Gene annotation
Transcriptome id Sobic.001G482900.4,Sobic.001G482900.1,Sobic.001G482900.2,Sobic.001G482900.3
Synonym Sb01g045200
Functional annotation glycosyl transferase, group 1 domain containing protein, expressed
UniProt A0A1Z5SB63 , C5WVS9 , A0A1B6QQ44 , A0A1Z5SB31
Pfam PF13579 PF13692
Panther DB PTHR13036 PTHR13036:SF0
NCBI CDD KOG2941; Beta-1,4-mannosyltransferase
KEGG Orthology K03842; beta-1,4-mannosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT1G16570 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os03g08300.1,LOC_Os03g08300.2 : glycosyl transferase, group 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053285 , Zm00025a007140 , Zm00025a000921
Brachypodium KQK23312
Barley HORVU4Hr1G076910.2 , HORVU4Hr1G076910.20 , HORVU4Hr1G076910.21 , HORVU4Hr1G076910.22 , HORVU4Hr1G076910.23 , HORVU4Hr1G076910.24 , HORVU4Hr1G076910.25 , HORVU4Hr1G076910.7 , HORVU4Hr1G076910.19 , HORVU4Hr1G076910.18 , HORVU4Hr1G076910.15 , HORVU4Hr1G076910.14 , HORVU4Hr1G076910.17 , HORVU4Hr1G076910.16 , HORVU4Hr1G076910.11 , HORVU4Hr1G076910.10 , HORVU4Hr1G076910.13 , HORVU4Hr1G076910.12 , HORVU4Hr1G076910.9 , HORVU4Hr1G076910.8 , HORVU4Hr1G076910.3 , HORVU4Hr1G076910.6
Wheat TraesCS5B02G331200 , TraesCS5D02G336600 , TraesCS4D02G295700 , TraesCS4D02G295700 , TraesCS5B02G331200 , TraesCS4A02G008100 , TraesCS4A02G008100 , TraesCS4B02G296800 , TraesCS4B02G296800 , TraesCS4B02G296800 , TraesCS5A02G330800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
2 Sobic.002G371700 signal recognition particle 68 kDa protein, putative, expressed K03107: signal recognition particle subunit SRP68
3 Sobic.006G166200 Alg9-like mannosyltransferase protein, putative, expressed K03847: alpha-1,6-mannosyltransferase
4 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
5 Sobic.002G111600 expressed protein -
6 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
7 Sobic.010G176500 expressed protein -
8 Sobic.001G447300 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
9 Sobic.008G054600 splicing factor, putative, expressed -
10 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
11 Sobic.005G110409 - -
12 Sobic.001G008200 expressed protein K13211: GC-rich sequence DNA-binding factor
13 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
14 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
15 Sobic.007G132100 myrosinase precursor, putative, expressed -
16 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
17 Sobic.004G017400 expressed protein -
18 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
19 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase


Gene co-expression network
sample Sobic001G482900 Sobic001G482900 Sobic008G103300 Sobic008G103300 Sobic001G482900--Sobic008G103300 Sobic002G371700 Sobic002G371700 Sobic001G482900--Sobic002G371700 Sobic006G166200 Sobic006G166200 Sobic001G482900--Sobic006G166200 Sobic006G240100 Sobic006G240100 Sobic001G482900--Sobic006G240100 Sobic002G111600 Sobic002G111600 Sobic001G482900--Sobic002G111600 Sobic001G114500 Sobic001G114500 Sobic001G482900--Sobic001G114500 Sobic010G176500 Sobic010G176500 Sobic001G482900--Sobic010G176500 Sobic001G447300 Sobic001G447300 Sobic001G482900--Sobic001G447300 Sobic008G054600 Sobic008G054600 Sobic001G482900--Sobic008G054600 Sobic008G055900 Sobic008G055900 Sobic008G103300--Sobic008G055900 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic002G371700--Sobic008G103300 Sobic004G053500 Sobic004G053500 Sobic002G371700--Sobic004G053500 Sobic010G059500 Sobic010G059500 Sobic002G371700--Sobic010G059500 Sobic002G142900 Sobic002G142900 Sobic002G371700--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic002G371700--Sobic004G131300 Sobic002G401500 Sobic002G401500 Sobic002G371700--Sobic002G401500 Sobic005G110499 Sobic005G110499 Sobic002G371700--Sobic005G110499 Sobic001G087600 Sobic001G087600 Sobic002G371700--Sobic001G087600 Sobic003G363700 Sobic003G363700 Sobic002G371700--Sobic003G363700 Sobic005G133800 Sobic005G133800 Sobic006G166200--Sobic005G133800 Sobic006G166200--Sobic004G053500 Sobic008G124800 Sobic008G124800 Sobic006G166200--Sobic008G124800 Sobic003G405500 Sobic003G405500 Sobic006G166200--Sobic003G405500 Sobic006G224800 Sobic006G224800 Sobic006G166200--Sobic006G224800 Sobic006G166200--Sobic001G145400 Sobic006G166200--Sobic010G059500 Sobic002G235200 Sobic002G235200 Sobic006G166200--Sobic002G235200 Sobic009G201700 Sobic009G201700 Sobic006G166200--Sobic009G201700 Sobic009G044800 Sobic009G044800 Sobic006G240100--Sobic009G044800 Sobic003G416700 Sobic003G416700 Sobic006G240100--Sobic003G416700 Sobic002G154000 Sobic002G154000 Sobic006G240100--Sobic002G154000 Sobic007G132100 Sobic007G132100 Sobic006G240100--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G240100--Sobic007G218000 Sobic003G360400 Sobic003G360400 Sobic006G240100--Sobic003G360400 Sobic010G204400 Sobic010G204400 Sobic006G240100--Sobic010G204400 Sobic001G354600 Sobic001G354600 Sobic006G240100--Sobic001G354600 Sobic004G072100 Sobic004G072100 Sobic006G240100--Sobic004G072100 Sobic001G382600 Sobic001G382600 Sobic002G111600--Sobic001G382600 Sobic002G111600--Sobic007G132100 Sobic007G225100 Sobic007G225100 Sobic002G111600--Sobic007G225100 Sobic002G111600--Sobic008G103300 Sobic001G142100 Sobic001G142100 Sobic002G111600--Sobic001G142100 Sobic008G164600 Sobic008G164600 Sobic002G111600--Sobic008G164600 Sobic002G111600--Sobic006G240100 Sobic009G088000 Sobic009G088000 Sobic002G111600--Sobic009G088000 Sobic010G118000 Sobic010G118000 Sobic002G111600--Sobic010G118000 Sobic001G114500--Sobic003G132000 Sobic003G121300 Sobic003G121300 Sobic001G114500--Sobic003G121300 Sobic001G114500--Sobic008G103300 Sobic009G164000 Sobic009G164000 Sobic001G114500--Sobic009G164000 Sobic001G473600 Sobic001G473600 Sobic001G114500--Sobic001G473600 Sobic007G084100 Sobic007G084100 Sobic001G114500--Sobic007G084100 Sobic005G160400 Sobic005G160400 Sobic001G114500--Sobic005G160400 Sobic009G258400 Sobic009G258400 Sobic001G114500--Sobic009G258400 Sobic004G156800 Sobic004G156800 Sobic001G114500--Sobic004G156800 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic010G176500--Sobic008G103300 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic006G233300 Sobic006G233300 Sobic010G176500--Sobic006G233300 Sobic006G136400 Sobic006G136400 Sobic001G447300--Sobic006G136400 Sobic001G447300--Sobic008G055900 Sobic008G099800 Sobic008G099800 Sobic001G447300--Sobic008G099800 Sobic001G447300--Sobic006G166200 Sobic001G455800 Sobic001G455800 Sobic001G447300--Sobic001G455800 Sobic004G145000 Sobic004G145000 Sobic001G447300--Sobic004G145000 Sobic001G447300--Sobic002G371700 Sobic001G447300--Sobic004G053500 Sobic004G353000 Sobic004G353000 Sobic001G447300--Sobic004G353000 Sobic001G014300 Sobic001G014300 Sobic008G054600--Sobic001G014300 Sobic004G256500 Sobic004G256500 Sobic008G054600--Sobic004G256500 Sobic004G096400 Sobic004G096400 Sobic008G054600--Sobic004G096400 Sobic002G396500 Sobic002G396500 Sobic008G054600--Sobic002G396500 Sobic008G054600--Sobic003G405500 Sobic008G054600--Sobic006G224800 Sobic009G084900 Sobic009G084900 Sobic008G054600--Sobic009G084900 Sobic008G054600--Sobic006G166200 Sobic004G236800 Sobic004G236800 Sobic008G054600--Sobic004G236800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.