Gene annotation
Transcriptome id Sobic.003G415900.1,Sobic.003G415900.2
Synonym Sb03g044950,
Functional annotation - (PubMedID : 26465154)
"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
heavy metal-associated domain containing protein, expressed
UniProt A0A1B6Q823 , A0A1B6Q827
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF124
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19090 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os01g70710.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026153
Brachypodium KQK11376
Barley HORVU1Hr1G058350.2 , HORVU1Hr1G058350.3 , HORVU1Hr1G058350.1
Wheat TraesCS1A02G232800 , TraesCS1D02G234000 , TraesCS3A02G452100 , TraesCS3B02G489000 , TraesCS3D02G444600 , TraesCS1B02G245900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G227500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.004G045800 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.008G016850 - -
4 Sobic.003G444900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ankyrin repeat domain-containing protein 28, putative, expressed -
5 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.009G207800 expressed protein -
7 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
8 Sobic.001G271500 expressed protein -
9 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
10 Sobic.009G200300 expressed protein -
11 Sobic.007G170200 - -
12 Sobic.010G245900 - -
13 Sobic.008G191200 ATPase 3, putative, expressed -
14 Sobic.002G182800 expressed protein -
15 Sobic.003G198100 - -
16 Sobic.009G072300 - -
17 Sobic.009G253950 - -
18 Sobic.003G267300 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
19 Sobic.002G182900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G358100 O-fucosyltransferase family protein(PubMedID : 26465154)@growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic003G415900 Sobic003G415900 Sobic007G227500 Sobic007G227500 Sobic003G415900--Sobic007G227500 Sobic004G045800 Sobic004G045800 Sobic003G415900--Sobic004G045800 Sobic008G016850 Sobic008G016850 Sobic003G415900--Sobic008G016850 Sobic003G444900 Sobic003G444900 Sobic003G415900--Sobic003G444900 Sobic004G219700 Sobic004G219700 Sobic003G415900--Sobic004G219700 Sobic009G207800 Sobic009G207800 Sobic003G415900--Sobic009G207800 Sobic010G085400 Sobic010G085400 Sobic003G415900--Sobic010G085400 Sobic001G271500 Sobic001G271500 Sobic003G415900--Sobic001G271500 Sobic009G136100 Sobic009G136100 Sobic003G415900--Sobic009G136100 Sobic004G338200 Sobic004G338200 Sobic007G227500--Sobic004G338200 Sobic006G094800 Sobic006G094800 Sobic007G227500--Sobic006G094800 Sobic004G243000 Sobic004G243000 Sobic007G227500--Sobic004G243000 Sobic008G040800 Sobic008G040800 Sobic007G227500--Sobic008G040800 Sobic009G161700 Sobic009G161700 Sobic007G227500--Sobic009G161700 Sobic003G314200 Sobic003G314200 Sobic007G227500--Sobic003G314200 Sobic007G227500--Sobic009G207800 Sobic001G020200 Sobic001G020200 Sobic007G227500--Sobic001G020200 Sobic009G027200 Sobic009G027200 Sobic007G227500--Sobic009G027200 Sobic002G182800 Sobic002G182800 Sobic004G045800--Sobic002G182800 Sobic003G227600 Sobic003G227600 Sobic004G045800--Sobic003G227600 Sobic002G013966 Sobic002G013966 Sobic004G045800--Sobic002G013966 Sobic003G040800 Sobic003G040800 Sobic004G045800--Sobic003G040800 Sobic003G233900 Sobic003G233900 Sobic004G045800--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic004G045800--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic004G045800--Sobic009G216900 Sobic003G083000 Sobic003G083000 Sobic004G045800--Sobic003G083000 Sobic002G342100 Sobic002G342100 Sobic004G045800--Sobic002G342100 Sobic005G181600 Sobic005G181600 Sobic008G016850--Sobic005G181600 Sobic002G182900 Sobic002G182900 Sobic008G016850--Sobic002G182900 Sobic010G061300 Sobic010G061300 Sobic008G016850--Sobic010G061300 Sobic004G055300 Sobic004G055300 Sobic008G016850--Sobic004G055300 Sobic003G267300 Sobic003G267300 Sobic008G016850--Sobic003G267300 Sobic006G050550 Sobic006G050550 Sobic008G016850--Sobic006G050550 Sobic001G147800 Sobic001G147800 Sobic008G016850--Sobic001G147800 Sobic007G170200 Sobic007G170200 Sobic008G016850--Sobic007G170200 Sobic009G253950 Sobic009G253950 Sobic008G016850--Sobic009G253950 Sobic002G038733 Sobic002G038733 Sobic003G444900--Sobic002G038733 Sobic003G267700 Sobic003G267700 Sobic003G444900--Sobic003G267700 Sobic008G191200 Sobic008G191200 Sobic003G444900--Sobic008G191200 Sobic009G251700 Sobic009G251700 Sobic003G444900--Sobic009G251700 Sobic003G444900--Sobic004G219700 Sobic002G172000 Sobic002G172000 Sobic003G444900--Sobic002G172000 Sobic004G304700 Sobic004G304700 Sobic003G444900--Sobic004G304700 Sobic004G299300 Sobic004G299300 Sobic003G444900--Sobic004G299300 Sobic003G444900--Sobic010G061300 Sobic010G245900 Sobic010G245900 Sobic004G219700--Sobic010G245900 Sobic003G397400 Sobic003G397400 Sobic004G219700--Sobic003G397400 Sobic007G073750 Sobic007G073750 Sobic004G219700--Sobic007G073750 Sobic003G137900 Sobic003G137900 Sobic004G219700--Sobic003G137900 Sobic006G272700 Sobic006G272700 Sobic004G219700--Sobic006G272700 Sobic010G253500 Sobic010G253500 Sobic004G219700--Sobic010G253500 Sobic001G210250 Sobic001G210250 Sobic004G219700--Sobic001G210250 Sobic004G219700--Sobic003G083000 Sobic005G016900 Sobic005G016900 Sobic004G219700--Sobic005G016900 Sobic009G207800--Sobic004G055300 Sobic009G072300 Sobic009G072300 Sobic009G207800--Sobic009G072300 Sobic009G207800--Sobic006G094800 Sobic009G207800--Sobic007G227500 Sobic006G216500 Sobic006G216500 Sobic009G207800--Sobic006G216500 Sobic010G086400 Sobic010G086400 Sobic009G207800--Sobic010G086400 Sobic007G043750 Sobic007G043750 Sobic009G207800--Sobic007G043750 Sobic009G207800--Sobic003G444900 Sobic009G207800--Sobic010G061300 Sobic010G085400--Sobic002G182800 Sobic002G331450 Sobic002G331450 Sobic010G085400--Sobic002G331450 Sobic010G085400--Sobic009G128300 Sobic010G085400--Sobic003G040800 Sobic002G110200 Sobic002G110200 Sobic010G085400--Sobic002G110200 Sobic002G013900 Sobic002G013900 Sobic010G085400--Sobic002G013900 Sobic004G211301 Sobic004G211301 Sobic010G085400--Sobic004G211301 Sobic010G085400--Sobic003G233900 Sobic007G169600 Sobic007G169600 Sobic010G085400--Sobic007G169600 Sobic001G352700 Sobic001G352700 Sobic001G271500--Sobic001G352700 Sobic007G131700 Sobic007G131700 Sobic001G271500--Sobic007G131700 Sobic006G115300 Sobic006G115300 Sobic001G271500--Sobic006G115300 Sobic001G271500--Sobic003G137900 Sobic003G252300 Sobic003G252300 Sobic001G271500--Sobic003G252300 Sobic009G097300 Sobic009G097300 Sobic001G271500--Sobic009G097300 Sobic004G236550 Sobic004G236550 Sobic001G271500--Sobic004G236550 Sobic001G271500--Sobic004G219700 Sobic006G086100 Sobic006G086100 Sobic001G271500--Sobic006G086100 Sobic001G235500 Sobic001G235500 Sobic009G136100--Sobic001G235500 Sobic009G118600 Sobic009G118600 Sobic009G136100--Sobic009G118600 Sobic009G136100--Sobic004G236550 Sobic009G079300 Sobic009G079300 Sobic009G136100--Sobic009G079300 Sobic003G252400 Sobic003G252400 Sobic009G136100--Sobic003G252400 Sobic009G200300 Sobic009G200300 Sobic009G136100--Sobic009G200300 Sobic001G005700 Sobic001G005700 Sobic009G136100--Sobic001G005700 Sobic009G136100--Sobic004G211301 Sobic009G136100--Sobic006G115300
Octagon: transcription factors


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