Gene annotation
Transcriptome id Sobic.003G238700.2,Sobic.003G238700.4,Sobic.003G238700.1,Sobic.003G238700.3
Synonym Sb03g029590
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6Q516 , A0A1W0VYP4 , C5XF72 , A0A1W0VYQ5
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF209
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G28600 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g46080.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a028238 , Zm00025a028239 , Zm00025a028240
Brachypodium -
Barley -
Wheat TraesCS3D02G236100 , TraesCS3D02G236000 , TraesCS3D02G236000 , TraesCS3B02G264900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G332800 GTPase-activating protein, putative, expressed -
2 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
3 Sobic.009G209300 starch synthase, putative, expressed -
4 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
5 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
6 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
7 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.004G028500 pyridoxal biosynthesis protein PDX2, putative, expressed K08681: pdxT, 5'-phosphate synthase pdxT subunit
9 Sobic.007G106800 nucleolar protein NOP5, putative, expressed -
10 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
11 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
12 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
13 Sobic.001G214300 expressed protein -
14 Sobic.009G034200 CBL-interacting protein kinase 1(PubMedID : 26320239)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
15 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
16 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
17 Sobic.005G159000 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
18 Sobic.003G429650 - -
19 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G065600 expressed protein -


Gene co-expression network
sample Sobic003G238700 Sobic003G238700 Sobic003G332800 Sobic003G332800 Sobic003G238700--Sobic003G332800 Sobic007G116200 Sobic007G116200 Sobic003G238700--Sobic007G116200 Sobic009G209300 Sobic009G209300 Sobic003G238700--Sobic009G209300 Sobic003G396200 Sobic003G396200 Sobic003G238700--Sobic003G396200 Sobic006G216800 Sobic006G216800 Sobic003G238700--Sobic006G216800 Sobic005G045000 Sobic005G045000 Sobic003G238700--Sobic005G045000 Sobic010G256700 Sobic010G256700 Sobic003G238700--Sobic010G256700 Sobic004G028500 Sobic004G028500 Sobic003G238700--Sobic004G028500 Sobic007G106800 Sobic007G106800 Sobic003G238700--Sobic007G106800 Sobic007G096600 Sobic007G096600 Sobic003G332800--Sobic007G096600 Sobic003G332800--Sobic006G216800 Sobic003G148000 Sobic003G148000 Sobic003G332800--Sobic003G148000 Sobic002G006900 Sobic002G006900 Sobic003G332800--Sobic002G006900 Sobic007G167500 Sobic007G167500 Sobic003G332800--Sobic007G167500 Sobic003G332800--Sobic009G209300 Sobic002G243900 Sobic002G243900 Sobic003G332800--Sobic002G243900 Sobic007G065400 Sobic007G065400 Sobic003G332800--Sobic007G065400 Sobic003G176500 Sobic003G176500 Sobic003G332800--Sobic003G176500 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic004G359800 Sobic004G359800 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic009G209300--Sobic003G332800 Sobic009G209300--Sobic006G216800 Sobic003G429650 Sobic003G429650 Sobic009G209300--Sobic003G429650 Sobic009G209300--Sobic006G182900 Sobic006G048500 Sobic006G048500 Sobic009G209300--Sobic006G048500 Sobic009G209300--Sobic007G116200 Sobic002G006600 Sobic002G006600 Sobic009G209300--Sobic002G006600 Sobic009G209300--Sobic003G148000 Sobic001G036050 Sobic001G036050 Sobic009G209300--Sobic001G036050 Sobic003G396200--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic003G396200--Sobic007G193700 Sobic001G159400 Sobic001G159400 Sobic003G396200--Sobic001G159400 Sobic003G396200--Sobic007G116200 Sobic006G131500 Sobic006G131500 Sobic003G396200--Sobic006G131500 Sobic002G127550 Sobic002G127550 Sobic003G396200--Sobic002G127550 Sobic003G396200--Sobic004G209600 Sobic001G375100 Sobic001G375100 Sobic003G396200--Sobic001G375100 Sobic003G396200--Sobic006G216800 Sobic002G133400 Sobic002G133400 Sobic006G216800--Sobic002G133400 Sobic006G216800--Sobic007G116200 Sobic002G309600 Sobic002G309600 Sobic006G216800--Sobic002G309600 Sobic006G216800--Sobic002G134200 Sobic006G216800--Sobic003G332800 Sobic005G112300 Sobic005G112300 Sobic006G216800--Sobic005G112300 Sobic006G216800--Sobic003G280800 Sobic006G216800--Sobic010G139000 Sobic010G277500 Sobic010G277500 Sobic006G216800--Sobic010G277500 Sobic003G313300 Sobic003G313300 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic001G468700 Sobic001G468700 Sobic005G045000--Sobic001G468700 Sobic003G017100 Sobic003G017100 Sobic005G045000--Sobic003G017100 Sobic005G045000--Sobic004G028500 Sobic003G191700 Sobic003G191700 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic008G151100 Sobic008G151100 Sobic005G045000--Sobic008G151100 Sobic008G168300 Sobic008G168300 Sobic005G045000--Sobic008G168300 Sobic010G256700--Sobic007G116200 Sobic010G256700--Sobic003G396200 Sobic010G256700--Sobic006G182900 Sobic010G256700--Sobic001G159400 Sobic010G248700 Sobic010G248700 Sobic010G256700--Sobic010G248700 Sobic010G256700--Sobic007G193700 Sobic006G133900 Sobic006G133900 Sobic010G256700--Sobic006G133900 Sobic001G454500 Sobic001G454500 Sobic010G256700--Sobic001G454500 Sobic002G104100 Sobic002G104100 Sobic010G256700--Sobic002G104100 Sobic004G028500--Sobic001G468700 Sobic004G028500--Sobic003G313300 Sobic001G100100 Sobic001G100100 Sobic004G028500--Sobic001G100100 Sobic004G028500--Sobic003G017100 Sobic010G002700 Sobic010G002700 Sobic004G028500--Sobic010G002700 Sobic004G028500--Sobic005G045000 Sobic004G028500--Sobic002G006600 Sobic003G004200 Sobic003G004200 Sobic004G028500--Sobic003G004200 Sobic001G198100 Sobic001G198100 Sobic004G028500--Sobic001G198100 Sobic007G106800--Sobic003G191700 Sobic007G106800--Sobic006G133900 Sobic003G155100 Sobic003G155100 Sobic007G106800--Sobic003G155100 Sobic007G106800--Sobic001G375100 Sobic007G106800--Sobic001G454500 Sobic004G174200 Sobic004G174200 Sobic007G106800--Sobic004G174200 Sobic006G065600 Sobic006G065600 Sobic007G106800--Sobic006G065600 Sobic008G001200 Sobic008G001200 Sobic007G106800--Sobic008G001200 Sobic003G198800 Sobic003G198800 Sobic007G106800--Sobic003G198800
Octagon: transcription factors


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