Gene annotation
Transcriptome id Sobic.003G444900.1
Synonym XBAT31, Sb03g047430
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ankyrin repeat domain-containing protein 28, putative, expressed
UniProt C5XJE9
Pfam PF12796
Panther DB PTHR24128 PTHR24128:SF20
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28840 : XB3 ortholog 1 in Arabidopsis thaliana
RAP-DB (Rice) LOC_Os05g02130.1 : ankyrin repeat domain-containing protein 28, putative, expressed
MaizeGDB (Corn) Zm00025a021114 , Zm00025a053246 , Zm00025a025818 , Zm00025a038258 , Zm00025a040940 , Zm00025a003154
Brachypodium -
Barley HORVU1Hr1G005260.4 , HORVU1Hr1G005260.5 , HORVU1Hr1G005260.6 , HORVU1Hr1G005260.7 , HORVU1Hr1G005260.1 , HORVU1Hr1G005260.17 , HORVU1Hr1G005260.14 , HORVU1Hr1G005260.10 , HORVU1Hr1G005260.11 , HORVU3Hr1G116350.1 , HORVU3Hr1G116350.3 , HORVU3Hr1G116350.2 , HORVU3Hr1G116350.5 , HORVU3Hr1G116350.4 , HORVU1Hr1G005260.18 , HORVU1Hr1G005260.19 , HORVU1Hr1G005260.16 , HORVU1Hr1G005260.15 , HORVU1Hr1G005260.12 , HORVU1Hr1G005260.13 , HORVU1Hr1G005260.8 , HORVU1Hr1G005260.9 , HORVU1Hr1G005260.2 , HORVU1Hr1G005260.3
Wheat TraesCS1A02G034300 , TraesCS1A02G034300 , TraesCS3B02G609500 , TraesCS3D02G537900 , TraesCS3A02G532700 , TraesCS1D02G035300 , TraesCS1B02G050200 , TraesCS1B02G050200 , TraesCS1B02G050200 , TraesCS1D02G035300
Populus -


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cDNA sequences
Sobic.003G444900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G038733 - -
2 Sobic.003G267700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.008G191200 ATPase 3, putative, expressed -
4 Sobic.009G251700 DNA ligase, putative, expressed -
5 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.002G172000 similar to Os09g0325700 protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
7 Sobic.004G304700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin receptor-type protein kinase, putative, expressed -
8 Sobic.004G299300 protein kinase domain containing protein, expressed -
9 Sobic.010G061300 receptor protein kinase, putative, expressed -
10 Sobic.009G054450 - -
11 Sobic.001G134000 - -
12 Sobic.009G207800 expressed protein -
13 Sobic.006G246500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
14 Sobic.008G186300 receptor-like protein kinase HAIKU2 precursor, putative, expressed -
15 Sobic.010G086400 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
16 Sobic.002G107800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
17 Sobic.007G013800 OsMADS26 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.003G415900 -(PubMedID : 26465154)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
19 Sobic.006G107100 purine permease, putative, expressed -
20 Sobic.004G204300 cyclin, putative, expressed K06627: cyclin-A


Gene co-expression network
sample Sobic003G444900 Sobic003G444900 Sobic002G038733 Sobic002G038733 Sobic003G444900--Sobic002G038733 Sobic003G267700 Sobic003G267700 Sobic003G444900--Sobic003G267700 Sobic008G191200 Sobic008G191200 Sobic003G444900--Sobic008G191200 Sobic009G251700 Sobic009G251700 Sobic003G444900--Sobic009G251700 Sobic004G219700 Sobic004G219700 Sobic003G444900--Sobic004G219700 Sobic002G172000 Sobic002G172000 Sobic003G444900--Sobic002G172000 Sobic004G304700 Sobic004G304700 Sobic003G444900--Sobic004G304700 Sobic004G299300 Sobic004G299300 Sobic003G444900--Sobic004G299300 Sobic010G061300 Sobic010G061300 Sobic003G444900--Sobic010G061300 Sobic008G186300 Sobic008G186300 Sobic002G038733--Sobic008G186300 Sobic002G038733--Sobic002G172000 Sobic008G040900 Sobic008G040900 Sobic002G038733--Sobic008G040900 Sobic001G460300 Sobic001G460300 Sobic002G038733--Sobic001G460300 Sobic006G194600 Sobic006G194600 Sobic002G038733--Sobic006G194600 Sobic005G121200 Sobic005G121200 Sobic002G038733--Sobic005G121200 Sobic003G278700 Sobic003G278700 Sobic002G038733--Sobic003G278700 Sobic002G038733--Sobic004G219700 Sobic005G061000 Sobic005G061000 Sobic002G038733--Sobic005G061000 Sobic008G042300 Sobic008G042300 Sobic003G267700--Sobic008G042300 Sobic009G239700 Sobic009G239700 Sobic003G267700--Sobic009G239700 Sobic001G349300 Sobic001G349300 Sobic003G267700--Sobic001G349300 Sobic003G267700--Sobic003G444900 Sobic003G267700--Sobic008G191200 Sobic006G205800 Sobic006G205800 Sobic003G267700--Sobic006G205800 Sobic001G100200 Sobic001G100200 Sobic003G267700--Sobic001G100200 Sobic003G079466 Sobic003G079466 Sobic003G267700--Sobic003G079466 Sobic006G058400 Sobic006G058400 Sobic003G267700--Sobic006G058400 Sobic010G132100 Sobic010G132100 Sobic008G191200--Sobic010G132100 Sobic009G182500 Sobic009G182500 Sobic008G191200--Sobic009G182500 Sobic003G134100 Sobic003G134100 Sobic008G191200--Sobic003G134100 Sobic004G338200 Sobic004G338200 Sobic008G191200--Sobic004G338200 Sobic004G176950 Sobic004G176950 Sobic008G191200--Sobic004G176950 Sobic003G267100 Sobic003G267100 Sobic008G191200--Sobic003G267100 Sobic009G223400 Sobic009G223400 Sobic008G191200--Sobic009G223400 Sobic009G025800 Sobic009G025800 Sobic008G191200--Sobic009G025800 Sobic006G094800 Sobic006G094800 Sobic008G191200--Sobic006G094800 Sobic002G334100 Sobic002G334100 Sobic009G251700--Sobic002G334100 Sobic002G321200 Sobic002G321200 Sobic009G251700--Sobic002G321200 Sobic008G174850 Sobic008G174850 Sobic009G251700--Sobic008G174850 Sobic003G015700 Sobic003G015700 Sobic009G251700--Sobic003G015700 Sobic002G075400 Sobic002G075400 Sobic009G251700--Sobic002G075400 Sobic004G341600 Sobic004G341600 Sobic009G251700--Sobic004G341600 Sobic007G132300 Sobic007G132300 Sobic009G251700--Sobic007G132300 Sobic005G075700 Sobic005G075700 Sobic009G251700--Sobic005G075700 Sobic004G259800 Sobic004G259800 Sobic009G251700--Sobic004G259800 Sobic010G245900 Sobic010G245900 Sobic004G219700--Sobic010G245900 Sobic003G397400 Sobic003G397400 Sobic004G219700--Sobic003G397400 Sobic007G073750 Sobic007G073750 Sobic004G219700--Sobic007G073750 Sobic003G137900 Sobic003G137900 Sobic004G219700--Sobic003G137900 Sobic006G272700 Sobic006G272700 Sobic004G219700--Sobic006G272700 Sobic010G253500 Sobic010G253500 Sobic004G219700--Sobic010G253500 Sobic001G210250 Sobic001G210250 Sobic004G219700--Sobic001G210250 Sobic003G083000 Sobic003G083000 Sobic004G219700--Sobic003G083000 Sobic005G016900 Sobic005G016900 Sobic004G219700--Sobic005G016900 Sobic002G172000--Sobic002G038733 Sobic002G172000--Sobic004G219700 Sobic010G231900 Sobic010G231900 Sobic002G172000--Sobic010G231900 Sobic007G013800 Sobic007G013800 Sobic002G172000--Sobic007G013800 Sobic002G172000--Sobic010G245900 Sobic010G146500 Sobic010G146500 Sobic002G172000--Sobic010G146500 Sobic008G087500 Sobic008G087500 Sobic002G172000--Sobic008G087500 Sobic008G087800 Sobic008G087800 Sobic002G172000--Sobic008G087800 Sobic002G172000--Sobic008G186300 Sobic004G073600 Sobic004G073600 Sobic004G304700--Sobic004G073600 Sobic001G137900 Sobic001G137900 Sobic004G304700--Sobic001G137900 Sobic002G033550 Sobic002G033550 Sobic004G304700--Sobic002G033550 Sobic002G224900 Sobic002G224900 Sobic004G304700--Sobic002G224900 Sobic001G413300 Sobic001G413300 Sobic004G304700--Sobic001G413300 Sobic002G153600 Sobic002G153600 Sobic004G304700--Sobic002G153600 Sobic004G169401 Sobic004G169401 Sobic004G304700--Sobic004G169401 Sobic003G105200 Sobic003G105200 Sobic004G304700--Sobic003G105200 Sobic006G232100 Sobic006G232100 Sobic004G304700--Sobic006G232100 Sobic004G128100 Sobic004G128100 Sobic004G299300--Sobic004G128100 Sobic009G105500 Sobic009G105500 Sobic004G299300--Sobic009G105500 Sobic004G299300--Sobic006G058400 Sobic004G087700 Sobic004G087700 Sobic004G299300--Sobic004G087700 Sobic003G267300 Sobic003G267300 Sobic004G299300--Sobic003G267300 Sobic003G413600 Sobic003G413600 Sobic004G299300--Sobic003G413600 Sobic003G279700 Sobic003G279700 Sobic004G299300--Sobic003G279700 Sobic009G140150 Sobic009G140150 Sobic004G299300--Sobic009G140150 Sobic009G027200 Sobic009G027200 Sobic004G299300--Sobic009G027200 Sobic007G006000 Sobic007G006000 Sobic010G061300--Sobic007G006000 Sobic004G055300 Sobic004G055300 Sobic010G061300--Sobic004G055300 Sobic002G325000 Sobic002G325000 Sobic010G061300--Sobic002G325000 Sobic010G244800 Sobic010G244800 Sobic010G061300--Sobic010G244800 Sobic008G043450 Sobic008G043450 Sobic010G061300--Sobic008G043450 Sobic003G373700 Sobic003G373700 Sobic010G061300--Sobic003G373700 Sobic001G440401 Sobic001G440401 Sobic010G061300--Sobic001G440401 Sobic002G168750 Sobic002G168750 Sobic010G061300--Sobic002G168750 Sobic005G183900 Sobic005G183900 Sobic010G061300--Sobic005G183900
Octagon: transcription factors


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