Gene annotation
Transcriptome id Sobic.007G064800.1
Synonym SbTPS4, SbTPS4;terpene synthase, ATTPS21, Sb07g005130, terpene synthase, TPS21
Functional annotation "Production of (E)-b-caryophyllene, cytoplasm" (PubMedID : 21880075)
Protein terpene synthase 6 (Os) (PubMedID : 27208977)
terpene synthase, putative, expressed
UniProt C5YHZ9
Pfam PF03936 PF01397
Panther DB PTHR31225:SF4 PTHR31225
NCBI CDD -
KEGG Orthology K15803; (-)-germacrene D synthase
Gene Ontology GO:0000287; magnesium ion binding GO:0008152metabolic process GO:0010333terpene synthase activity GO:0016829lyase activity


Orthologs (automatic annotation)
TAIR AT5G23960 : terpene synthase 21
RAP-DB (Rice) LOC_Os08g04500.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) Zm00025a054775
Brachypodium -
Barley -
Wheat TraesCS6B02G060300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
2 Sobic.007G183100 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.002G216400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.005G218500 Jacalin-like lectin domain containing protein, putative, expressed -
5 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.008G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
7 Sobic.008G075400 - -
8 Sobic.001G095750 - -
9 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
10 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
11 Sobic.001G118900 DUF292 domain containing protein, expressed -
12 Sobic.001G187600 cytochrome P450, putative, expressed K12153: phenylalanine N-monooxygenase
13 Sobic.003G131500 VQ domain containing protein, putative, expressed -
14 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
15 Sobic.010G231900 early nodulin 20 precursor, putative, expressed -
16 Sobic.004G092000 expressed protein -
17 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
18 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
19 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
20 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic007G064800 Sobic007G064800 Sobic002G160600 Sobic002G160600 Sobic007G064800--Sobic002G160600 Sobic007G183100 Sobic007G183100 Sobic007G064800--Sobic007G183100 Sobic002G216400 Sobic002G216400 Sobic007G064800--Sobic002G216400 Sobic005G218500 Sobic005G218500 Sobic007G064800--Sobic005G218500 Sobic004G176900 Sobic004G176900 Sobic007G064800--Sobic004G176900 Sobic008G059400 Sobic008G059400 Sobic007G064800--Sobic008G059400 Sobic008G075400 Sobic008G075400 Sobic007G064800--Sobic008G075400 Sobic001G095750 Sobic001G095750 Sobic007G064800--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic007G064800--Sobic001G462800 Sobic002G160600--Sobic007G064800 Sobic006G014700 Sobic006G014700 Sobic002G160600--Sobic006G014700 Sobic002G160600--Sobic005G218500 Sobic002G216500 Sobic002G216500 Sobic002G160600--Sobic002G216500 Sobic001G314800 Sobic001G314800 Sobic002G160600--Sobic001G314800 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic006G265000 Sobic006G265000 Sobic002G160600--Sobic006G265000 Sobic002G160600--Sobic007G183100 Sobic001G044800 Sobic001G044800 Sobic007G183100--Sobic001G044800 Sobic007G183100--Sobic002G160600 Sobic007G183100--Sobic005G218500 Sobic007G183100--Sobic007G064800 Sobic004G143801 Sobic004G143801 Sobic007G183100--Sobic004G143801 Sobic001G494600 Sobic001G494600 Sobic007G183100--Sobic001G494600 Sobic003G184765 Sobic003G184765 Sobic007G183100--Sobic003G184765 Sobic001G432500 Sobic001G432500 Sobic007G183100--Sobic001G432500 Sobic001G319350 Sobic001G319350 Sobic007G183100--Sobic001G319350 Sobic001G110900 Sobic001G110900 Sobic002G216400--Sobic001G110900 Sobic002G216400--Sobic001G095750 Sobic006G220300 Sobic006G220300 Sobic002G216400--Sobic006G220300 Sobic002G013900 Sobic002G013900 Sobic002G216400--Sobic002G013900 Sobic003G131500 Sobic003G131500 Sobic002G216400--Sobic003G131500 Sobic006G114200 Sobic006G114200 Sobic002G216400--Sobic006G114200 Sobic006G203000 Sobic006G203000 Sobic002G216400--Sobic006G203000 Sobic002G110200 Sobic002G110200 Sobic002G216400--Sobic002G110200 Sobic003G234800 Sobic003G234800 Sobic002G216400--Sobic003G234800 Sobic003G378301 Sobic003G378301 Sobic005G218500--Sobic003G378301 Sobic005G218500--Sobic002G216500 Sobic001G056400 Sobic001G056400 Sobic005G218500--Sobic001G056400 Sobic005G218500--Sobic008G075400 Sobic005G218500--Sobic002G160600 Sobic004G220600 Sobic004G220600 Sobic005G218500--Sobic004G220600 Sobic007G076000 Sobic007G076000 Sobic005G218500--Sobic007G076000 Sobic005G182701 Sobic005G182701 Sobic005G218500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic005G218500--Sobic007G055600 Sobic009G068900 Sobic009G068900 Sobic004G176900--Sobic009G068900 Sobic004G244100 Sobic004G244100 Sobic004G176900--Sobic004G244100 Sobic002G197600 Sobic002G197600 Sobic004G176900--Sobic002G197600 Sobic009G167000 Sobic009G167000 Sobic004G176900--Sobic009G167000 Sobic009G212800 Sobic009G212800 Sobic004G176900--Sobic009G212800 Sobic004G176900--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic004G176900--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic004G176900--Sobic008G058900 Sobic002G367900 Sobic002G367900 Sobic004G176900--Sobic002G367900 Sobic008G059400--Sobic007G064800 Sobic007G124100 Sobic007G124100 Sobic008G059400--Sobic007G124100 Sobic008G059400--Sobic002G160600 Sobic010G197700 Sobic010G197700 Sobic008G059400--Sobic010G197700 Sobic001G161200 Sobic001G161200 Sobic008G059400--Sobic001G161200 Sobic010G268200 Sobic010G268200 Sobic008G059400--Sobic010G268200 Sobic001G109100 Sobic001G109100 Sobic008G059400--Sobic001G109100 Sobic008G059400--Sobic004G176900 Sobic002G207300 Sobic002G207300 Sobic008G059400--Sobic002G207300 Sobic008G075400--Sobic005G218500 Sobic008G075400--Sobic004G220600 Sobic008G075400--Sobic002G216500 Sobic008G075400--Sobic002G160600 Sobic003G376200 Sobic003G376200 Sobic008G075400--Sobic003G376200 Sobic008G075400--Sobic003G378301 Sobic001G320700 Sobic001G320700 Sobic008G075400--Sobic001G320700 Sobic003G248901 Sobic003G248901 Sobic008G075400--Sobic003G248901 Sobic008G075400--Sobic004G140000 Sobic001G118900 Sobic001G118900 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic001G095750--Sobic006G114200 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic001G081600 Sobic001G081600 Sobic001G462800--Sobic001G081600 Sobic002G217100 Sobic002G217100 Sobic001G462800--Sobic002G217100 Sobic002G294600 Sobic002G294600 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic002G344700 Sobic002G344700 Sobic001G462800--Sobic002G344700 Sobic001G462800--Sobic002G367900 Sobic006G210300 Sobic006G210300 Sobic001G462800--Sobic006G210300 Sobic007G145700 Sobic007G145700 Sobic001G462800--Sobic007G145700 Sobic004G281200 Sobic004G281200 Sobic001G462800--Sobic004G281200
Octagon: transcription factors


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