Gene annotation
Transcriptome id Sobic.002G342400.1
Synonym CYP51G1, Sb02g036650, EMB1738, CYP51A2, CYP51
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
cytochrome P450 51, putative, expressed
UniProt C5XBN4
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF58
NCBI CDD KOG0684; Cytochrome P450
KEGG Orthology K05917; sterol 14alpha-demethylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G11680 : CYTOCHROME P450 51G1
RAP-DB (Rice) LOC_Os05g12040.1 : cytochrome P450 51, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G005360.1 , HORVU1Hr1G005360.3 , HORVU1Hr1G005360.2
Wheat TraesCS2B02G228600 , TraesCS2A02G201300 , TraesCS2D02G213700 , TraesCS1A02G034900 , TraesCS2A02G008200 , TraesCS2A02G008200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
2 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
7 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
9 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
10 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
11 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
12 Sobic.002G220000 expressed protein -
13 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
16 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
17 Sobic.003G250600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsGrx_I1 - glutaredoxin subgroup III, expressed -
18 Sobic.007G149300 expressed protein -
19 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
20 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -


Gene co-expression network
sample Sobic002G342400 Sobic002G342400 Sobic001G449700 Sobic001G449700 Sobic002G342400--Sobic001G449700 Sobic003G102200 Sobic003G102200 Sobic002G342400--Sobic003G102200 Sobic001G259600 Sobic001G259600 Sobic002G342400--Sobic001G259600 Sobic001G383700 Sobic001G383700 Sobic002G342400--Sobic001G383700 Sobic002G395300 Sobic002G395300 Sobic002G342400--Sobic002G395300 Sobic001G259700 Sobic001G259700 Sobic002G342400--Sobic001G259700 Sobic003G093000 Sobic003G093000 Sobic002G342400--Sobic003G093000 Sobic004G169200 Sobic004G169200 Sobic002G342400--Sobic004G169200 Sobic009G036000 Sobic009G036000 Sobic002G342400--Sobic009G036000 Sobic001G449700--Sobic001G383700 Sobic003G202200 Sobic003G202200 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic003G102200--Sobic002G342400 Sobic002G373001 Sobic002G373001 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic001G259600--Sobic001G259700 Sobic003G313800 Sobic003G313800 Sobic001G259600--Sobic003G313800 Sobic010G209100 Sobic010G209100 Sobic001G259600--Sobic010G209100 Sobic002G282300 Sobic002G282300 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic007G213800 Sobic007G213800 Sobic001G259600--Sobic007G213800 Sobic003G324400 Sobic003G324400 Sobic001G259600--Sobic003G324400 Sobic001G259600--Sobic004G169200 Sobic005G037000 Sobic005G037000 Sobic001G259600--Sobic005G037000 Sobic001G383700--Sobic003G202200 Sobic009G247900 Sobic009G247900 Sobic001G383700--Sobic009G247900 Sobic001G383700--Sobic001G449700 Sobic001G383700--Sobic007G149300 Sobic001G383700--Sobic009G036000 Sobic001G383700--Sobic006G263600 Sobic001G383700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic001G383700--Sobic004G191400 Sobic001G383700--Sobic002G395300 Sobic001G256700 Sobic001G256700 Sobic002G395300--Sobic001G256700 Sobic001G330100 Sobic001G330100 Sobic002G395300--Sobic001G330100 Sobic002G395300--Sobic004G169200 Sobic004G294400 Sobic004G294400 Sobic002G395300--Sobic004G294400 Sobic002G388900 Sobic002G388900 Sobic002G395300--Sobic002G388900 Sobic004G108200 Sobic004G108200 Sobic002G395300--Sobic004G108200 Sobic001G195200 Sobic001G195200 Sobic002G395300--Sobic001G195200 Sobic009G144700 Sobic009G144700 Sobic002G395300--Sobic009G144700 Sobic009G032000 Sobic009G032000 Sobic002G395300--Sobic009G032000 Sobic001G259700--Sobic006G263600 Sobic009G141500 Sobic009G141500 Sobic001G259700--Sobic009G141500 Sobic001G259700--Sobic001G259600 Sobic002G328400 Sobic002G328400 Sobic001G259700--Sobic002G328400 Sobic001G259700--Sobic004G169200 Sobic001G259700--Sobic004G191400 Sobic001G259700--Sobic001G449700 Sobic002G405600 Sobic002G405600 Sobic001G259700--Sobic002G405600 Sobic001G079300 Sobic001G079300 Sobic001G259700--Sobic001G079300 Sobic002G220000 Sobic002G220000 Sobic003G093000--Sobic002G220000 Sobic003G092900 Sobic003G092900 Sobic003G093000--Sobic003G092900 Sobic002G189100 Sobic002G189100 Sobic003G093000--Sobic002G189100 Sobic004G222500 Sobic004G222500 Sobic003G093000--Sobic004G222500 Sobic003G428700 Sobic003G428700 Sobic003G093000--Sobic003G428700 Sobic003G093000--Sobic004G191400 Sobic003G228900 Sobic003G228900 Sobic003G093000--Sobic003G228900 Sobic009G122400 Sobic009G122400 Sobic003G093000--Sobic009G122400 Sobic010G259300 Sobic010G259300 Sobic003G093000--Sobic010G259300 Sobic004G169200--Sobic002G395300 Sobic002G358300 Sobic002G358300 Sobic004G169200--Sobic002G358300 Sobic004G169200--Sobic003G428700 Sobic004G169200--Sobic006G263600 Sobic004G169200--Sobic004G191400 Sobic004G169200--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic004G169200--Sobic010G209200 Sobic004G169200--Sobic002G220000 Sobic002G339000 Sobic002G339000 Sobic004G169200--Sobic002G339000 Sobic001G320900 Sobic001G320900 Sobic009G036000--Sobic001G320900 Sobic009G036100 Sobic009G036100 Sobic009G036000--Sobic009G036100 Sobic009G036000--Sobic009G247900 Sobic009G036000--Sobic001G383700 Sobic003G364600 Sobic003G364600 Sobic009G036000--Sobic003G364600 Sobic007G074000 Sobic007G074000 Sobic009G036000--Sobic007G074000 Sobic001G308300 Sobic001G308300 Sobic009G036000--Sobic001G308300 Sobic001G391500 Sobic001G391500 Sobic009G036000--Sobic001G391500 Sobic009G036000--Sobic004G169200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.