099800--Sobic007G192100 Sobic006G099800--Sobic008G108500 Sobic003G031200 Sobic003G031200 Sobic006G099800--Sobic003G031200 Sobic004G028800 Sobic004G028800 Sobic006G099800--Sobic004G028800 Sobic006G225300 Sobic006G225300 Sobic009G083200--Sobic006G225300 Sobic010G193800 Sobic010G193800 Sobic009G083200--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic009G083200--Sobic004G226800 Sobic002G256300 Sobic002G256300 Sobic009G083200--Sobic002G256300 Sobic009G058500 Sobic009G058500 Sobic009G083200--Sobic009G058500 Sobic007G014900 Sobic007G014900 Sobic009G083200--Sobic007G014900 Sobic010G083700 Sobic010G083700 Sobic009G083200--Sobic010G083700 Sobic004G356900 Sobic004G356900 Sobic009G083200--Sobic004G356900 Sobic010G209000 Sobic010G209000 Sobic009G083200--Sobic010G209000 Sobic002G197100 Sobic002G197100 Sobic003G417900--Sobic002G197100 Sobic003G417900--Sobic001G390500 Sobic001G408700 Sobic001G408700 Sobic003G417900--Sobic001G408700 Sobic003G354100 Sobic003G354100 Sobic003G417900--Sobic003G354100 Sobic003G417900--Sobic004G013600 Sobic001G425000 Sobic001G425000 Sobic003G417900--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic003G417900--Sobic006G092800 Sobic003G417900--Sobic003G189900 Sobic008G073000 Sobic008G073000 Sobic003G417900--Sobic008G073000
Octagon: transcription factors


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