Gene annotation
Transcriptome id Sobic.001G044800.1,Sobic.001G044800.2
Synonym AtSIP2, SIP2, Sb01g004130
Functional annotation uncharacterized glycosyltransferase, putative, expressed
UniProt A0A1Z5S4T8 , C5WW34
Pfam PF05691
Panther DB PTHR31268 PTHR31268:SF9
NCBI CDD -
KEGG Orthology K06617; raffinose synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57520 : seed imbibition 2
RAP-DB (Rice) LOC_Os07g10840.1 : uncharacterized glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a045384 , Zm00025a004984 , Zm00025a004986 , Zm00025a008682
Brachypodium KQK20388 , KQK20387
Barley HORVU3Hr1G020780.10 , HORVU3Hr1G020780.8 , HORVU3Hr1G020780.9 , HORVU3Hr1G020780.1 , HORVU3Hr1G020780.2 , HORVU3Hr1G020780.3 , HORVU3Hr1G020780.4 , HORVU3Hr1G020780.5 , HORVU3Hr1G020780.6 , HORVU3Hr1G020780.7
Wheat TraesCS3A02G113900 , TraesCS3A02G113900 , TraesCS3B02G133400 , TraesCS7A02G134100 , TraesCS7B02G035200 , TraesCS7B02G035200 , TraesCS3D02G116400 , TraesCS3D02G116400 , TraesCS7D02G133500 , TraesCS7D02G133500
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G044800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G183100 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.003G184765 - -
3 Sobic.005G218500 Jacalin-like lectin domain containing protein, putative, expressed -
4 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
5 Sobic.003G423200 NAM, putative, expressed -
6 Sobic.003G109832 - -
7 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
8 Sobic.003G248901 - -
9 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.004G092000 expressed protein -
11 Sobic.005G090600 peptide transporter PTR2, putative, expressed -
12 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
13 Sobic.001G095750 - -
14 Sobic.003G376200 expressed protein -
15 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
16 Sobic.008G085350 - -
17 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
18 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
19 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.004G143801 - -


Gene co-expression network
sample Sobic001G044800 Sobic001G044800 Sobic007G183100 Sobic007G183100 Sobic001G044800--Sobic007G183100 Sobic003G184765 Sobic003G184765 Sobic001G044800--Sobic003G184765 Sobic005G218500 Sobic005G218500 Sobic001G044800--Sobic005G218500 Sobic002G160600 Sobic002G160600 Sobic001G044800--Sobic002G160600 Sobic003G423200 Sobic003G423200 Sobic001G044800--Sobic003G423200 Sobic003G109832 Sobic003G109832 Sobic001G044800--Sobic003G109832 Sobic001G314300 Sobic001G314300 Sobic001G044800--Sobic001G314300 Sobic003G248901 Sobic003G248901 Sobic001G044800--Sobic003G248901 Sobic010G214200 Sobic010G214200 Sobic001G044800--Sobic010G214200 Sobic007G183100--Sobic001G044800 Sobic007G183100--Sobic002G160600 Sobic007G183100--Sobic005G218500 Sobic007G064800 Sobic007G064800 Sobic007G183100--Sobic007G064800 Sobic004G143801 Sobic004G143801 Sobic007G183100--Sobic004G143801 Sobic001G494600 Sobic001G494600 Sobic007G183100--Sobic001G494600 Sobic007G183100--Sobic003G184765 Sobic001G432500 Sobic001G432500 Sobic007G183100--Sobic001G432500 Sobic001G319350 Sobic001G319350 Sobic007G183100--Sobic001G319350 Sobic003G184765--Sobic001G044800 Sobic003G184765--Sobic001G494600 Sobic003G184765--Sobic004G143801 Sobic002G093600 Sobic002G093600 Sobic003G184765--Sobic002G093600 Sobic003G184765--Sobic007G183100 Sobic002G298400 Sobic002G298400 Sobic003G184765--Sobic002G298400 Sobic007G168000 Sobic007G168000 Sobic003G184765--Sobic007G168000 Sobic002G391700 Sobic002G391700 Sobic003G184765--Sobic002G391700 Sobic002G040400 Sobic002G040400 Sobic003G184765--Sobic002G040400 Sobic003G378301 Sobic003G378301 Sobic005G218500--Sobic003G378301 Sobic002G216500 Sobic002G216500 Sobic005G218500--Sobic002G216500 Sobic001G056400 Sobic001G056400 Sobic005G218500--Sobic001G056400 Sobic008G075400 Sobic008G075400 Sobic005G218500--Sobic008G075400 Sobic005G218500--Sobic002G160600 Sobic004G220600 Sobic004G220600 Sobic005G218500--Sobic004G220600 Sobic007G076000 Sobic007G076000 Sobic005G218500--Sobic007G076000 Sobic005G182701 Sobic005G182701 Sobic005G218500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic005G218500--Sobic007G055600 Sobic002G160600--Sobic007G064800 Sobic006G014700 Sobic006G014700 Sobic002G160600--Sobic006G014700 Sobic002G160600--Sobic005G218500 Sobic002G160600--Sobic002G216500 Sobic001G314800 Sobic001G314800 Sobic002G160600--Sobic001G314800 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic006G265000 Sobic006G265000 Sobic002G160600--Sobic006G265000 Sobic002G160600--Sobic007G183100 Sobic007G025900 Sobic007G025900 Sobic003G423200--Sobic007G025900 Sobic010G273700 Sobic010G273700 Sobic003G423200--Sobic010G273700 Sobic003G423200--Sobic003G109832 Sobic004G092000 Sobic004G092000 Sobic003G423200--Sobic004G092000 Sobic003G423200--Sobic001G044800 Sobic005G049475 Sobic005G049475 Sobic003G423200--Sobic005G049475 Sobic002G137800 Sobic002G137800 Sobic003G423200--Sobic002G137800 Sobic009G227800 Sobic009G227800 Sobic003G423200--Sobic009G227800 Sobic003G376200 Sobic003G376200 Sobic003G423200--Sobic003G376200 Sobic003G109832--Sobic010G273700 Sobic003G109832--Sobic001G314300 Sobic003G109832--Sobic009G227800 Sobic001G095750 Sobic001G095750 Sobic003G109832--Sobic001G095750 Sobic004G006500 Sobic004G006500 Sobic003G109832--Sobic004G006500 Sobic003G370400 Sobic003G370400 Sobic003G109832--Sobic003G370400 Sobic003G109832--Sobic003G423200 Sobic003G109832--Sobic002G137800 Sobic002G185200 Sobic002G185200 Sobic003G109832--Sobic002G185200 Sobic006G114200 Sobic006G114200 Sobic001G314300--Sobic006G114200 Sobic001G314300--Sobic001G095750 Sobic001G314300--Sobic003G109832 Sobic001G314300--Sobic009G227800 Sobic001G314700 Sobic001G314700 Sobic001G314300--Sobic001G314700 Sobic001G314300--Sobic004G092000 Sobic001G314300--Sobic010G273700 Sobic001G314300--Sobic002G185200 Sobic003G339900 Sobic003G339900 Sobic001G314300--Sobic003G339900 Sobic006G045000 Sobic006G045000 Sobic003G248901--Sobic006G045000 Sobic003G248901--Sobic010G214200 SobicK044407 SobicK044407 Sobic003G248901--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic003G248901--Sobic001G012000 Sobic003G248901--Sobic003G378301 Sobic003G248901--Sobic001G056400 Sobic003G310200 Sobic003G310200 Sobic003G248901--Sobic003G310200 Sobic006G123400 Sobic006G123400 Sobic003G248901--Sobic006G123400 Sobic001G320700 Sobic001G320700 Sobic003G248901--Sobic001G320700 Sobic010G214200--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic010G214200--Sobic004G209500 Sobic004G217700 Sobic004G217700 Sobic010G214200--Sobic004G217700 Sobic001G056500 Sobic001G056500 Sobic010G214200--Sobic001G056500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic002G423600 Sobic002G423600 Sobic010G214200--Sobic002G423600 Sobic003G310500 Sobic003G310500 Sobic010G214200--Sobic003G310500 Sobic010G214200--SobicK044407
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.