Gene annotation
Transcriptome id Sobic.007G227500.1
Synonym Sb07g029210
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5YJR9
Pfam -
Panther DB PTHR33868 PTHR33868:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46550 : -
RAP-DB (Rice) LOC_Os08g37690.1 : expressed protein
MaizeGDB (Corn) Zm00025a004926
Brachypodium -
Barley -
Wheat TraesCS7D02G051500 , TraesCS4B02G301700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.006G094800 - -
3 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
4 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
5 Sobic.009G161700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@COX VIIa, putative, expressed -
6 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.009G207800 expressed protein -
8 Sobic.001G020200 ZOS3-24 - C2H2 zinc finger protein, expressed -
9 Sobic.009G027200 tetraspanin family protein, putative, expressed -
10 Sobic.008G191200 ATPase 3, putative, expressed -
11 Sobic.003G358100 O-fucosyltransferase family protein(PubMedID : 26465154)@growth regulator related protein, putative, expressed -
12 Sobic.001G237100 lectin-like receptor kinase, putative, expressed -
13 Sobic.003G268800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.001G317700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.009G072300 - -
16 Sobic.006G164500 protein kinase domain containing protein, expressed -
17 Sobic.009G134450 - -
18 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
19 Sobic.010G224100 expressed protein -
20 Sobic.003G415900 -(PubMedID : 26465154)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -


Gene co-expression network
sample Sobic007G227500 Sobic007G227500 Sobic004G338200 Sobic004G338200 Sobic007G227500--Sobic004G338200 Sobic006G094800 Sobic006G094800 Sobic007G227500--Sobic006G094800 Sobic004G243000 Sobic004G243000 Sobic007G227500--Sobic004G243000 Sobic008G040800 Sobic008G040800 Sobic007G227500--Sobic008G040800 Sobic009G161700 Sobic009G161700 Sobic007G227500--Sobic009G161700 Sobic003G314200 Sobic003G314200 Sobic007G227500--Sobic003G314200 Sobic009G207800 Sobic009G207800 Sobic007G227500--Sobic009G207800 Sobic001G020200 Sobic001G020200 Sobic007G227500--Sobic001G020200 Sobic009G027200 Sobic009G027200 Sobic007G227500--Sobic009G027200 Sobic004G338200--Sobic001G020200 Sobic004G338200--Sobic004G243000 Sobic004G338200--Sobic003G314200 Sobic004G338200--Sobic007G227500 Sobic004G338200--Sobic008G040800 Sobic009G182500 Sobic009G182500 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic004G338200--Sobic009G161700 Sobic004G338200--Sobic006G094800 Sobic006G206600 Sobic006G206600 Sobic006G094800--Sobic006G206600 Sobic001G207301 Sobic001G207301 Sobic006G094800--Sobic001G207301 Sobic009G218700 Sobic009G218700 Sobic006G094800--Sobic009G218700 Sobic006G094800--Sobic003G314200 Sobic003G226600 Sobic003G226600 Sobic006G094800--Sobic003G226600 Sobic001G450900 Sobic001G450900 Sobic006G094800--Sobic001G450900 Sobic006G100150 Sobic006G100150 Sobic006G094800--Sobic006G100150 Sobic010G186900 Sobic010G186900 Sobic006G094800--Sobic010G186900 Sobic001G148000 Sobic001G148000 Sobic006G094800--Sobic001G148000 Sobic004G243000--Sobic004G338200 Sobic006G233800 Sobic006G233800 Sobic004G243000--Sobic006G233800 Sobic007G194400 Sobic007G194400 Sobic004G243000--Sobic007G194400 Sobic002G373900 Sobic002G373900 Sobic004G243000--Sobic002G373900 Sobic010G036400 Sobic010G036400 Sobic004G243000--Sobic010G036400 Sobic004G243000--Sobic003G314200 Sobic004G243000--Sobic003G268800 Sobic009G215400 Sobic009G215400 Sobic004G243000--Sobic009G215400 Sobic003G323800 Sobic003G323800 Sobic004G243000--Sobic003G323800 Sobic008G040800--Sobic003G314200 Sobic008G040800--Sobic009G027200 Sobic001G097800 Sobic001G097800 Sobic008G040800--Sobic001G097800 Sobic003G396050 Sobic003G396050 Sobic008G040800--Sobic003G396050 Sobic009G229500 Sobic009G229500 Sobic008G040800--Sobic009G229500 Sobic003G039800 Sobic003G039800 Sobic008G040800--Sobic003G039800 Sobic003G395800 Sobic003G395800 Sobic008G040800--Sobic003G395800 Sobic002G153600 Sobic002G153600 Sobic008G040800--Sobic002G153600 Sobic007G127200 Sobic007G127200 Sobic008G040800--Sobic007G127200 Sobic009G161700--Sobic001G020200 Sobic009G161700--Sobic004G338200 Sobic009G161700--Sobic009G182500 Sobic009G161700--Sobic003G314200 Sobic003G354050 Sobic003G354050 Sobic009G161700--Sobic003G354050 Sobic004G176950 Sobic004G176950 Sobic009G161700--Sobic004G176950 Sobic003G365500 Sobic003G365500 Sobic009G161700--Sobic003G365500 Sobic001G234733 Sobic001G234733 Sobic009G161700--Sobic001G234733 Sobic001G423600 Sobic001G423600 Sobic009G161700--Sobic001G423600 Sobic003G314200--Sobic008G040800 Sobic006G205800 Sobic006G205800 Sobic003G314200--Sobic006G205800 Sobic003G314200--Sobic006G094800 Sobic003G314200--Sobic001G148000 Sobic003G314200--Sobic003G226600 Sobic003G314200--Sobic009G027200 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic003G314200--Sobic004G338200 Sobic004G055300 Sobic004G055300 Sobic009G207800--Sobic004G055300 Sobic009G072300 Sobic009G072300 Sobic009G207800--Sobic009G072300 Sobic009G207800--Sobic006G094800 Sobic009G207800--Sobic007G227500 Sobic006G216500 Sobic006G216500 Sobic009G207800--Sobic006G216500 Sobic010G086400 Sobic010G086400 Sobic009G207800--Sobic010G086400 Sobic007G043750 Sobic007G043750 Sobic009G207800--Sobic007G043750 Sobic003G444900 Sobic003G444900 Sobic009G207800--Sobic003G444900 Sobic010G061300 Sobic010G061300 Sobic009G207800--Sobic010G061300 Sobic001G020200--Sobic004G338200 Sobic004G216900 Sobic004G216900 Sobic001G020200--Sobic004G216900 Sobic007G122500 Sobic007G122500 Sobic001G020200--Sobic007G122500 Sobic001G020200--Sobic009G161700 Sobic001G020200--Sobic009G182500 Sobic009G173300 Sobic009G173300 Sobic001G020200--Sobic009G173300 Sobic003G361100 Sobic003G361100 Sobic001G020200--Sobic003G361100 Sobic003G353800 Sobic003G353800 Sobic001G020200--Sobic003G353800 Sobic003G268700 Sobic003G268700 Sobic001G020200--Sobic003G268700 Sobic006G217400 Sobic006G217400 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201
Octagon: transcription factors


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