Gene annotation
Transcriptome id Sobic.009G034200.3,Sobic.009G034200.5,Sobic.009G034200.4
Synonym SbCIPK01, CIPK1;CBL-interacting protein kinases, Sb09g002900, CIPK1, SnRK3.16
Functional annotation CBL-interacting protein kinase 1 (PubMedID : 26320239)
Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5R1F1 , A0A1Z5R0P7 , C4P7U1
Pfam PF14531 PF03822 PF03822 PF07714 PF03822 PF00069
Panther DB PTHR24343 PTHR24343:SF143
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0007165signal transduction GO:0007165signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G17510 : CBL-interacting protein kinase 1
RAP-DB (Rice) LOC_Os05g04550.1 : CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a006881 , Zm00025a055331
Brachypodium -
Barley HORVU1Hr1G017240.10 , HORVU3Hr1G073110.1 , HORVU1Hr1G017380.5 , HORVU1Hr1G017380.8 , HORVU1Hr1G017380.9 , HORVU1Hr1G017380.1 , HORVU1Hr1G017380.2 , HORVU1Hr1G017380.3 , HORVU1Hr1G017380.4 , HORVU1Hr1G017380.6 , HORVU1Hr1G017380.7 , HORVU1Hr1G017240.1 , HORVU1Hr1G017240.3 , HORVU1Hr1G017240.2 , HORVU1Hr1G017240.5 , HORVU1Hr1G017240.4 , HORVU1Hr1G017240.7 , HORVU1Hr1G017240.6 , HORVU1Hr1G017240.9 , HORVU1Hr1G017240.8
Wheat TraesCS1A02G080700 , TraesCS1B02G098600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
2 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -
3 Sobic.009G140500 no apical meristem protein, putative, expressed -
4 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130
5 Sobic.003G179201 - -
6 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
7 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
8 Sobic.001G067850 - -
9 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
10 Sobic.004G188400 photoperiodic flowering time gene(PubMedID : 22394582)@FAD binding domain of DNA photolyase domain containing protein, expressed K12118: cryptochrome 1
11 Sobic.007G037900 oxidoreductase family, NAD-binding Rossmann fold containing protein, expressed -
12 Sobic.008G013600 - -
13 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
14 Sobic.003G429650 - -
15 Sobic.004G065650 - -
16 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
17 Sobic.010G202000 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
18 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
19 Sobic.005G144400 - -
20 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa


Gene co-expression network
sample Sobic009G034200 Sobic009G034200 Sobic003G345400 Sobic003G345400 Sobic009G034200--Sobic003G345400 Sobic007G113800 Sobic007G113800 Sobic009G034200--Sobic007G113800 Sobic009G140500 Sobic009G140500 Sobic009G034200--Sobic009G140500 Sobic006G228500 Sobic006G228500 Sobic009G034200--Sobic006G228500 Sobic003G179201 Sobic003G179201 Sobic009G034200--Sobic003G179201 Sobic002G399100 Sobic002G399100 Sobic009G034200--Sobic002G399100 Sobic010G056200 Sobic010G056200 Sobic009G034200--Sobic010G056200 Sobic001G067850 Sobic001G067850 Sobic009G034200--Sobic001G067850 Sobic004G113800 Sobic004G113800 Sobic009G034200--Sobic004G113800 Sobic009G205200 Sobic009G205200 Sobic003G345400--Sobic009G205200 Sobic001G107500 Sobic001G107500 Sobic003G345400--Sobic001G107500 Sobic002G350300 Sobic002G350300 Sobic003G345400--Sobic002G350300 Sobic004G121100 Sobic004G121100 Sobic003G345400--Sobic004G121100 Sobic003G345400--Sobic009G034200 Sobic003G345400--Sobic006G228500 Sobic001G333200 Sobic001G333200 Sobic003G345400--Sobic001G333200 Sobic001G119300 Sobic001G119300 Sobic003G345400--Sobic001G119300 Sobic003G345400--Sobic010G056200 Sobic003G148000 Sobic003G148000 Sobic007G113800--Sobic003G148000 Sobic006G079400 Sobic006G079400 Sobic007G113800--Sobic006G079400 Sobic005G110472 Sobic005G110472 Sobic007G113800--Sobic005G110472 Sobic010G202000 Sobic010G202000 Sobic007G113800--Sobic010G202000 Sobic005G144400 Sobic005G144400 Sobic007G113800--Sobic005G144400 Sobic007G113800--Sobic001G067850 Sobic002G243900 Sobic002G243900 Sobic007G113800--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic007G113800--Sobic006G048500 Sobic007G113800--Sobic003G179201 Sobic001G274200 Sobic001G274200 Sobic009G140500--Sobic001G274200 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic007G037900 Sobic007G037900 Sobic009G140500--Sobic007G037900 Sobic004G290800 Sobic004G290800 Sobic009G140500--Sobic004G290800 Sobic001G420200 Sobic001G420200 Sobic009G140500--Sobic001G420200 Sobic009G140500--Sobic003G179201 Sobic002G203200 Sobic002G203200 Sobic009G140500--Sobic002G203200 Sobic007G096600 Sobic007G096600 Sobic009G140500--Sobic007G096600 Sobic004G164400 Sobic004G164400 Sobic006G228500--Sobic004G164400 Sobic006G228500--Sobic004G121100 Sobic007G108500 Sobic007G108500 Sobic006G228500--Sobic007G108500 Sobic001G318432 Sobic001G318432 Sobic006G228500--Sobic001G318432 Sobic006G228500--Sobic001G107500 Sobic001G298600 Sobic001G298600 Sobic006G228500--Sobic001G298600 Sobic006G228500--Sobic010G056200 Sobic009G065100 Sobic009G065100 Sobic006G228500--Sobic009G065100 Sobic002G031400 Sobic002G031400 Sobic006G228500--Sobic002G031400 Sobic003G429650 Sobic003G429650 Sobic003G179201--Sobic003G429650 Sobic003G179201--Sobic006G048500 Sobic006G216800 Sobic006G216800 Sobic003G179201--Sobic006G216800 Sobic002G133400 Sobic002G133400 Sobic003G179201--Sobic002G133400 Sobic003G332800 Sobic003G332800 Sobic003G179201--Sobic003G332800 Sobic003G179201--Sobic003G148000 Sobic003G179201--Sobic010G202000 Sobic008G162900 Sobic008G162900 Sobic003G179201--Sobic008G162900 Sobic004G082400 Sobic004G082400 Sobic003G179201--Sobic004G082400 Sobic001G413500 Sobic001G413500 Sobic002G399100--Sobic001G413500 Sobic001G497300 Sobic001G497300 Sobic002G399100--Sobic001G497300 Sobic001G512700 Sobic001G512700 Sobic002G399100--Sobic001G512700 Sobic007G104800 Sobic007G104800 Sobic002G399100--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic002G399100--Sobic004G205600 Sobic002G399100--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic002G399100--Sobic003G298100 Sobic010G153700 Sobic010G153700 Sobic002G399100--Sobic010G153700 Sobic003G029700 Sobic003G029700 Sobic002G399100--Sobic003G029700 Sobic010G056200--Sobic001G107500 Sobic010G056200--Sobic004G113800 Sobic004G083700 Sobic004G083700 Sobic010G056200--Sobic004G083700 Sobic007G052900 Sobic007G052900 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic010G056200--Sobic009G065100 Sobic010G056200--Sobic006G228500 Sobic002G309800 Sobic002G309800 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200 Sobic001G067850--Sobic002G243900 Sobic007G178700 Sobic007G178700 Sobic001G067850--Sobic007G178700 Sobic001G067850--Sobic001G274200 Sobic001G067850--Sobic009G140500 Sobic001G067850--Sobic001G420200 Sobic001G067850--Sobic005G144400 Sobic001G067850--Sobic007G096600 Sobic001G067850--Sobic007G037900 Sobic006G088580 Sobic006G088580 Sobic001G067850--Sobic006G088580 Sobic004G113800--Sobic010G056200 Sobic004G113800--Sobic007G052900 Sobic004G113800--Sobic009G140500 Sobic001G368400 Sobic001G368400 Sobic004G113800--Sobic001G368400 Sobic001G118100 Sobic001G118100 Sobic004G113800--Sobic001G118100 Sobic004G113800--Sobic009G034200 Sobic004G241500 Sobic004G241500 Sobic004G113800--Sobic004G241500 Sobic004G174400 Sobic004G174400 Sobic004G113800--Sobic004G174400 Sobic004G113800--Sobic003G324000
Octagon: transcription factors


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