Gene annotation
Transcriptome id Sobic.010G180400.1
Synonym FATB, Sb10g023190
Functional annotation Fatty acyl-ACP thioesterases B FATB (At) (PubMedID : 27208977)
myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed
UniProt C5Z5J2
Pfam PF12590 PF01643
Panther DB PTHR31727 PTHR31727:SF3
NCBI CDD -
KEGG Orthology K10781; fatty acyl-ACP thioesterase B
Gene Ontology GO:0016790; thiolester hydrolase activity GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G08510 : fatty acyl-ACP thioesterases B
RAP-DB (Rice) LOC_Os06g39520.2 : myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051240 , Zm00025a047533 , Zm00025a042259
Brachypodium KQK17823
Barley HORVU7Hr1G084830.8 , HORVU7Hr1G084830.9 , HORVU7Hr1G084830.4 , HORVU7Hr1G084830.5 , HORVU7Hr1G084830.6 , HORVU7Hr1G084830.7 , HORVU7Hr1G084830.1 , HORVU7Hr1G084830.2 , HORVU7Hr1G084830.3 , HORVU7Hr1G084830.12 , HORVU7Hr1G084830.10 , HORVU7Hr1G084830.11
Wheat TraesCS7B02G255800 , TraesCS7B02G255800 , TraesCS7A02G371900 , TraesCS7A02G371900 , TraesCS7D02G351000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
2 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
3 Sobic.009G234300 CGMC_MAPKCMGC_2.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
4 Sobic.008G051900 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
5 Sobic.005G133900 TPR repeat region family protein, expressed -
6 Sobic.002G306900 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
7 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
8 Sobic.001G307900 LYR motif containing protein, putative, expressed K18167: succinate dehydrogenase assembly factor 1
9 Sobic.007G161200 expressed protein -
10 Sobic.001G222600 cyanate hydratase, putative, expressed K01725: cyanate lyase
11 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
12 Sobic.005G055000 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
13 Sobic.010G172500 ATP synthase, putative, expressed K02147: ATPeV1B, V-type H+-transporting ATPase subunit B
14 Sobic.010G050900 harpin-induced protein, putative, expressed -
15 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
16 Sobic.001G173500 - -
17 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
18 Sobic.002G055100 expressed protein -
19 Sobic.003G203500 "cinnamoyl-CoA reductase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
20 Sobic.006G257001 - -


Gene co-expression network
sample Sobic010G180400 Sobic010G180400 Sobic003G244200 Sobic003G244200 Sobic010G180400--Sobic003G244200 Sobic010G024100 Sobic010G024100 Sobic010G180400--Sobic010G024100 Sobic009G234300 Sobic009G234300 Sobic010G180400--Sobic009G234300 Sobic008G051900 Sobic008G051900 Sobic010G180400--Sobic008G051900 Sobic005G133900 Sobic005G133900 Sobic010G180400--Sobic005G133900 Sobic002G306900 Sobic002G306900 Sobic010G180400--Sobic002G306900 Sobic003G216500 Sobic003G216500 Sobic010G180400--Sobic003G216500 Sobic001G307900 Sobic001G307900 Sobic010G180400--Sobic001G307900 Sobic007G161200 Sobic007G161200 Sobic010G180400--Sobic007G161200 Sobic006G002201 Sobic006G002201 Sobic003G244200--Sobic006G002201 Sobic009G093200 Sobic009G093200 Sobic003G244200--Sobic009G093200 Sobic003G244200--Sobic005G133900 Sobic003G244200--Sobic007G161200 Sobic003G244200--Sobic003G216500 Sobic002G363100 Sobic002G363100 Sobic003G244200--Sobic002G363100 Sobic004G099900 Sobic004G099900 Sobic003G244200--Sobic004G099900 Sobic003G244200--Sobic010G180400 Sobic004G082900 Sobic004G082900 Sobic003G244200--Sobic004G082900 Sobic002G262000 Sobic002G262000 Sobic010G024100--Sobic002G262000 Sobic010G156000 Sobic010G156000 Sobic010G024100--Sobic010G156000 Sobic009G178200 Sobic009G178200 Sobic010G024100--Sobic009G178200 Sobic001G412100 Sobic001G412100 Sobic010G024100--Sobic001G412100 Sobic010G265300 Sobic010G265300 Sobic010G024100--Sobic010G265300 Sobic002G332900 Sobic002G332900 Sobic010G024100--Sobic002G332900 Sobic009G243100 Sobic009G243100 Sobic010G024100--Sobic009G243100 Sobic001G447900 Sobic001G447900 Sobic010G024100--Sobic001G447900 Sobic010G108900 Sobic010G108900 Sobic010G024100--Sobic010G108900 Sobic002G073800 Sobic002G073800 Sobic009G234300--Sobic002G073800 Sobic009G234300--Sobic002G363100 Sobic009G234300--Sobic003G244200 Sobic009G234300--Sobic003G216500 Sobic001G357300 Sobic001G357300 Sobic009G234300--Sobic001G357300 Sobic004G130100 Sobic004G130100 Sobic009G234300--Sobic004G130100 Sobic009G234300--Sobic010G180400 Sobic007G226100 Sobic007G226100 Sobic009G234300--Sobic007G226100 Sobic001G040800 Sobic001G040800 Sobic009G234300--Sobic001G040800 Sobic010G018400 Sobic010G018400 Sobic008G051900--Sobic010G018400 Sobic004G037700 Sobic004G037700 Sobic008G051900--Sobic004G037700 Sobic001G112400 Sobic001G112400 Sobic008G051900--Sobic001G112400 Sobic008G051900--Sobic002G073800 Sobic004G202100 Sobic004G202100 Sobic008G051900--Sobic004G202100 Sobic002G260200 Sobic002G260200 Sobic008G051900--Sobic002G260200 Sobic002G309500 Sobic002G309500 Sobic008G051900--Sobic002G309500 Sobic003G305100 Sobic003G305100 Sobic008G051900--Sobic003G305100 Sobic005G055000 Sobic005G055000 Sobic008G051900--Sobic005G055000 Sobic005G133900--Sobic002G363100 Sobic004G057200 Sobic004G057200 Sobic005G133900--Sobic004G057200 Sobic005G133900--Sobic003G244200 Sobic005G133900--Sobic001G357300 Sobic005G133900--Sobic009G093200 Sobic005G133900--Sobic003G216500 Sobic002G133800 Sobic002G133800 Sobic005G133900--Sobic002G133800 Sobic005G133900--Sobic006G002201 Sobic009G240900 Sobic009G240900 Sobic005G133900--Sobic009G240900 Sobic002G306900--Sobic001G040800 Sobic002G306900--Sobic002G363100 Sobic009G217900 Sobic009G217900 Sobic002G306900--Sobic009G217900 Sobic002G355300 Sobic002G355300 Sobic002G306900--Sobic002G355300 Sobic001G388600 Sobic001G388600 Sobic002G306900--Sobic001G388600 Sobic002G306900--Sobic001G357300 Sobic002G306900--Sobic004G130100 Sobic009G001400 Sobic009G001400 Sobic002G306900--Sobic009G001400 Sobic002G306900--Sobic003G216500 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic006G183000 Sobic006G183000 Sobic001G307900--Sobic006G183000 Sobic001G439600 Sobic001G439600 Sobic001G307900--Sobic001G439600 Sobic001G067900 Sobic001G067900 Sobic001G307900--Sobic001G067900 Sobic003G124800 Sobic003G124800 Sobic001G307900--Sobic003G124800 Sobic003G045400 Sobic003G045400 Sobic001G307900--Sobic003G045400 Sobic001G489700 Sobic001G489700 Sobic001G307900--Sobic001G489700 Sobic001G105100 Sobic001G105100 Sobic001G307900--Sobic001G105100 Sobic002G129000 Sobic002G129000 Sobic001G307900--Sobic002G129000 Sobic001G263000 Sobic001G263000 Sobic001G307900--Sobic001G263000 Sobic004G060100 Sobic004G060100 Sobic007G161200--Sobic004G060100 Sobic003G200800 Sobic003G200800 Sobic007G161200--Sobic003G200800 Sobic005G018800 Sobic005G018800 Sobic007G161200--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic008G021200 Sobic008G021200 Sobic007G161200--Sobic008G021200 Sobic001G115700 Sobic001G115700 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic004G283600 Sobic004G283600 Sobic007G161200--Sobic004G283600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.