Gene annotation
Transcriptome id Sobic.006G034650.1
Synonym -
Functional annotation -
UniProt A0A1Z5RBX1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110487 - -
2 Sobic.007G101000 - -
3 Sobic.004G045800 phytosulfokine receptor precursor, putative, expressed -
4 Sobic.009G253950 - -
5 Sobic.003G040800 WRKY102, expressed -
6 Sobic.003G233900 - -
7 Sobic.009G128300 CUE domain containing protein, expressed -
8 Sobic.007G006000 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
9 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
10 Sobic.001G509400 - -
11 Sobic.008G044750 - -
12 Sobic.002G182800 expressed protein -
13 Sobic.002G342100 no apical meristem protein, putative, expressed -
14 Sobic.010G114800 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
15 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.004G285100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
18 Sobic.004G257350 - -
19 Sobic.003G066900 expressed protein -
20 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic006G034650 Sobic006G034650 Sobic005G110487 Sobic005G110487 Sobic006G034650--Sobic005G110487 Sobic007G101000 Sobic007G101000 Sobic006G034650--Sobic007G101000 Sobic004G045800 Sobic004G045800 Sobic006G034650--Sobic004G045800 Sobic009G253950 Sobic009G253950 Sobic006G034650--Sobic009G253950 Sobic003G040800 Sobic003G040800 Sobic006G034650--Sobic003G040800 Sobic003G233900 Sobic003G233900 Sobic006G034650--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic006G034650--Sobic009G128300 Sobic007G006000 Sobic007G006000 Sobic006G034650--Sobic007G006000 Sobic001G106000 Sobic001G106000 Sobic006G034650--Sobic001G106000 Sobic005G110487--Sobic006G034650 Sobic005G110487--Sobic007G101000 Sobic005G110487--Sobic004G045800 Sobic002G342100 Sobic002G342100 Sobic005G110487--Sobic002G342100 Sobic005G110487--Sobic009G128300 Sobic006G069200 Sobic006G069200 Sobic005G110487--Sobic006G069200 Sobic002G182800 Sobic002G182800 Sobic005G110487--Sobic002G182800 Sobic003G083000 Sobic003G083000 Sobic005G110487--Sobic003G083000 Sobic001G509400 Sobic001G509400 Sobic005G110487--Sobic001G509400 Sobic007G101000--Sobic005G110487 Sobic007G101000--Sobic006G034650 Sobic008G041600 Sobic008G041600 Sobic007G101000--Sobic008G041600 Sobic005G181600 Sobic005G181600 Sobic007G101000--Sobic005G181600 Sobic008G041450 Sobic008G041450 Sobic007G101000--Sobic008G041450 Sobic005G071500 Sobic005G071500 Sobic007G101000--Sobic005G071500 Sobic001G216900 Sobic001G216900 Sobic007G101000--Sobic001G216900 Sobic007G101000--Sobic001G509400 Sobic008G044750 Sobic008G044750 Sobic007G101000--Sobic008G044750 Sobic004G045800--Sobic002G182800 Sobic003G227600 Sobic003G227600 Sobic004G045800--Sobic003G227600 Sobic002G013966 Sobic002G013966 Sobic004G045800--Sobic002G013966 Sobic004G045800--Sobic003G040800 Sobic004G045800--Sobic003G233900 Sobic004G045800--Sobic009G128300 Sobic009G216900 Sobic009G216900 Sobic004G045800--Sobic009G216900 Sobic004G045800--Sobic003G083000 Sobic004G045800--Sobic002G342100 Sobic009G253950--Sobic003G233900 Sobic009G253950--Sobic003G040800 Sobic003G079800 Sobic003G079800 Sobic009G253950--Sobic003G079800 Sobic009G253950--Sobic009G216900 Sobic009G253950--Sobic009G128300 Sobic009G253950--Sobic002G182800 Sobic009G000700 Sobic009G000700 Sobic009G253950--Sobic009G000700 Sobic004G285100 Sobic004G285100 Sobic009G253950--Sobic004G285100 Sobic009G253950--Sobic008G044750 Sobic003G040800--Sobic001G106000 Sobic003G040800--Sobic003G233900 Sobic003G040800--Sobic002G182800 Sobic003G040800--Sobic009G128300 Sobic003G040800--Sobic003G227600 Sobic003G040800--Sobic009G216900 Sobic003G040800--Sobic004G285100 Sobic003G017200 Sobic003G017200 Sobic003G040800--Sobic003G017200 Sobic003G040800--Sobic001G509400 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic009G128300--Sobic002G182800 Sobic009G128300--Sobic003G233900 Sobic009G128300--Sobic003G227600 Sobic009G128300--Sobic001G509400 Sobic009G128300--Sobic002G342100 Sobic002G331450 Sobic002G331450 Sobic009G128300--Sobic002G331450 Sobic009G128300--Sobic008G044750 Sobic009G128300--Sobic003G079800 Sobic001G075101 Sobic001G075101 Sobic009G128300--Sobic001G075101 Sobic009G099050 Sobic009G099050 Sobic007G006000--Sobic009G099050 Sobic003G078600 Sobic003G078600 Sobic007G006000--Sobic003G078600 Sobic010G233300 Sobic010G233300 Sobic007G006000--Sobic010G233300 Sobic002G347800 Sobic002G347800 Sobic007G006000--Sobic002G347800 Sobic010G061300 Sobic010G061300 Sobic007G006000--Sobic010G061300 Sobic007G006000--Sobic006G034650 Sobic008G043450 Sobic008G043450 Sobic007G006000--Sobic008G043450 Sobic003G367350 Sobic003G367350 Sobic007G006000--Sobic003G367350 Sobic010G091366 Sobic010G091366 Sobic007G006000--Sobic010G091366 Sobic001G106000--Sobic003G040800 Sobic001G106000--Sobic003G017200 Sobic001G106000--Sobic003G233900 Sobic001G106000--Sobic004G285100 Sobic001G106000--Sobic009G128300 Sobic002G023900 Sobic002G023900 Sobic001G106000--Sobic002G023900 Sobic001G430700 Sobic001G430700 Sobic001G106000--Sobic001G430700 Sobic001G106000--Sobic003G227600 Sobic007G153001 Sobic007G153001 Sobic001G106000--Sobic007G153001
Octagon: transcription factors


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