Gene annotation
Transcriptome id Sobic.004G045800.2
Synonym AtRLP3, RLP3, Sb04g003930
Functional annotation phytosulfokine receptor precursor, putative, expressed
UniProt A0A1Z5RKY2
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF207
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G72300 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os02g05930.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK16405
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G182800 expressed protein -
2 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
3 Sobic.002G013966 - -
4 Sobic.003G040800 WRKY102, expressed -
5 Sobic.003G233900 - -
6 Sobic.009G128300 CUE domain containing protein, expressed -
7 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
9 Sobic.002G342100 no apical meristem protein, putative, expressed -
10 Sobic.001G075101 - -
11 Sobic.005G110487 - -
12 Sobic.002G331450 - -
13 Sobic.009G253950 - -
14 Sobic.001G509400 - -
15 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
16 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
17 Sobic.006G034650 - -
18 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
19 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
20 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic004G045800 Sobic004G045800 Sobic002G182800 Sobic002G182800 Sobic004G045800--Sobic002G182800 Sobic003G227600 Sobic003G227600 Sobic004G045800--Sobic003G227600 Sobic002G013966 Sobic002G013966 Sobic004G045800--Sobic002G013966 Sobic003G040800 Sobic003G040800 Sobic004G045800--Sobic003G040800 Sobic003G233900 Sobic003G233900 Sobic004G045800--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic004G045800--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic004G045800--Sobic009G216900 Sobic003G083000 Sobic003G083000 Sobic004G045800--Sobic003G083000 Sobic002G342100 Sobic002G342100 Sobic004G045800--Sobic002G342100 Sobic002G182800--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic001G075101 Sobic001G075101 Sobic002G182800--Sobic001G075101 Sobic002G331450 Sobic002G331450 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic010G085400 Sobic010G085400 Sobic002G182800--Sobic010G085400 Sobic002G182800--Sobic002G342100 Sobic003G227600--Sobic009G128300 Sobic003G227600--Sobic009G216900 Sobic003G227600--Sobic003G233900 Sobic003G227600--Sobic002G182800 Sobic003G227600--Sobic003G040800 Sobic003G227600--Sobic002G342100 Sobic003G227600--Sobic001G509400 Sobic003G227600--Sobic001G075101 Sobic003G227600--Sobic002G331450 Sobic002G013966--Sobic002G182800 Sobic002G013966--Sobic003G233900 Sobic002G013966--Sobic003G040800 Sobic002G013966--Sobic010G085400 Sobic002G013966--Sobic004G045800 Sobic002G013966--Sobic009G128300 Sobic002G013966--Sobic003G227600 Sobic004G257350 Sobic004G257350 Sobic002G013966--Sobic004G257350 Sobic002G013966--Sobic009G216900 Sobic001G106000 Sobic001G106000 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic004G285100 Sobic004G285100 Sobic003G040800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic009G000700 Sobic009G000700 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic009G128300--Sobic002G331450 Sobic008G044750 Sobic008G044750 Sobic009G128300--Sobic008G044750 Sobic003G079800 Sobic003G079800 Sobic009G128300--Sobic003G079800 Sobic009G128300--Sobic001G075101 Sobic009G216900--Sobic003G227600 Sobic009G216900--Sobic003G233900 Sobic009G216900--Sobic009G128300 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic009G216900--Sobic004G285100 Sobic009G216900--Sobic003G079800 Sobic007G169600 Sobic007G169600 Sobic003G083000--Sobic007G169600 Sobic003G083000--Sobic001G075101 Sobic003G083000--Sobic002G331450 Sobic002G037400 Sobic002G037400 Sobic003G083000--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic003G083000--Sobic006G203000 Sobic005G016900 Sobic005G016900 Sobic003G083000--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic003G083000--Sobic007G143100 Sobic002G325600 Sobic002G325600 Sobic003G083000--Sobic002G325600 Sobic007G143200 Sobic007G143200 Sobic003G083000--Sobic007G143200 Sobic002G342100--Sobic009G128300 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic002G342100--Sobic007G169600 Sobic002G342100--Sobic003G083000 Sobic007G153001 Sobic007G153001 Sobic002G342100--Sobic007G153001 Sobic002G342100--Sobic002G037400
Octagon: transcription factors


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