Gene annotation
Transcriptome id Sobic.003G237900.1
Synonym AKT1, Sb03g029520, KT1, ATAKT1
Functional annotation potassium channel AKT1, putative, expressed
UniProt C5XF65
Pfam PF07885 PF00027 PF11834 PF13857 PF12796
Panther DB PTHR10217 PTHR10217:SF477
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26650 : K+ transporter 1
RAP-DB (Rice) LOC_Os01g45990.1 : potassium channel AKT1, putative, expressed
MaizeGDB (Corn) Zm00025a038685 , Zm00025a028250
Brachypodium KQK08971 , KQK08970 , PNT72497 , PNT72498
Barley HORVU3Hr1G058300.5 , HORVU3Hr1G058300.4 , HORVU3Hr1G058300.3 , HORVU3Hr1G058300.2 , HORVU3Hr1G058300.1
Wheat TraesCS3D02G219600 , TraesCS3A02G233800 , TraesCS3A02G233800 , TraesCS3B02G265500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239200 zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
2 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
3 Sobic.009G046600 stress-related protein, putative, expressed -
4 Sobic.004G191700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
5 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.001G052300 expressed protein -
7 Sobic.007G156600 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
9 Sobic.009G066800 - -
10 Sobic.002G036150 - -
11 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
13 Sobic.009G179500 expressed protein -
14 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
15 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
17 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.009G129000 E3 ubiquitin-protein ligase MGRN1, putative, expressed -
19 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
20 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic003G237900 Sobic003G237900 Sobic002G239200 Sobic002G239200 Sobic003G237900--Sobic002G239200 Sobic010G041700 Sobic010G041700 Sobic003G237900--Sobic010G041700 Sobic009G046600 Sobic009G046600 Sobic003G237900--Sobic009G046600 Sobic004G191700 Sobic004G191700 Sobic003G237900--Sobic004G191700 Sobic009G255500 Sobic009G255500 Sobic003G237900--Sobic009G255500 Sobic001G052300 Sobic001G052300 Sobic003G237900--Sobic001G052300 Sobic007G156600 Sobic007G156600 Sobic003G237900--Sobic007G156600 Sobic002G036100 Sobic002G036100 Sobic003G237900--Sobic002G036100 Sobic009G066800 Sobic009G066800 Sobic003G237900--Sobic009G066800 Sobic006G165100 Sobic006G165100 Sobic002G239200--Sobic006G165100 Sobic002G239200--Sobic001G052300 Sobic003G063200 Sobic003G063200 Sobic002G239200--Sobic003G063200 Sobic002G359300 Sobic002G359300 Sobic002G239200--Sobic002G359300 Sobic005G028700 Sobic005G028700 Sobic002G239200--Sobic005G028700 Sobic004G247200 Sobic004G247200 Sobic002G239200--Sobic004G247200 Sobic004G117600 Sobic004G117600 Sobic002G239200--Sobic004G117600 Sobic002G239200--Sobic009G255500 Sobic009G179500 Sobic009G179500 Sobic002G239200--Sobic009G179500 Sobic010G041700--Sobic009G046600 Sobic005G010200 Sobic005G010200 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic007G151100 Sobic007G151100 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic010G041700--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900 Sobic004G157000 Sobic004G157000 Sobic009G046600--Sobic004G157000 Sobic009G046600--Sobic005G028700 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic009G046600--Sobic010G041700 Sobic009G023200 Sobic009G023200 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic010G178200 Sobic010G178200 Sobic009G046600--Sobic010G178200 Sobic009G046600--Sobic007G151100 Sobic004G191700--Sobic003G237900 Sobic004G191700--Sobic009G046600 Sobic004G191700--Sobic010G041700 Sobic001G012800 Sobic001G012800 Sobic004G191700--Sobic001G012800 Sobic008G151300 Sobic008G151300 Sobic004G191700--Sobic008G151300 Sobic004G191700--Sobic009G066800 Sobic010G232100 Sobic010G232100 Sobic004G191700--Sobic010G232100 Sobic006G192500 Sobic006G192500 Sobic004G191700--Sobic006G192500 Sobic004G191700--Sobic005G010200 Sobic008G177800 Sobic008G177800 Sobic009G255500--Sobic008G177800 Sobic009G255500--Sobic001G052300 Sobic009G255500--Sobic006G165100 Sobic009G183300 Sobic009G183300 Sobic009G255500--Sobic009G183300 Sobic002G294700 Sobic002G294700 Sobic009G255500--Sobic002G294700 Sobic002G248100 Sobic002G248100 Sobic009G255500--Sobic002G248100 Sobic001G101500 Sobic001G101500 Sobic009G255500--Sobic001G101500 Sobic003G324400 Sobic003G324400 Sobic009G255500--Sobic003G324400 Sobic010G234600 Sobic010G234600 Sobic009G255500--Sobic010G234600 Sobic001G052300--Sobic009G255500 Sobic001G052300--Sobic006G165100 Sobic001G052300--Sobic003G324400 Sobic005G037000 Sobic005G037000 Sobic001G052300--Sobic005G037000 Sobic001G052300--Sobic009G183300 Sobic001G052300--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic001G052300--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic001G052300--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G052300--Sobic001G441100 Sobic007G156600--Sobic003G237900 Sobic003G431000 Sobic003G431000 Sobic007G156600--Sobic003G431000 Sobic003G363200 Sobic003G363200 Sobic007G156600--Sobic003G363200 Sobic006G026700 Sobic006G026700 Sobic007G156600--Sobic006G026700 Sobic007G156600--Sobic002G239200 Sobic007G156600--Sobic002G036100 Sobic002G188700 Sobic002G188700 Sobic007G156600--Sobic002G188700 Sobic010G200700 Sobic010G200700 Sobic007G156600--Sobic010G200700 Sobic008G036000 Sobic008G036000 Sobic007G156600--Sobic008G036000 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200 Sobic009G066800--Sobic002G036150 Sobic009G066800--Sobic005G010200 Sobic009G066800--Sobic010G200700 Sobic009G247300 Sobic009G247300 Sobic009G066800--Sobic009G247300 Sobic009G066800--Sobic002G036100 Sobic009G111200 Sobic009G111200 Sobic009G066800--Sobic009G111200 Sobic009G066800--Sobic006G089300 Sobic009G066800--Sobic010G041700 Sobic009G066800--Sobic002G359300
Octagon: transcription factors


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