Gene annotation
Transcriptome id Sobic.006G098600.1
Synonym Sb06g018290
Functional annotation expressed protein
UniProt A0A1B6PL73
Pfam -
Panther DB PTHR33779 PTHR33779:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60520 : -
RAP-DB (Rice) LOC_Os04g37700.1 : expressed protein
MaizeGDB (Corn) Zm00025a011177 , Zm00025a056173
Brachypodium KQJ99985
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
2 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
3 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
4 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
8 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
9 Sobic.002G207300 tetraspanin family protein, putative, expressed -
10 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
11 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
12 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
13 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
14 Sobic.004G084100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
17 Sobic.007G196600 proteophosphoglycan ppg4, putative, expressed K13456: RPM1-interacting protein 4
18 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
19 Sobic.002G185200 VQ domain containing protein, putative, expressed -
20 Sobic.003G425200 Calmodulin-like protein 1(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic006G098600 Sobic006G098600 Sobic001G410100 Sobic001G410100 Sobic006G098600--Sobic001G410100 Sobic004G065900 Sobic004G065900 Sobic006G098600--Sobic004G065900 Sobic010G102000 Sobic010G102000 Sobic006G098600--Sobic010G102000 Sobic007G090300 Sobic007G090300 Sobic006G098600--Sobic007G090300 Sobic004G086800 Sobic004G086800 Sobic006G098600--Sobic004G086800 Sobic001G314700 Sobic001G314700 Sobic006G098600--Sobic001G314700 Sobic003G341100 Sobic003G341100 Sobic006G098600--Sobic003G341100 Sobic001G084000 Sobic001G084000 Sobic006G098600--Sobic001G084000 Sobic002G207300 Sobic002G207300 Sobic006G098600--Sobic002G207300 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic001G410100--Sobic002G207300 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic009G100500 Sobic009G100500 Sobic001G410100--Sobic009G100500 Sobic002G118600 Sobic002G118600 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic001G410100--Sobic004G065900 Sobic004G065900--Sobic002G207300 Sobic001G095700 Sobic001G095700 Sobic004G065900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic004G065900--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic004G065900--Sobic001G118900 Sobic002G294600 Sobic002G294600 Sobic004G065900--Sobic002G294600 Sobic006G146500 Sobic006G146500 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic009G010400 Sobic009G010400 Sobic004G065900--Sobic009G010400 Sobic009G217500 Sobic009G217500 Sobic010G102000--Sobic009G217500 Sobic010G105300 Sobic010G105300 Sobic010G102000--Sobic010G105300 Sobic010G102000--Sobic003G341100 Sobic002G232800 Sobic002G232800 Sobic010G102000--Sobic002G232800 Sobic001G064900 Sobic001G064900 Sobic010G102000--Sobic001G064900 Sobic010G102000--Sobic007G145700 Sobic010G023200 Sobic010G023200 Sobic010G102000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic010G102000--Sobic007G077100 Sobic006G273800 Sobic006G273800 Sobic010G102000--Sobic006G273800 Sobic007G090300--Sobic009G100500 Sobic006G259000 Sobic006G259000 Sobic007G090300--Sobic006G259000 Sobic002G199500 Sobic002G199500 Sobic007G090300--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic007G090300--Sobic002G232800 Sobic002G138700 Sobic002G138700 Sobic007G090300--Sobic002G138700 Sobic007G090300--Sobic003G341100 Sobic004G086800--Sobic009G010400 Sobic003G416500 Sobic003G416500 Sobic004G086800--Sobic003G416500 Sobic004G086800--Sobic006G259000 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic004G086800--Sobic010G102000 Sobic004G086800--Sobic002G138700 Sobic004G086800--Sobic001G287600 Sobic001G314700--Sobic007G145700 Sobic004G025000 Sobic004G025000 Sobic001G314700--Sobic004G025000 Sobic001G081600 Sobic001G081600 Sobic001G314700--Sobic001G081600 Sobic001G314700--Sobic006G146500 Sobic001G462800 Sobic001G462800 Sobic001G314700--Sobic001G462800 Sobic001G314700--Sobic003G341100 Sobic001G314700--Sobic002G294600 Sobic001G314700--Sobic003G352400 Sobic001G314700--Sobic002G118600 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic001G084000--Sobic002G138700 Sobic001G314800 Sobic001G314800 Sobic001G084000--Sobic001G314800 Sobic001G084000--Sobic006G098600 Sobic005G175300 Sobic005G175300 Sobic001G084000--Sobic005G175300 Sobic001G084000--Sobic001G287600 Sobic001G084000--Sobic007G090300 Sobic004G331800 Sobic004G331800 Sobic001G084000--Sobic004G331800 Sobic007G139900 Sobic007G139900 Sobic001G084000--Sobic007G139900 Sobic001G084000--Sobic004G086800 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic003G425200 Sobic003G425200 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic002G207300--Sobic001G410100 Sobic002G207300--Sobic001G095700
Octagon: transcription factors


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