Gene annotation
Transcriptome id Sobic.002G318000.1
Synonym Sb02g034690
Functional annotation DUF584 domain containing protein, putative, expressed
UniProt C5XA06
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11700 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os07g33270.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014786 , Zm00025a048216
Brachypodium KQK15998
Barley HORVU2Hr1G046550.4 , HORVU2Hr1G046550.1 , HORVU2Hr1G046550.2 , HORVU2Hr1G046550.3
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
3 Sobic.006G246100 one cut domain family member 3, putative, expressed -
4 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
5 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
6 Sobic.006G274700 expressed protein -
7 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
8 Sobic.007G187800 mtN19, putative, expressed -
9 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
10 Sobic.003G254900 no apical meristem protein, putative, expressed -
11 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
12 Sobic.003G037500 WRKY107, expressed -
13 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
14 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
15 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
16 Sobic.007G025500 amino acid transporter, putative, expressed -
17 Sobic.003G192100 expressed protein -
18 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
19 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
20 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter


Gene co-expression network
sample Sobic002G318000 Sobic002G318000 Sobic002G070200 Sobic002G070200 Sobic002G318000--Sobic002G070200 Sobic009G221400 Sobic009G221400 Sobic002G318000--Sobic009G221400 Sobic006G246100 Sobic006G246100 Sobic002G318000--Sobic006G246100 Sobic004G010300 Sobic004G010300 Sobic002G318000--Sobic004G010300 Sobic004G186500 Sobic004G186500 Sobic002G318000--Sobic004G186500 Sobic006G274700 Sobic006G274700 Sobic002G318000--Sobic006G274700 Sobic002G377100 Sobic002G377100 Sobic002G318000--Sobic002G377100 Sobic007G187800 Sobic007G187800 Sobic002G318000--Sobic007G187800 Sobic001G192600 Sobic001G192600 Sobic002G318000--Sobic001G192600 Sobic002G070200--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic002G070200--Sobic003G162700 Sobic002G373001 Sobic002G373001 Sobic002G070200--Sobic002G373001 Sobic002G333400 Sobic002G333400 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic002G353900 Sobic002G353900 Sobic009G221400--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic009G221400--Sobic003G041600 Sobic006G158600 Sobic006G158600 Sobic009G221400--Sobic006G158600 Sobic009G221400--Sobic008G044300 Sobic002G336600 Sobic002G336600 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G070400 Sobic009G070400 Sobic009G221400--Sobic009G070400 Sobic002G192000 Sobic002G192000 Sobic009G221400--Sobic002G192000 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic005G080200 Sobic005G080200 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic003G277500 Sobic003G277500 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic004G010300--Sobic002G070200 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic004G010300--Sobic010G194300 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic006G274700--Sobic009G221400 Sobic006G274700--Sobic002G353900 Sobic003G043600 Sobic003G043600 Sobic006G274700--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic006G274700--Sobic003G303100 Sobic006G274700--Sobic002G192000 Sobic002G338500 Sobic002G338500 Sobic006G274700--Sobic002G338500 Sobic003G382600 Sobic003G382600 Sobic006G274700--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic006G274700--Sobic002G055700 Sobic003G254900 Sobic003G254900 Sobic006G274700--Sobic003G254900 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic001G059400 Sobic001G059400 Sobic002G377100--Sobic001G059400 Sobic002G377100--Sobic003G254900 Sobic003G102200 Sobic003G102200 Sobic002G377100--Sobic003G102200 Sobic001G195100 Sobic001G195100 Sobic002G377100--Sobic001G195100 Sobic010G163000 Sobic010G163000 Sobic002G377100--Sobic010G163000 Sobic002G377100--Sobic001G449700 Sobic004G297100 Sobic004G297100 Sobic002G377100--Sobic004G297100 Sobic002G377100--Sobic002G333400 Sobic003G078100 Sobic003G078100 Sobic007G187800--Sobic003G078100 Sobic009G008900 Sobic009G008900 Sobic007G187800--Sobic009G008900 Sobic007G025500 Sobic007G025500 Sobic007G187800--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic007G187800--Sobic008G136400 Sobic007G187800--Sobic006G158600 Sobic006G173900 Sobic006G173900 Sobic007G187800--Sobic006G173900 Sobic009G183400 Sobic009G183400 Sobic007G187800--Sobic009G183400 Sobic001G119400 Sobic001G119400 Sobic007G187800--Sobic001G119400 Sobic002G414600 Sobic002G414600 Sobic007G187800--Sobic002G414600 Sobic001G192600--Sobic002G192000 Sobic001G367600 Sobic001G367600 Sobic001G192600--Sobic001G367600 Sobic001G038900 Sobic001G038900 Sobic001G192600--Sobic001G038900 Sobic001G192600--Sobic006G158600 Sobic001G423800 Sobic001G423800 Sobic001G192600--Sobic001G423800 Sobic001G055600 Sobic001G055600 Sobic001G192600--Sobic001G055600 Sobic001G481100 Sobic001G481100 Sobic001G192600--Sobic001G481100 Sobic001G192600--Sobic009G221400 Sobic001G192600--Sobic002G353900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.