Gene annotation
Transcriptome id Sobic.007G183100.1
Synonym RD22BP1, JIN1, Sb07g025330, ZBF1, MYC2, ATMYC2, JAI1
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1Z5RAN9
Pfam PF00010
Panther DB PTHR11514 PTHR11514:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32640 : Basic helix-loop-helix (bHLH) DNA-binding family protein
RAP-DB (Rice) LOC_Os09g34330.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005355
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G044800 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
2 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
3 Sobic.005G218500 Jacalin-like lectin domain containing protein, putative, expressed -
4 Sobic.007G064800 "Production of (E)-b-caryophyllene, cytoplasm"(PubMedID : 21880075)@Protein terpene synthase 6 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
5 Sobic.004G143801 - -
6 Sobic.001G494600 expressed protein -
7 Sobic.003G184765 - -
8 Sobic.001G432500 expressed protein -
9 Sobic.001G319350 - -
10 Sobic.008G075400 - -
11 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
12 Sobic.006G004400 Similer to the candidate causal gene ZmCCT for Flowerin time QTL(PubMedID : 19822732)@CCT motif family protein, expressed -
13 Sobic.003G423200 NAM, putative, expressed -
14 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
15 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
16 Sobic.002G073900 expressed protein -
17 Sobic.002G087500 - -
18 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.004G340800 OsFBX70 - F-box domain containing protein, expressed -
20 Sobic.001G448300 phytosulfokines precursor, putative, expressed -


Gene co-expression network
sample Sobic007G183100 Sobic007G183100 Sobic001G044800 Sobic001G044800 Sobic007G183100--Sobic001G044800 Sobic002G160600 Sobic002G160600 Sobic007G183100--Sobic002G160600 Sobic005G218500 Sobic005G218500 Sobic007G183100--Sobic005G218500 Sobic007G064800 Sobic007G064800 Sobic007G183100--Sobic007G064800 Sobic004G143801 Sobic004G143801 Sobic007G183100--Sobic004G143801 Sobic001G494600 Sobic001G494600 Sobic007G183100--Sobic001G494600 Sobic003G184765 Sobic003G184765 Sobic007G183100--Sobic003G184765 Sobic001G432500 Sobic001G432500 Sobic007G183100--Sobic001G432500 Sobic001G319350 Sobic001G319350 Sobic007G183100--Sobic001G319350 Sobic001G044800--Sobic007G183100 Sobic001G044800--Sobic003G184765 Sobic001G044800--Sobic005G218500 Sobic001G044800--Sobic002G160600 Sobic003G423200 Sobic003G423200 Sobic001G044800--Sobic003G423200 Sobic003G109832 Sobic003G109832 Sobic001G044800--Sobic003G109832 Sobic001G314300 Sobic001G314300 Sobic001G044800--Sobic001G314300 Sobic003G248901 Sobic003G248901 Sobic001G044800--Sobic003G248901 Sobic010G214200 Sobic010G214200 Sobic001G044800--Sobic010G214200 Sobic002G160600--Sobic007G064800 Sobic006G014700 Sobic006G014700 Sobic002G160600--Sobic006G014700 Sobic002G160600--Sobic005G218500 Sobic002G216500 Sobic002G216500 Sobic002G160600--Sobic002G216500 Sobic001G314800 Sobic001G314800 Sobic002G160600--Sobic001G314800 Sobic008G075400 Sobic008G075400 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic006G265000 Sobic006G265000 Sobic002G160600--Sobic006G265000 Sobic002G160600--Sobic007G183100 Sobic003G378301 Sobic003G378301 Sobic005G218500--Sobic003G378301 Sobic005G218500--Sobic002G216500 Sobic001G056400 Sobic001G056400 Sobic005G218500--Sobic001G056400 Sobic005G218500--Sobic008G075400 Sobic005G218500--Sobic002G160600 Sobic004G220600 Sobic004G220600 Sobic005G218500--Sobic004G220600 Sobic007G076000 Sobic007G076000 Sobic005G218500--Sobic007G076000 Sobic005G182701 Sobic005G182701 Sobic005G218500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic005G218500--Sobic007G055600 Sobic007G064800--Sobic002G160600 Sobic007G064800--Sobic007G183100 Sobic002G216400 Sobic002G216400 Sobic007G064800--Sobic002G216400 Sobic007G064800--Sobic005G218500 Sobic004G176900 Sobic004G176900 Sobic007G064800--Sobic004G176900 Sobic008G059400 Sobic008G059400 Sobic007G064800--Sobic008G059400 Sobic007G064800--Sobic008G075400 Sobic001G095750 Sobic001G095750 Sobic007G064800--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic007G064800--Sobic001G462800 Sobic002G298400 Sobic002G298400 Sobic004G143801--Sobic002G298400 Sobic002G087500 Sobic002G087500 Sobic004G143801--Sobic002G087500 Sobic002G040400 Sobic002G040400 Sobic004G143801--Sobic002G040400 Sobic002G391700 Sobic002G391700 Sobic004G143801--Sobic002G391700 Sobic002G093600 Sobic002G093600 Sobic004G143801--Sobic002G093600 Sobic008G077800 Sobic008G077800 Sobic004G143801--Sobic008G077800 Sobic008G028600 Sobic008G028600 Sobic004G143801--Sobic008G028600 Sobic006G007300 Sobic006G007300 Sobic004G143801--Sobic006G007300 Sobic008G028566 Sobic008G028566 Sobic004G143801--Sobic008G028566 Sobic001G261750 Sobic001G261750 Sobic001G494600--Sobic001G261750 Sobic001G494600--Sobic002G093600 Sobic008G028533 Sobic008G028533 Sobic001G494600--Sobic008G028533 Sobic008G145200 Sobic008G145200 Sobic001G494600--Sobic008G145200 Sobic001G494600--Sobic006G007300 Sobic003G184765--Sobic001G044800 Sobic003G184765--Sobic001G494600 Sobic003G184765--Sobic004G143801 Sobic003G184765--Sobic002G093600 Sobic003G184765--Sobic007G183100 Sobic003G184765--Sobic002G298400 Sobic007G168000 Sobic007G168000 Sobic003G184765--Sobic007G168000 Sobic003G184765--Sobic002G391700 Sobic003G184765--Sobic002G040400 Sobic001G432500--Sobic008G028600 Sobic001G432500--Sobic002G040400 Sobic001G432500--Sobic002G298400 Sobic001G432500--Sobic002G087500 Sobic005G219000 Sobic005G219000 Sobic001G432500--Sobic005G219000 Sobic006G005500 Sobic006G005500 Sobic001G432500--Sobic006G005500 Sobic001G432500--Sobic002G391700 Sobic001G125700 Sobic001G125700 Sobic001G432500--Sobic001G125700 Sobic001G432500--Sobic007G076000 Sobic001G319350--Sobic001G261750 Sobic001G319350--Sobic002G093600 Sobic001G319350--Sobic001G494600 Sobic001G319350--Sobic008G028533 Sobic001G319350--Sobic002G391700
Octagon: transcription factors


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