Gene annotation
Transcriptome id Sobic.001G052000.4,Sobic.001G052000.3,Sobic.001G052000.1,Sobic.001G052000.2
Synonym Sb01g004766
Functional annotation aspartic proteinase nepenthesin-1 precursor, putative, expressed
UniProt A0A1B6QHD8 , A0A1B6QHE1 , A0A1B6QHF6
Pfam PF14541
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g26470.1 : aspartic proteinase nepenthesin-1 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G052000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G366600 expressed protein -
2 Sobic.006G106100 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
3 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
4 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
5 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
6 Sobic.006G047400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
7 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
8 Sobic.002G119900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
10 Sobic.010G206200 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
11 Sobic.001G374700 40S ribosomal protein S21, putative, expressed K02971: RP-S21e, small subunit ribosomal protein S21e
12 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
13 Sobic.001G390300 OsCam1-1 - Calmodulin, expressed K02183: calmodulin
14 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
16 Sobic.010G205400 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
17 Sobic.004G211833 - K02267: cytochrome c oxidase subunit 6b
18 Sobic.003G408100 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
19 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
20 Sobic.007G139100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1


Gene co-expression network
sample Sobic001G052000 Sobic001G052000 Sobic002G366600 Sobic002G366600 Sobic001G052000--Sobic002G366600 Sobic006G106100 Sobic006G106100 Sobic001G052000--Sobic006G106100 Sobic010G008400 Sobic010G008400 Sobic001G052000--Sobic010G008400 Sobic003G110200 Sobic003G110200 Sobic001G052000--Sobic003G110200 Sobic001G493001 Sobic001G493001 Sobic001G052000--Sobic001G493001 Sobic006G047400 Sobic006G047400 Sobic001G052000--Sobic006G047400 Sobic001G130301 Sobic001G130301 Sobic001G052000--Sobic001G130301 Sobic002G119900 Sobic002G119900 Sobic001G052000--Sobic002G119900 Sobic009G121900 Sobic009G121900 Sobic001G052000--Sobic009G121900 Sobic010G213700 Sobic010G213700 Sobic002G366600--Sobic010G213700 Sobic009G077800 Sobic009G077800 Sobic002G366600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic002G366600--Sobic009G139400 Sobic007G184600 Sobic007G184600 Sobic002G366600--Sobic007G184600 Sobic003G297600 Sobic003G297600 Sobic002G366600--Sobic003G297600 Sobic002G017800 Sobic002G017800 Sobic002G366600--Sobic002G017800 Sobic002G055700 Sobic002G055700 Sobic002G366600--Sobic002G055700 Sobic009G231000 Sobic009G231000 Sobic002G366600--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G366600--Sobic005G183100 Sobic001G091801 Sobic001G091801 Sobic006G106100--Sobic001G091801 Sobic007G019400 Sobic007G019400 Sobic006G106100--Sobic007G019400 Sobic001G376600 Sobic001G376600 Sobic006G106100--Sobic001G376600 Sobic010G206200 Sobic010G206200 Sobic006G106100--Sobic010G206200 Sobic010G251600 Sobic010G251600 Sobic006G106100--Sobic010G251600 Sobic004G280700 Sobic004G280700 Sobic006G106100--Sobic004G280700 Sobic002G175100 Sobic002G175100 Sobic006G106100--Sobic002G175100 Sobic004G331400 Sobic004G331400 Sobic006G106100--Sobic004G331400 Sobic001G054900 Sobic001G054900 Sobic006G106100--Sobic001G054900 Sobic002G176100 Sobic002G176100 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic003G319500 Sobic003G319500 Sobic010G008400--Sobic003G319500 Sobic002G327300 Sobic002G327300 Sobic010G008400--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic010G008400--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic010G008400--Sobic001G500000 Sobic010G085800 Sobic010G085800 Sobic010G008400--Sobic010G085800 Sobic010G008400--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G008400--Sobic009G111000 Sobic001G449700 Sobic001G449700 Sobic003G110200--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic003G110200--Sobic003G202200 Sobic007G149300 Sobic007G149300 Sobic003G110200--Sobic007G149300 Sobic002G092801 Sobic002G092801 Sobic003G110200--Sobic002G092801 Sobic003G102200 Sobic003G102200 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic001G493001--Sobic001G130301 Sobic001G374700 Sobic001G374700 Sobic001G493001--Sobic001G374700 Sobic001G493001--Sobic006G047400 Sobic001G493001--Sobic007G184600 Sobic001G402050 Sobic001G402050 Sobic001G493001--Sobic001G402050 Sobic009G050300 Sobic009G050300 Sobic001G493001--Sobic009G050300 Sobic001G018900 Sobic001G018900 Sobic001G493001--Sobic001G018900 Sobic002G081600 Sobic002G081600 Sobic001G493001--Sobic002G081600 Sobic002G200600 Sobic002G200600 Sobic001G493001--Sobic002G200600 Sobic009G166500 Sobic009G166500 Sobic006G047400--Sobic009G166500 Sobic006G047400--Sobic001G374700 Sobic009G163800 Sobic009G163800 Sobic006G047400--Sobic009G163800 Sobic006G047400--Sobic001G493001 Sobic006G047400--Sobic002G175100 Sobic003G408100 Sobic003G408100 Sobic006G047400--Sobic003G408100 Sobic006G047400--Sobic001G091801 Sobic006G047400--Sobic001G130301 Sobic009G215200 Sobic009G215200 Sobic006G047400--Sobic009G215200 Sobic001G130301--Sobic009G215200 Sobic007G197800 Sobic007G197800 Sobic001G130301--Sobic007G197800 Sobic006G116700 Sobic006G116700 Sobic001G130301--Sobic006G116700 Sobic001G130301--Sobic001G018900 Sobic001G130301--Sobic001G493001 Sobic001G130301--Sobic001G402050 Sobic001G130301--Sobic009G050300 Sobic001G130301--Sobic002G200600 Sobic001G130301--Sobic001G374700 Sobic007G002800 Sobic007G002800 Sobic002G119900--Sobic007G002800 Sobic001G059700 Sobic001G059700 Sobic002G119900--Sobic001G059700 Sobic002G119900--Sobic010G085800 Sobic001G310300 Sobic001G310300 Sobic002G119900--Sobic001G310300 Sobic002G119900--Sobic006G106100 Sobic001G014000 Sobic001G014000 Sobic002G119900--Sobic001G014000 Sobic002G119900--Sobic002G175100 Sobic002G119900--Sobic010G008400 Sobic001G444800 Sobic001G444800 Sobic002G119900--Sobic001G444800 Sobic002G407100 Sobic002G407100 Sobic009G121900--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic009G121900--Sobic007G127100 Sobic004G064400 Sobic004G064400 Sobic009G121900--Sobic004G064400 Sobic009G121900--Sobic010G008400 Sobic009G121900--Sobic002G327300 Sobic009G065300 Sobic009G065300 Sobic009G121900--Sobic009G065300 Sobic009G121900--Sobic003G110200 Sobic001G432700 Sobic001G432700 Sobic009G121900--Sobic001G432700 Sobic003G376100 Sobic003G376100 Sobic009G121900--Sobic003G376100
Octagon: transcription factors


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