Gene annotation
Transcriptome id Sobic.010G257400.1
Synonym Sb10g029420
Functional annotation expressed protein
UniProt C5Z9C0
Pfam -
Panther DB PTHR21162 PTHR21162:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15351 : -
RAP-DB (Rice) LOC_Os07g30220.1 : expressed protein
MaizeGDB (Corn) Zm00025a041759
Brachypodium KQK16208 , KQK16209
Barley HORVU3Hr1G020840.4 , HORVU3Hr1G020840.3 , HORVU3Hr1G020840.2 , HORVU3Hr1G020840.1
Wheat TraesCS3D02G116700 , TraesCSU02G185900 , TraesCS2D02G077100 , TraesCS2A02G079800 , TraesCS3A02G114200 , TraesCS2A02G077400
Populus -


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cDNA sequences
Sobic.010G257400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G083600 26S proteasome non-ATPase regulatory subunit 10, putative, expressed K06694: 26S proteasome non-ATPase regulatory subunit 10
2 Sobic.001G390500 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
3 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
4 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
5 Sobic.001G056200 expressed protein -
6 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3
7 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
8 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
9 Sobic.003G189900 expressed protein -
10 Sobic.006G258900 expressed protein -
11 Sobic.009G083200 coiled-coil domain-containing protein 25, putative, expressed -
12 Sobic.003G417900 cullin-1, putative, expressed -
13 Sobic.001G429400 wibg, putative, expressed K14294: WIBG, partner of Y14 and mago
14 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
15 Sobic.006G002500 basic salivary proline-rich protein 2 precursor, putative, expressed -
16 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
17 Sobic.001G512900 heat shock protein DnaJ, putative, expressed K09537: DnaJ homolog subfamily C member 17
18 Sobic.003G437500 syntaxin 6, putative, expressed -
19 Sobic.004G186000 salt tolerant protein, putative, expressed -
20 Sobic.003G420700 expressed protein -


Gene co-expression network
sample Sobic010G257400 Sobic010G257400 Sobic001G083600 Sobic001G083600 Sobic010G257400--Sobic001G083600 Sobic001G390500 Sobic001G390500 Sobic010G257400--Sobic001G390500 Sobic002G084300 Sobic002G084300 Sobic010G257400--Sobic002G084300 Sobic001G038100 Sobic001G038100 Sobic010G257400--Sobic001G038100 Sobic001G056200 Sobic001G056200 Sobic010G257400--Sobic001G056200 Sobic007G111100 Sobic007G111100 Sobic010G257400--Sobic007G111100 Sobic004G263900 Sobic004G263900 Sobic010G257400--Sobic004G263900 Sobic009G036200 Sobic009G036200 Sobic010G257400--Sobic009G036200 Sobic003G189900 Sobic003G189900 Sobic010G257400--Sobic003G189900 Sobic001G083600--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G083600--Sobic010G071200 Sobic001G083600--Sobic004G263900 Sobic001G512900 Sobic001G512900 Sobic001G083600--Sobic001G512900 Sobic010G055500 Sobic010G055500 Sobic001G083600--Sobic010G055500 Sobic008G174300 Sobic008G174300 Sobic001G083600--Sobic008G174300 Sobic001G083600--Sobic002G084300 Sobic001G083600--Sobic001G056200 Sobic010G211300 Sobic010G211300 Sobic001G083600--Sobic010G211300 Sobic001G390500--Sobic001G083600 Sobic003G248500 Sobic003G248500 Sobic001G390500--Sobic003G248500 Sobic001G390500--Sobic010G055500 Sobic001G390500--Sobic007G111100 Sobic001G390500--Sobic004G263900 Sobic001G390500--Sobic003G189900 Sobic010G174800 Sobic010G174800 Sobic001G390500--Sobic010G174800 Sobic001G390500--Sobic010G071200 Sobic001G390500--Sobic002G084300 Sobic002G084300--Sobic001G056200 Sobic002G084300--Sobic004G263900 Sobic002G084300--Sobic008G174300 Sobic002G378200 Sobic002G378200 Sobic002G084300--Sobic002G378200 Sobic001G028400 Sobic001G028400 Sobic002G084300--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic002G084300--Sobic001G408700 Sobic002G084300--Sobic001G390500 Sobic003G081000 Sobic003G081000 Sobic002G084300--Sobic003G081000 Sobic009G198100 Sobic009G198100 Sobic002G084300--Sobic009G198100 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G309100 Sobic001G309100 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic007G117100 Sobic007G117100 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic001G056200--Sobic002G084300 Sobic001G056200--Sobic004G263900 Sobic001G056200--Sobic001G408700 Sobic004G013600 Sobic004G013600 Sobic001G056200--Sobic004G013600 Sobic001G056200--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic001G056200--Sobic003G437500 Sobic006G088100 Sobic006G088100 Sobic001G056200--Sobic006G088100 Sobic004G007300 Sobic004G007300 Sobic001G056200--Sobic004G007300 Sobic001G056200--Sobic008G174300 Sobic010G202600 Sobic010G202600 Sobic007G111100--Sobic010G202600 Sobic002G262700 Sobic002G262700 Sobic007G111100--Sobic002G262700 Sobic006G267300 Sobic006G267300 Sobic007G111100--Sobic006G267300 Sobic001G143500 Sobic001G143500 Sobic007G111100--Sobic001G143500 Sobic007G111100--Sobic001G390500 Sobic004G283000 Sobic004G283000 Sobic007G111100--Sobic004G283000 Sobic004G068500 Sobic004G068500 Sobic007G111100--Sobic004G068500 Sobic001G131800 Sobic001G131800 Sobic007G111100--Sobic001G131800 Sobic003G205501 Sobic003G205501 Sobic007G111100--Sobic003G205501 Sobic004G263900--Sobic010G055500 Sobic004G263900--Sobic010G071200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic004G263900--Sobic008G174300 Sobic007G063200 Sobic007G063200 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic004G263900--Sobic001G028400 Sobic004G263900--Sobic002G084300 Sobic009G036200--Sobic007G111100 Sobic001G395100 Sobic001G395100 Sobic009G036200--Sobic001G395100 Sobic009G258400 Sobic009G258400 Sobic009G036200--Sobic009G258400 Sobic003G212900 Sobic003G212900 Sobic009G036200--Sobic003G212900 Sobic009G036200--Sobic002G262700 Sobic006G121300 Sobic006G121300 Sobic009G036200--Sobic006G121300 Sobic004G346100 Sobic004G346100 Sobic009G036200--Sobic004G346100 Sobic001G042200 Sobic001G042200 Sobic009G036200--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic009G036200--Sobic004G309900 Sobic003G189900--Sobic001G390500 Sobic003G189900--Sobic001G309100 Sobic008G108500 Sobic008G108500 Sobic003G189900--Sobic008G108500 Sobic007G038800 Sobic007G038800 Sobic003G189900--Sobic007G038800 Sobic002G176400 Sobic002G176400 Sobic003G189900--Sobic002G176400 Sobic003G311000 Sobic003G311000 Sobic003G189900--Sobic003G311000 Sobic003G189900--Sobic001G083600 Sobic006G002500 Sobic006G002500 Sobic003G189900--Sobic006G002500 Sobic003G189900--Sobic010G071200
Octagon: transcription factors


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