Gene annotation
Transcriptome id Sobic.010G172500.3,Sobic.010G172500.2,Sobic.010G172500.1
Synonym Sb10g022500
Functional annotation ATP synthase, putative, expressed
UniProt H0I4G4 , A0A194YJS5 , A1E9S1
Pfam PF02874 PF00306 PF00006
Panther DB PTHR15184 PTHR15184:SF52
NCBI CDD -
KEGG Orthology K02147; ATPeV1B, V-type H+-transporting ATPase subunit B
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT4G38510 : ATPase, V1 complex, subunit B protein
RAP-DB (Rice) LOC_Os06g37180.1 : ATP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a051113 , Zm00025a042299
Brachypodium KQK17918 , KQJ94065 , KQJ94066
Barley HORVU6Hr1G039890.2 , HORVU6Hr1G039890.1 , HORVU6Hr1G039890.7 , HORVU6Hr1G039890.6 , HORVU6Hr1G039890.5 , HORVU3Hr1G067040.5 , HORVU3Hr1G067000.1 , HORVU3Hr1G067040.7 , HORVU7Hr1G087190.2 , HORVU7Hr1G087190.3 , HORVU7Hr1G087190.1 , HORVU7Hr1G087190.4 , HORVU7Hr1G087190.5 , HORVU3Hr1G067040.2 , HORVU3Hr1G067040.1 , HORVU6Hr1G039890.3 , HORVU6Hr1G039890.4
Wheat TraesCS7B02G265500 , TraesCS7B02G265500 , TraesCS6B02G218100 , TraesCS7D02G361000 , TraesCS7A02G362000 , TraesCS6D02G173400
Populus -


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cDNA sequences
Sobic.010G172500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G096300 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
2 Sobic.010G051300 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.004G185600 expressed protein -
4 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
5 Sobic.002G332750 - -
6 Sobic.006G052500 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
7 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
8 Sobic.001G489700 prenyltransferase, putative, expressed K02257: COX10, ctaB, heme o synthase
9 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
10 Sobic.008G041700 TLD family protein, putative, expressed -
11 Sobic.003G187200 phox domain-containing protein, putative, expressed -
12 Sobic.009G214900 expressed protein -
13 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
14 Sobic.008G104200 nitrilase, putative, expressed -
15 Sobic.001G383300 ABC transporter, ATP-binding protein, putative, expressed K05663: ATP-binding cassette, subfamily B, mitochondrial transporter ATM
16 Sobic.007G095500 expressed protein -
17 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
18 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
19 Sobic.009G126600 cyclin-dependent kinase D-1, putative, expressed K02202: cyclin-dependent kinase 7
20 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A


Gene co-expression network
sample Sobic010G172500 Sobic010G172500 Sobic001G096300 Sobic001G096300 Sobic010G172500--Sobic001G096300 Sobic010G051300 Sobic010G051300 Sobic010G172500--Sobic010G051300 Sobic004G185600 Sobic004G185600 Sobic010G172500--Sobic004G185600 Sobic009G219000 Sobic009G219000 Sobic010G172500--Sobic009G219000 Sobic002G332750 Sobic002G332750 Sobic010G172500--Sobic002G332750 Sobic006G052500 Sobic006G052500 Sobic010G172500--Sobic006G052500 Sobic009G245800 Sobic009G245800 Sobic010G172500--Sobic009G245800 Sobic001G489700 Sobic001G489700 Sobic010G172500--Sobic001G489700 Sobic006G202200 Sobic006G202200 Sobic010G172500--Sobic006G202200 Sobic003G196900 Sobic003G196900 Sobic001G096300--Sobic003G196900 Sobic001G096300--Sobic010G172500 Sobic006G280600 Sobic006G280600 Sobic001G096300--Sobic006G280600 Sobic001G263000 Sobic001G263000 Sobic001G096300--Sobic001G263000 Sobic007G171950 Sobic007G171950 Sobic001G096300--Sobic007G171950 Sobic001G307900 Sobic001G307900 Sobic001G096300--Sobic001G307900 Sobic001G067300 Sobic001G067300 Sobic001G096300--Sobic001G067300 Sobic001G464100 Sobic001G464100 Sobic001G096300--Sobic001G464100 Sobic007G095500 Sobic007G095500 Sobic001G096300--Sobic007G095500 Sobic002G116900 Sobic002G116900 Sobic010G051300--Sobic002G116900 Sobic008G104200 Sobic008G104200 Sobic010G051300--Sobic008G104200 Sobic005G168600 Sobic005G168600 Sobic010G051300--Sobic005G168600 Sobic010G051300--Sobic010G172500 Sobic001G394600 Sobic001G394600 Sobic010G051300--Sobic001G394600 Sobic004G296400 Sobic004G296400 Sobic010G051300--Sobic004G296400 Sobic006G217000 Sobic006G217000 Sobic010G051300--Sobic006G217000 Sobic008G032600 Sobic008G032600 Sobic010G051300--Sobic008G032600 Sobic003G233600 Sobic003G233600 Sobic010G051300--Sobic003G233600 Sobic010G249300 Sobic010G249300 Sobic004G185600--Sobic010G249300 Sobic001G201400 Sobic001G201400 Sobic004G185600--Sobic001G201400 Sobic010G146600 Sobic010G146600 Sobic004G185600--Sobic010G146600 Sobic001G281600 Sobic001G281600 Sobic004G185600--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic004G185600--Sobic009G050900 Sobic001G291100 Sobic001G291100 Sobic004G185600--Sobic001G291100 Sobic002G378200 Sobic002G378200 Sobic004G185600--Sobic002G378200 Sobic008G004400 Sobic008G004400 Sobic004G185600--Sobic008G004400 Sobic001G142100 Sobic001G142100 Sobic004G185600--Sobic001G142100 Sobic001G541100 Sobic001G541100 Sobic009G219000--Sobic001G541100 Sobic001G323000 Sobic001G323000 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic001G466700 Sobic001G466700 Sobic009G219000--Sobic001G466700 Sobic004G274400 Sobic004G274400 Sobic009G219000--Sobic004G274400 Sobic009G138100 Sobic009G138100 Sobic009G219000--Sobic009G138100 Sobic001G105500 Sobic001G105500 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200 Sobic007G217000 Sobic007G217000 Sobic002G332750--Sobic007G217000 Sobic001G222500 Sobic001G222500 Sobic002G332750--Sobic001G222500 Sobic008G047800 Sobic008G047800 Sobic002G332750--Sobic008G047800 Sobic005G013200 Sobic005G013200 Sobic002G332750--Sobic005G013200 Sobic002G332750--Sobic009G245800 Sobic009G126400 Sobic009G126400 Sobic002G332750--Sobic009G126400 Sobic001G512700 Sobic001G512700 Sobic002G332750--Sobic001G512700 Sobic004G341900 Sobic004G341900 Sobic002G332750--Sobic004G341900 Sobic002G340100 Sobic002G340100 Sobic002G332750--Sobic002G340100 Sobic002G310200 Sobic002G310200 Sobic006G052500--Sobic002G310200 Sobic006G052500--Sobic009G219000 Sobic009G042700 Sobic009G042700 Sobic006G052500--Sobic009G042700 Sobic002G067600 Sobic002G067600 Sobic006G052500--Sobic002G067600 Sobic007G203500 Sobic007G203500 Sobic006G052500--Sobic007G203500 Sobic006G052800 Sobic006G052800 Sobic006G052500--Sobic006G052800 Sobic010G053800 Sobic010G053800 Sobic006G052500--Sobic010G053800 Sobic007G134600 Sobic007G134600 Sobic006G052500--Sobic007G134600 Sobic010G056000 Sobic010G056000 Sobic006G052500--Sobic010G056000 Sobic009G245800--Sobic010G053800 Sobic003G404500 Sobic003G404500 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic003G443100 Sobic003G443100 Sobic009G245800--Sobic003G443100 Sobic008G165000 Sobic008G165000 Sobic001G489700--Sobic008G165000 Sobic001G489700--Sobic002G378200 Sobic001G047400 Sobic001G047400 Sobic001G489700--Sobic001G047400 Sobic001G489700--Sobic001G307900 Sobic004G010900 Sobic004G010900 Sobic001G489700--Sobic004G010900 Sobic009G257200 Sobic009G257200 Sobic001G489700--Sobic009G257200 Sobic006G250900 Sobic006G250900 Sobic001G489700--Sobic006G250900 Sobic002G040700 Sobic002G040700 Sobic001G489700--Sobic002G040700 Sobic002G281300 Sobic002G281300 Sobic001G489700--Sobic002G281300 Sobic003G008500 Sobic003G008500 Sobic006G202200--Sobic003G008500 Sobic004G345700 Sobic004G345700 Sobic006G202200--Sobic004G345700 Sobic006G082900 Sobic006G082900 Sobic006G202200--Sobic006G082900 Sobic009G229600 Sobic009G229600 Sobic006G202200--Sobic009G229600 Sobic001G518400 Sobic001G518400 Sobic006G202200--Sobic001G518400 Sobic009G126600 Sobic009G126600 Sobic006G202200--Sobic009G126600 Sobic003G401000 Sobic003G401000 Sobic006G202200--Sobic003G401000 Sobic009G214900 Sobic009G214900 Sobic006G202200--Sobic009G214900 Sobic008G149800 Sobic008G149800 Sobic006G202200--Sobic008G149800
Octagon: transcription factors


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