Gene annotation
Transcriptome id Sobic.001G497900.2
Synonym Sb01g046510
Functional annotation XS domain containing protein, expressed
UniProt A0A1Z5SBR7
Pfam PF03468
Panther DB PTHR21596 PTHR21596:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22430 : -
RAP-DB (Rice) LOC_Os03g06340.1 : XS domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053447 , Zm00025a000739 , Zm00025a000738
Brachypodium KQK23549 , PNT78157 , KQK23547 , KQK23548
Barley HORVU4Hr1G073060.2 , HORVU4Hr1G073060.3 , HORVU4Hr1G073060.1
Wheat TraesCS4A02G030900
Populus -


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cDNA sequences
Sobic.001G497900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034600 zinc ion binding protein, putative, expressed -
2 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
3 Sobic.009G198100 expressed protein -
4 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
5 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
6 Sobic.007G091600 proline rich protein 3, putative, expressed -
7 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
8 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
9 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
10 Sobic.010G018700 H-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
11 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
12 Sobic.002G045400 MBTB13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.007G205000 zinc finger family protein, putative, expressed -
14 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
15 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.004G186000 salt tolerant protein, putative, expressed -
17 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
18 Sobic.006G248500 expressed protein -
19 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
20 Sobic.001G507400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4


Gene co-expression network
sample Sobic001G497900 Sobic001G497900 Sobic002G034600 Sobic002G034600 Sobic001G497900--Sobic002G034600 Sobic003G355000 Sobic003G355000 Sobic001G497900--Sobic003G355000 Sobic009G198100 Sobic009G198100 Sobic001G497900--Sobic009G198100 Sobic001G473600 Sobic001G473600 Sobic001G497900--Sobic001G473600 Sobic006G121300 Sobic006G121300 Sobic001G497900--Sobic006G121300 Sobic007G091600 Sobic007G091600 Sobic001G497900--Sobic007G091600 Sobic001G356600 Sobic001G356600 Sobic001G497900--Sobic001G356600 Sobic010G095700 Sobic010G095700 Sobic001G497900--Sobic010G095700 Sobic001G395100 Sobic001G395100 Sobic001G497900--Sobic001G395100 Sobic002G034600--Sobic009G198100 Sobic007G119200 Sobic007G119200 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic002G034600--Sobic001G473600 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic003G355000--Sobic009G198100 Sobic003G355000--Sobic002G034600 Sobic002G045400 Sobic002G045400 Sobic003G355000--Sobic002G045400 Sobic003G433500 Sobic003G433500 Sobic003G355000--Sobic003G433500 Sobic008G174300 Sobic008G174300 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic003G355000--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic003G355000--Sobic010G033400 Sobic003G355000--Sobic001G497900 Sobic009G198100--Sobic007G118200 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic009G198100--Sobic003G355000 Sobic009G198100--Sobic003G081000 Sobic009G198100--Sobic008G174300 Sobic001G131800 Sobic001G131800 Sobic009G198100--Sobic001G131800 Sobic003G359300 Sobic003G359300 Sobic009G198100--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic009G198100--Sobic007G205000 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic006G121300--Sobic001G395100 Sobic006G121300--Sobic002G034600 Sobic001G216100 Sobic001G216100 Sobic006G121300--Sobic001G216100 Sobic010G028300 Sobic010G028300 Sobic006G121300--Sobic010G028300 Sobic007G056500 Sobic007G056500 Sobic006G121300--Sobic007G056500 Sobic006G121300--Sobic001G473600 Sobic008G179700 Sobic008G179700 Sobic006G121300--Sobic008G179700 Sobic003G401100 Sobic003G401100 Sobic006G121300--Sobic003G401100 Sobic005G160400 Sobic005G160400 Sobic006G121300--Sobic005G160400 Sobic006G118700 Sobic006G118700 Sobic007G091600--Sobic006G118700 Sobic007G191700 Sobic007G191700 Sobic007G091600--Sobic007G191700 Sobic007G091600--Sobic002G264200 Sobic004G084300 Sobic004G084300 Sobic007G091600--Sobic004G084300 Sobic005G021500 Sobic005G021500 Sobic007G091600--Sobic005G021500 Sobic007G091600--Sobic010G236400 Sobic009G177500 Sobic009G177500 Sobic007G091600--Sobic009G177500 Sobic004G129300 Sobic004G129300 Sobic007G091600--Sobic004G129300 Sobic003G394300 Sobic003G394300 Sobic007G091600--Sobic003G394300 Sobic004G066200 Sobic004G066200 Sobic001G356600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic001G356600--Sobic003G248200 Sobic001G356600--Sobic002G034600 Sobic001G512700 Sobic001G512700 Sobic001G356600--Sobic001G512700 Sobic009G228700 Sobic009G228700 Sobic001G356600--Sobic009G228700 Sobic009G179700 Sobic009G179700 Sobic001G356600--Sobic009G179700 Sobic010G018700 Sobic010G018700 Sobic001G356600--Sobic010G018700 Sobic001G356600--Sobic008G179700 Sobic004G274200 Sobic004G274200 Sobic001G356600--Sobic004G274200 Sobic010G095700--Sobic007G056500 Sobic010G095700--Sobic001G473600 Sobic006G261100 Sobic006G261100 Sobic010G095700--Sobic006G261100 Sobic001G390500 Sobic001G390500 Sobic010G095700--Sobic001G390500 Sobic010G095700--Sobic002G034600 Sobic010G095700--Sobic001G497900 Sobic007G111100 Sobic007G111100 Sobic010G095700--Sobic007G111100 Sobic010G095700--Sobic003G355000 Sobic001G469800 Sobic001G469800 Sobic010G095700--Sobic001G469800 Sobic001G395100--Sobic006G121300 Sobic001G395100--Sobic002G034600 Sobic001G395100--Sobic007G191700 Sobic001G395100--Sobic001G473600 Sobic001G395100--Sobic001G469800 Sobic007G027700 Sobic007G027700 Sobic001G395100--Sobic007G027700 Sobic001G395100--Sobic007G056500 Sobic006G248500 Sobic006G248500 Sobic001G395100--Sobic006G248500 Sobic001G042200 Sobic001G042200 Sobic001G395100--Sobic001G042200
Octagon: transcription factors


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