Gene annotation
Transcriptome id Sobic.002G332750.1
Synonym -
Functional annotation -
UniProt A0A1W0W6X5
Pfam PF00010 PF11698 PF03224
Panther DB PTHR10698
NCBI CDD KOG2759; Vacuolar H+-ATPase V1 sector, subunit H
KEGG Orthology -
Gene Ontology GO:0000221; vacuolar proton-transporting V-type ATPase, V1 domain


Orthologs (automatic annotation)
TAIR AT3G42050 : vacuolar ATP synthase subunit H family protein
RAP-DB (Rice) LOC_Os07g36470.1 : vacuolar ATP synthase subunit H, putative, expressed
MaizeGDB (Corn) Zm00025a048335 , Zm00025a014867 , Zm00025a014869
Brachypodium PNT74962 , KQK15840 , KQK15841
Barley HORVU2Hr1G042710.2 , HORVU2Hr1G042710.1
Wheat TraesCS2D02G218000 , TraesCS2A02G212200 , TraesCS2A02G212100 , TraesCS2D02G218100 , TraesCS2B02G237200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
2 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
3 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
4 Sobic.005G013200 BAH domain containing protein, expressed -
5 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
6 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
7 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
8 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
9 Sobic.002G340100 GTPase-activating protein, putative, expressed K12486: stromal membrane-associated protein
10 Sobic.001G114000 expressed protein -
11 Sobic.002G310200 expressed protein -
12 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
13 Sobic.007G118600 mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
14 Sobic.002G143500 sulfate transporter 4.1, chloroplast precursor, putative, expressed K18059: sulfate transporter 4
15 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
17 Sobic.001G166600 semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00145: N-acetyl-gamma-glutamyl-phosphate reductase
18 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
19 Sobic.005G045300 PX domain containing protein, putative, expressed K17925: sorting nexin-13
20 Sobic.010G129200 - -


Gene co-expression network
sample Sobic002G332750 Sobic002G332750 Sobic007G217000 Sobic007G217000 Sobic002G332750--Sobic007G217000 Sobic001G222500 Sobic001G222500 Sobic002G332750--Sobic001G222500 Sobic008G047800 Sobic008G047800 Sobic002G332750--Sobic008G047800 Sobic005G013200 Sobic005G013200 Sobic002G332750--Sobic005G013200 Sobic009G245800 Sobic009G245800 Sobic002G332750--Sobic009G245800 Sobic009G126400 Sobic009G126400 Sobic002G332750--Sobic009G126400 Sobic001G512700 Sobic001G512700 Sobic002G332750--Sobic001G512700 Sobic004G341900 Sobic004G341900 Sobic002G332750--Sobic004G341900 Sobic002G340100 Sobic002G340100 Sobic002G332750--Sobic002G340100 Sobic001G114000 Sobic001G114000 Sobic007G217000--Sobic001G114000 Sobic007G217000--Sobic008G047800 Sobic009G166300 Sobic009G166300 Sobic007G217000--Sobic009G166300 Sobic001G155000 Sobic001G155000 Sobic007G217000--Sobic001G155000 Sobic001G474600 Sobic001G474600 Sobic007G217000--Sobic001G474600 Sobic007G011300 Sobic007G011300 Sobic007G217000--Sobic007G011300 Sobic007G118600 Sobic007G118600 Sobic007G217000--Sobic007G118600 Sobic002G310200 Sobic002G310200 Sobic007G217000--Sobic002G310200 Sobic004G067700 Sobic004G067700 Sobic007G217000--Sobic004G067700 Sobic004G084300 Sobic004G084300 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G222500--Sobic001G155000 Sobic001G222500--Sobic002G310200 Sobic001G222500--Sobic009G126400 Sobic009G040600 Sobic009G040600 Sobic001G222500--Sobic009G040600 Sobic002G006900 Sobic002G006900 Sobic001G222500--Sobic002G006900 Sobic003G052200 Sobic003G052200 Sobic001G222500--Sobic003G052200 Sobic007G096000 Sobic007G096000 Sobic001G222500--Sobic007G096000 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic008G047800--Sobic007G011300 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic008G028700 Sobic008G028700 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic005G013200--Sobic004G084300 Sobic010G053800 Sobic010G053800 Sobic009G245800--Sobic010G053800 Sobic003G404500 Sobic003G404500 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic009G245800--Sobic008G047800 Sobic006G208500 Sobic006G208500 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic009G245800--Sobic002G310200 Sobic004G135400 Sobic004G135400 Sobic009G245800--Sobic004G135400 Sobic003G443100 Sobic003G443100 Sobic009G245800--Sobic003G443100 Sobic009G126400--Sobic003G052200 Sobic009G126400--Sobic009G040600 Sobic009G126400--Sobic008G047800 Sobic003G280800 Sobic003G280800 Sobic009G126400--Sobic003G280800 Sobic009G126400--Sobic001G222500 Sobic009G126400--Sobic008G162900 Sobic009G126400--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic009G126400--Sobic004G208900 Sobic009G126400--Sobic002G309600 Sobic001G512700--Sobic008G047800 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic008G067600 Sobic008G067600 Sobic001G512700--Sobic008G067600 Sobic001G214300 Sobic001G214300 Sobic004G341900--Sobic001G214300 Sobic003G029700 Sobic003G029700 Sobic004G341900--Sobic003G029700 Sobic004G341900--Sobic002G006900 Sobic010G013800 Sobic010G013800 Sobic004G341900--Sobic010G013800 Sobic003G176500 Sobic003G176500 Sobic004G341900--Sobic003G176500 Sobic009G191000 Sobic009G191000 Sobic004G341900--Sobic009G191000 Sobic009G026500 Sobic009G026500 Sobic004G341900--Sobic009G026500 Sobic008G188900 Sobic008G188900 Sobic004G341900--Sobic008G188900 Sobic006G048600 Sobic006G048600 Sobic004G341900--Sobic006G048600 Sobic001G292200 Sobic001G292200 Sobic002G340100--Sobic001G292200 Sobic001G071400 Sobic001G071400 Sobic002G340100--Sobic001G071400 Sobic006G245400 Sobic006G245400 Sobic002G340100--Sobic006G245400 Sobic002G315200 Sobic002G315200 Sobic002G340100--Sobic002G315200 Sobic009G135800 Sobic009G135800 Sobic002G340100--Sobic009G135800 Sobic002G340100--Sobic001G114000 Sobic002G340100--Sobic007G217000 Sobic004G052900 Sobic004G052900 Sobic002G340100--Sobic004G052900 Sobic002G340100--Sobic001G474600
Octagon: transcription factors


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